Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 1.1e-146 523.5 289 100.0
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 2.6e-113 412.5 250 84.8
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 7.6e-113 411.0 250 84.8
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 1.1e-98 364.0 230 80.0
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 2.4e-98 362.8 250 79.6
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 3.4e-97 359.0 227 79.3
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 1.7e-96 356.7 227 79.7
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 2.2e-96 356.3 227 78.4
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 1.9e-95 353.2 250 72.0
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 1.2e-94 350.5 250 70.8
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 2.1e-94 349.7 227 78.0
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 2.7e-94 349.4 227 78.0
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 3.5e-94 349.0 228 75.0
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 4.6e-94 348.6 250 70.4
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 7.9e-94 347.8 228 75.0
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 1.0e-93 347.4 250 70.0
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 2.3e-93 346.3 259 69.5
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.0e-93 345.9 230 77.4
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 3.9e-93 345.5 221 76.0
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 3.9e-93 345.5 250 70.0
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 3.9e-93 345.5 250 71.6
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 3.9e-93 345.5 227 76.7
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 3.9e-93 345.5 250 71.2
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 5.1e-93 345.1 230 74.3
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 1.1e-92 344.0 228 76.3
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 3.3e-92 342.4 250 72.0
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 4.3e-92 342.0 228 74.1
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 7.4e-92 341.3 250 70.0
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 1.6e-91 340.1 250 69.2
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 2.8e-91 339.3 230 74.8
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 3.7e-91 339.0 230 74.3
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 6.3e-91 338.2 250 69.6
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 6.3e-91 338.2 250 68.4
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 6.3e-91 338.2 250 68.4
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 8.2e-91 337.8 230 73.9
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 1.1e-90 337.4 250 68.4
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 1.1e-90 337.4 227 74.4
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.4e-90 336.3 230 72.2
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 2.4e-90 336.3 227 72.7
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 3.1e-90 335.9 230 73.9
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 4.1e-90 335.5 250 68.0
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 5.3e-90 335.1 227 71.4
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 6.9e-90 334.7 227 74.0
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 6.9e-90 334.7 250 67.2
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 9.0e-90 334.3 227 72.2
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 1.5e-89 333.6 230 71.3
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 2.6e-89 332.8 227 72.2
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.3e-88 330.5 230 73.0
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.3e-88 330.5 250 67.6
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 2.2e-88 329.7 227 70.0
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 5.0e-88 328.6 227 71.8
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 8.5e-88 327.8 227 71.8
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 1.1e-87 327.4 262 66.8
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 1.4e-87 327.0 227 72.2
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 1.4e-87 327.0 227 72.2
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 1.4e-87 327.0 227 72.2
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.4e-87 327.0 227 72.2
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 1.9e-87 326.6 230 70.9
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 4.2e-87 325.5 227 71.8
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 7.2e-87 324.7 227 71.8
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 7.2e-87 324.7 227 72.2
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 9.4e-87 324.3 227 70.9
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 9.4e-87 324.3 227 70.0
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 9.4e-87 324.3 227 69.6
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 1.2e-86 323.9 250 67.2
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 1.6e-86 323.6 227 71.4
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 2.1e-86 323.2 227 71.4
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 3.6e-86 322.4 227 69.6
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 4.6e-86 322.0 227 70.0
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 7.9e-86 321.2 227 70.0
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 1.0e-85 320.9 226 68.6
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.0e-85 320.9 227 70.5
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 1.0e-85 320.9 227 71.8
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 3.0e-85 319.3 230 70.0
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 3.9e-85 318.9 230 68.3
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 5.1e-85 318.5 227 69.6
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 1.1e-84 317.4 227 70.5
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 2.5e-84 316.2 227 70.0
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 1.3e-83 313.9 261 64.4
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 2.8e-83 312.8 227 67.4
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 3.7e-83 312.4 281 59.8
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.8e-82 310.1 226 69.9
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 1.3e-80 303.9 235 66.8
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 1.7e-80 303.5 215 71.6
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 2.9e-80 302.8 226 69.9
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 3.8e-80 302.4 205 73.2
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 2.5e-79 299.7 204 73.0
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 1.6e-78 297.0 236 66.1
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 3.0e-77 292.7 220 63.6
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 5.7e-76 288.5 207 71.5
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 3.7e-75 285.8 234 63.7
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 4.8e-75 285.4 196 73.5
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 2.6e-73 279.6 250 60.8
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 1.9e-71 273.5 182 74.2
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 5.5e-71 271.9 182 74.2
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 3.6e-70 269.2 222 57.2
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.1e-68 264.2 227 62.1
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 3.7e-67 259.2 222 55.4
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 7.0e-66 255.0 180 70.0
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 2.0e-65 253.4 193 67.9
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 3.5e-65 252.7 228 55.3
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 1.3e-64 250.8 250 51.2
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 1.1e-63 247.7 159 77.4
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 3.6e-62 242.7 226 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 8.0e-62 241.5 221 52.9
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 1.8e-61 240.4 169 74.0
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 1.5e-60 237.3 171 69.6
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 3.7e-59 232.6 226 58.4
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.8e-58 230.3 196 65.3
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 2.9e-56 223.0 182 64.8
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 6.1e-54 215.3 182 59.9
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 2.9e-40 169.9 218 41.7
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 9.5e-39 164.9 118 66.9
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 1.1e-34 151.4 218 40.4
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 3.9e-32 142.9 207 34.8
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 4.3e-31 139.4 120 60.8
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 2.0e-28 130.6 207 45.9
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.4e-26 124.4 83 79.5
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 5.4e-26 122.5 234 38.5
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.7e-24 117.5 83 74.7
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.8e-21 107.5 82 62.2
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 8.9e-21 105.1 198 40.4
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 4.9e-19 99.4 64 76.6
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 1.7e-11 74.3 46 82.6


User provided reference genes

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