Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3644 Erigeron canadensis HOM05D006583 ORTHO05D008134 6.6e-290 1000.0 498 100.0
CSS0045478 Camellia sinensis var. sinensis HOM05D006583 ORTHO05D008134 2.7e-25 120.9 181 38.1
TPR.G13692 Trifolium pratense HOM05D006583 ORTHO05D008134 3.5e-25 120.6 190 36.3
Ca_13385_v3 Cicer arietinum L. HOM05D006583 ORTHO05D008134 4.6e-25 120.2 190 36.3
Gohir.A01G113700 Gossypium hirsutum HOM05D006583 ORTHO05D008134 6.0e-25 119.8 191 36.6
Gohir.D01G101500 Gossypium hirsutum HOM05D006583 ORTHO05D008134 6.0e-25 119.8 191 36.6
Lj5g0011733 Lotus japonicus HOM05D006583 ORTHO05D008134 6.0e-25 119.8 191 34.6
arahy.Tifrunner.gnm1.ann1.IRD816 Arachis hypogaea HOM05D006583 ORTHO05D008134 1.0e-24 119.0 196 36.2
Duzib093G0899 Durio zibethinus HOM05D006583 ORTHO05D008134 1.0e-24 119.0 191 37.2
Actinidia15372 Actinidia chinensis HOM05D006583 ORTHO05D008134 1.3e-24 118.6 181 37.6
Dinv31797 Davidia involucrata HOM05D006583 ORTHO05D008134 1.3e-24 118.6 191 35.6
Gorai.002G126000 Gossypium raimondii HOM05D006583 ORTHO05D008134 1.3e-24 118.6 191 36.6
Peaxi162Scf00189g00133 Petunia axillaris HOM05D001685 ORTHO05D009095 1.8e-24 118.2 166 40.4
Thecc.08G035300 Theobroma cacao HOM05D006583 ORTHO05D008134 1.8e-24 118.2 178 37.6
Dinv39470 Davidia involucrata HOM05D006583 ORTHO05D008134 3.0e-24 117.5 198 35.4
Ciclev10002444m.g Citrus clementina HOM05D006583 ORTHO05D008134 3.9e-24 117.1 161 38.5
Psat6g006360 Pisum sativum HOM05D006583 ORTHO05D008134 3.9e-24 117.1 166 38.0
VMungo1309G1713 Vigna mungo HOM05D006583 ORTHO05D008134 3.9e-24 117.1 196 35.2
Haze_22568 Corylus avellana HOM05D006583 ORTHO05D008134 5.1e-24 116.7 191 35.6
Medtr1g019870 Medicago truncatula HOM05D006583 ORTHO05D008134 5.1e-24 116.7 190 35.8
GSVIVG01009797001 Vitis vinifera HOM05D006583 ORTHO05D008134 5.1e-24 116.7 191 35.1
MSTRG.1241 Avicennia marina HOM05D006583 ORTHO05D008134 1.1e-23 115.5 191 34.6
Glyma.04G028200 Glycine max HOM05D006583 ORTHO05D008134 1.1e-23 115.5 181 35.9
Phvul.009G013100 Phaseolus vulgaris HOM05D006583 ORTHO05D008134 1.1e-23 115.5 196 35.2
Cc10_g02290 Coffea canephora HOM05D006583 ORTHO05D008134 1.5e-23 115.2 181 37.0
QL02p010374 Quercus lobata HOM05D006583 ORTHO05D008134 1.5e-23 115.2 191 35.6
QL02p010412 Quercus lobata HOM05D006583 ORTHO05D008134 1.5e-23 115.2 191 35.6
SalBow7G0241 Salvia bowleyana HOM05D006583 ORTHO05D008134 1.5e-23 115.2 144 42.4
Glyma.06G028400 Glycine max HOM05D006583 ORTHO05D008134 1.9e-23 114.8 191 34.0
HPP92_015882 Vanilla planifolia HOM05D006583 ORTHO05D008134 1.9e-23 114.8 181 35.4
AT1G06060 Arabidopsis thaliana HOM05D006583 ORTHO05D008134 4.3e-23 113.6 196 34.2
PGR031G1646 Punica granatum HOM05D006583 ORTHO05D008134 4.3e-23 113.6 196 34.2
BcaB03g13442 Brassica carinata HOM05D006583 ORTHO05D008134 7.4e-23 112.8 196 34.7
Duzib041G0648 Durio zibethinus HOM05D006583 ORTHO05D008134 7.4e-23 112.8 191 34.6
Aqoxy5G01518 Aquilegia oxysepala HOM05D006583 ORTHO05D008134 1.6e-22 111.7 169 37.3
CARHR005580 Cardamine hirsuta HOM05D006583 ORTHO05D008134 1.6e-22 111.7 191 33.0
Sp1g04870 Schrenkiella parvula HOM05D006583 ORTHO05D008134 1.6e-22 111.7 196 33.2
TAR376G0698 Trochodendron aralioides HOM05D006583 ORTHO05D008134 1.6e-22 111.7 150 41.3
THA.LOC104798636 Tarenaya hassleriana HOM05D006583 ORTHO05D008134 2.1e-22 111.3 181 35.4
Thhalv10008762m.g Eutrema salsugineum HOM05D006583 ORTHO05D008134 2.8e-22 110.9 196 33.7
CiPaw.07G155600 Carya illinoinensis HOM05D006583 ORTHO05D008134 3.7e-22 110.5 181 35.4
SEGI_39793 Sequoiadendron giganteum HOM05D006583 ORTHO05D008134 3.7e-22 110.5 146 39.0
Hma1.2p1_0469F.1_g158810 Hydrangea macrophylla HOM05D006583 ORTHO05D008134 4.8e-22 110.2 178 36.5
Lalb_Chr11g0062151 Lupinus albus HOM05D006583 ORTHO05D008134 8.1e-22 109.4 191 34.0
Sabra02G0023600 Salix brachista HOM05D001685 ORTHO05D008134 8.1e-22 109.4 180 35.0
AL1G16010 Arabidopsis lyrata HOM05D006583 ORTHO05D008134 1.1e-21 109.0 196 32.7
SEGI_23693 Sequoiadendron giganteum HOM05D006583 ORTHO05D008134 1.1e-21 109.0 145 38.6
CsaV3_3G045530 Cucumis sativus L. HOM05D006583 ORTHO05D008134 1.4e-21 108.6 165 37.0
TAR068G0005 Trochodendron aralioides HOM05D000284 ORTHO05D008134 1.4e-21 108.6 163 38.0
CDE06G0069 Ceratophyllum demersum HOM05D006583 ORTHO05D008134 1.8e-21 108.2 169 37.3
Eucgr.F01851 Eucalyptus grandis HOM05D006583 ORTHO05D008134 1.8e-21 108.2 194 33.5
Manes.18G019300 Manihot esculenta HOM05D006583 ORTHO05D008134 1.8e-21 108.2 190 34.2
Sopen04g034500 Solanum pennellii HOM05D006583 ORTHO05D008134 1.8e-21 108.2 155 40.0
MELO3C003787.2 Cucumis melo HOM05D006583 ORTHO05D008134 2.4e-21 107.8 165 36.4
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 2.4e-21 107.8 169 38.5
Hund26881 Selenicereus undatus HOM05D006583 ORTHO05D008134 3.1e-21 107.5 181 36.5
PGSC0003DMG401003705 Solanum tuberosum HOM05D006583 ORTHO05D008134 3.1e-21 107.5 169 37.9
CANSAT25G2309 Cannabis sativa HOM05D006583 ORTHO05D008134 4.0e-21 107.1 151 36.4
CAN.G851.29 Capsicum annuum HOM05D006583 ORTHO05D008134 4.0e-21 107.1 148 40.5
SGA_v2.0_scaffold11G05849 Striga asiatica HOM05D006583 ORTHO05D008134 4.0e-21 107.1 180 36.1
C08p02370 Brassica napus HOM05D006583 ORTHO05D008134 5.3e-21 106.7 191 31.9
BolC8t47029H Brassica oleracea HOM05D006583 ORTHO05D008134 5.3e-21 106.7 191 31.9
BraA08t35521Z Brassica rapa HOM05D006583 ORTHO05D008134 6.9e-21 106.3 191 31.9
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 6.9e-21 106.3 169 37.3
EL10Ac1g00579 Beta vulgaris HOM05D006583 ORTHO05D008134 9.0e-21 105.9 191 33.0
Os01g0775600 Oryza sativa ssp. japonica HOM05D006583 ORTHO05D008134 9.0e-21 105.9 195 31.8
Potri.002G029700 Populus trichocarpa HOM05D006583 ORTHO05D008134 9.0e-21 105.9 151 38.4
Rhsim06G0027600 Rhododendron simsii HOM05D006583 ORTHO05D008134 1.2e-20 105.5 147 40.1
DCAR_009954 Daucus carota HOM05D006583 ORTHO05D008134 1.5e-20 105.1 152 37.5
FAN20G0107 Fragaria x ananassa HOM05D006583 ORTHO05D008134 1.5e-20 105.1 194 32.5
A08p36140 Brassica napus HOM05D006583 ORTHO05D008134 2.0e-20 104.8 191 31.9
RcHm_v2.0_Chr6g0301961 Rosa chinensis HOM05D006583 ORTHO05D008134 3.4e-20 104.0 194 31.4
Sed0026661 Sechium edule HOM05D004346 ORTHO05D009095 3.4e-20 104.0 181 33.7
FvH4_2g38860 Fragaria vesca HOM05D006583 ORTHO05D008134 4.5e-20 103.6 194 32.0
ECA246G3248 Erigeron canadensis HOM05D006583 ORTHO05D008134 5.8e-20 103.2 191 34.0
MD08G1023000 Malus domestica HOM05D006583 ORTHO05D008134 5.8e-20 103.2 177 34.5
Sc02g0005320 Simmondsia chinensis HOM05D006583 ORTHO05D008134 5.8e-20 103.2 146 41.1
Carub.0001s0539 Capsella rubella HOM05D006583 ORTHO05D008134 7.6e-20 102.8 196 33.2
AUR62014454 Chenopodium quinoa HOM05D006583 ORTHO05D008134 7.6e-20 102.8 144 40.3
AUR62034544 Chenopodium quinoa HOM05D006583 ORTHO05D008134 7.6e-20 102.8 144 40.3
Lj4A32T64 Lonicera japonica HOM05D006583 ORTHO05D008134 7.6e-20 102.8 181 33.7
Lalb_Chr23g0266401 Lupinus albus HOM05D006583 ORTHO05D008134 7.6e-20 102.8 168 35.1
MD15G1020700 Malus domestica HOM05D006583 ORTHO05D008134 1.0e-19 102.4 189 32.8
Mapoly0001s0037 Marchantia polymorpha HOM05D006583 ORTHO05D008134 1.0e-19 102.4 155 38.1
TWI36G1724 Tripterygium wilfordii HOM05D006583 ORTHO05D008134 1.0e-19 102.4 168 33.9
FAN15G3353 Fragaria x ananassa HOM05D006583 ORTHO05D008134 1.3e-19 102.1 205 31.2
HanXRQChr03g0069701 Helianthus annuus HOM05D006583 ORTHO05D008134 1.3e-19 102.1 191 34.6
PSO541G0494 Papaver somniferum HOM05D006583 ORTHO05D008134 6.5e-19 99.8 155 36.1
Pp3c15_18970 Physcomitrium patens HOM05D006583 ORTHO05D008134 6.5e-19 99.8 147 37.4
unitig_578.g16694 Utricularia gibba HOM05D006583 ORTHO05D008134 1.4e-18 98.6 146 38.4
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 1.9e-18 98.2 150 38.7
CDE07G0605 Ceratophyllum demersum HOM05D006583 ORTHO05D008134 2.5e-18 97.8 140 38.6
Pp3c9_8180 Physcomitrium patens HOM05D006583 ORTHO05D008134 2.5e-18 97.8 147 36.7
arahy.Tifrunner.gnm1.ann1.F32EHA Arachis hypogaea HOM05D006583 ORTHO05D008134 3.2e-18 97.4 164 36.6
PSO675G6535 Papaver somniferum HOM05D006583 ORTHO05D008134 4.2e-18 97.1 155 35.5
HanXRQChr05g0149481 Helianthus annuus HOM05D006583 ORTHO05D008134 9.3e-18 95.9 168 34.5
unitig_85.g27214 Utricularia gibba HOM05D006583 ORTHO05D008134 9.3e-18 95.9 144 39.6
vmacro21691 Vaccinium macrocarpon HOM05D006583 ORTHO05D008134 2.7e-17 94.4 196 31.1
TWI56G0908 Tripterygium wilfordii HOM05D006583 ORTHO05D008134 4.6e-17 93.6 177 31.6
Glyma.14G070300 Glycine max HOM05D006583 ORTHO05D008134 6.0e-17 93.2 181 31.5
ATR0665G303 Amborella trichopoda HOM05D006583 ORTHO05D008134 1.0e-16 92.4 146 32.9
Lsat_1_v5_gn_5_25641 Lactuca sativa HOM05D006583 ORTHO05D008134 1.3e-16 92.0 165 35.2
MBI04_g18961_MAGBIO Magnolia biondii HOM05D006583 ORTHO05D008134 1.3e-16 92.0 220 29.5
Sabra05G0179700 Salix brachista HOM05D006583 ORTHO05D008134 2.3e-16 91.3 196 32.1
ClCG05G018650 Citrullus lanatus HOM05D001685 ORTHO05D009095 3.9e-16 90.5 150 35.3
SGA_v2.0_scaffold11G05841 Striga asiatica HOM05D006583 ORTHO05D008134 3.9e-16 90.5 151 35.1
SGA_v2.0_scaffold201G41378 Striga asiatica HOM05D006583 ORTHO05D008134 5.1e-16 90.1 151 35.8
Nitab4.5_0001840g0010 Nicotiana tabacum HOM05D006583 ORTHO05D008134 6.7e-16 89.7 126 38.9
COL.COLO4_26225 Corchorus olitorius HOM05D006583 ORTHO05D008134 3.3e-15 87.4 161 32.9
SMO118G0197 Selaginella moellendorffii HOM05D006583 ORTHO05D008134 4.3e-15 87.0 156 34.0
Prupe.1G372300 Prunus persica HOM05D006583 ORTHO05D008134 7.4e-15 86.3 159 33.3
Glyma.17G254300 Glycine max HOM05D006583 ORTHO05D008134 9.6e-15 85.9 140 35.7
FAN27G2561 Fragaria x ananassa HOM05D001685 ORTHO05D009095 1.3e-14 85.5 166 33.1
Zm00001eb369980 Zea mays HOM05D006583 ORTHO05D008134 1.6e-14 85.1 127 34.6
Potri.005G233000 Populus trichocarpa HOM05D006583 ORTHO05D008134 1.4e-13 82.0 120 39.2
Aa31LG1G8200 Aethionema arabicum HOM05D006583 ORTHO05D008134 2.4e-13 81.3 139 33.1
Phvul.001G010600 Phaseolus vulgaris HOM05D006583 ORTHO05D008134 4.1e-13 80.5 180 29.4
Ah.02g110970 Amaranthus hybridus HOM05D006583 ORTHO05D008134 5.0e-11 73.6 188 28.2
Nitab4.5_0002156g0120 Nicotiana tabacum HOM05D006583 ORTHO05D008134 1.6e-09 68.6 95 40.0
ECA233G3825 Erigeron canadensis HOM05D023801 ORTHO05D187422 1.1e-07 62.4 80 41.2
ECA248G3851 Erigeron canadensis HOM05D023801 ORTHO05D187771 9.7e-07 59.3 29 86.2


User provided reference genes

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