Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.5e-214 747.7 380 100.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.2e-190 669.8 370 92.4
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.4e-183 646.4 371 90.3
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 8.9e-162 573.9 349 83.4
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.2e-161 573.5 378 77.2
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 5.8e-161 571.2 377 77.5
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.5e-161 570.9 354 81.4
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.7e-160 568.5 392 77.0
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 4.9e-160 568.2 377 76.4
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.4e-159 566.6 378 76.5
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.9e-159 566.2 378 76.2
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 3.2e-159 565.5 380 73.9
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.2e-159 565.5 362 80.9
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.2e-159 565.5 378 75.7
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 5.4e-159 564.7 371 78.4
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 5.4e-159 564.7 375 78.1
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.1e-159 564.3 378 76.5
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.2e-158 563.5 378 74.3
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 2.7e-158 562.4 375 77.6
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.6e-158 561.6 378 75.9
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 6.0e-158 561.2 363 77.1
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 6.0e-158 561.2 378 75.7
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 7.8e-158 560.8 382 75.9
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.3e-157 560.1 385 76.6
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.3e-157 560.1 368 78.8
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.9e-157 558.5 362 78.5
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 6.6e-157 557.8 375 76.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-156 557.0 374 76.5
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.5e-156 556.6 374 76.2
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.5e-156 556.6 374 76.2
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.9e-156 556.2 368 77.4
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.9e-156 556.2 355 78.6
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.5e-156 555.8 378 74.9
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 3.3e-156 555.4 363 78.0
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 5.6e-156 554.7 375 76.3
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.3e-156 554.3 374 76.2
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.1e-155 552.7 374 75.9
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.8e-155 552.4 374 75.9
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 8.1e-155 550.8 374 76.2
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.8e-154 549.7 394 75.6
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.8e-154 547.7 389 74.0
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.8e-154 547.7 388 73.7
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.2e-153 547.0 400 71.8
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.5e-153 546.6 347 78.4
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.5e-153 546.6 337 78.6
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.5e-153 546.6 378 75.4
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.5e-153 546.6 364 76.6
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.5e-153 546.6 384 73.7
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.0e-153 546.2 388 73.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 2.6e-153 545.8 389 72.2
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.6e-153 545.8 368 76.4
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 3.4e-153 545.4 381 75.1
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 3.4e-153 545.4 389 73.0
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 5.8e-153 544.7 347 78.1
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.7e-152 543.1 385 73.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.9e-152 542.3 364 76.4
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 3.8e-152 542.0 361 75.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.9e-152 541.6 341 79.8
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 6.4e-152 541.2 356 76.1
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 6.4e-152 541.2 389 71.5
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 8.4e-152 540.8 377 73.7
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.9e-151 539.7 363 76.0
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 2.4e-151 539.3 380 73.4
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 2.4e-151 539.3 380 73.4
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 7.1e-151 537.7 383 73.9
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 7.1e-151 537.7 348 76.7
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 9.2e-151 537.3 367 75.2
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-150 537.0 341 77.1
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 3.5e-150 535.4 363 75.5
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 3.5e-150 535.4 383 72.8
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.0e-149 533.9 361 75.1
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.0e-149 533.9 366 74.9
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.3e-149 533.5 399 71.2
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.7e-149 533.1 394 72.8
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.7e-149 533.1 359 74.9
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.0e-149 532.3 386 72.0
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 6.6e-149 531.2 384 73.4
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 1.1e-148 530.4 387 70.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 1.1e-148 530.4 387 70.8
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.1e-148 530.4 379 72.0
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.5e-148 530.0 385 72.7
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.9e-148 529.6 386 71.5
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.5e-148 529.3 375 72.3
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 3.3e-148 528.9 351 75.5
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.6e-148 527.3 363 75.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.1e-147 526.2 382 72.5
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 2.1e-147 526.2 377 71.9
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 2.1e-147 526.2 359 74.1
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 2.1e-147 526.2 355 75.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 3.6e-147 525.4 330 77.6
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 4.7e-147 525.0 360 73.1
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 6.2e-147 524.6 370 72.7
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 8.1e-147 524.2 384 70.3
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 8.1e-147 524.2 362 74.6
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.1e-146 523.9 360 73.1
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.1e-146 522.3 369 72.6
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 3.1e-146 522.3 336 78.6
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 4.0e-146 521.9 379 70.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 6.9e-146 521.2 321 79.4
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.0e-146 520.8 347 76.7
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.2e-145 520.4 308 81.8
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.5e-145 520.0 347 76.4
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-145 520.0 316 79.4
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.6e-145 519.2 387 69.5
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.4e-145 518.8 394 68.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 7.6e-145 517.7 342 74.3
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-144 516.9 347 76.1
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 4.9e-144 515.0 387 69.3
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 4.9e-144 515.0 389 69.7
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 6.4e-144 514.6 355 73.8
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.6e-142 510.0 356 72.2
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.6e-142 510.0 329 76.0
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 3.5e-142 508.8 325 76.3
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 7.8e-142 507.7 407 67.6
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.3e-141 506.9 349 73.6
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.9e-141 505.4 375 71.5
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 7.3e-140 501.1 381 69.3
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.4e-138 496.9 351 71.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.4e-138 496.9 323 74.6
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 6.9e-138 494.6 349 71.6
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 7.6e-137 491.1 338 70.7
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 9.9e-137 490.7 369 70.2
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.2e-136 489.6 477 58.1
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.3e-133 479.6 325 74.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.5e-132 476.9 289 78.9
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.9e-132 476.5 308 73.7
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.4e-132 474.6 386 66.8
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.1e-131 473.0 271 83.8
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-130 469.9 310 77.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 9.3e-127 457.6 361 67.6
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 6.0e-126 454.9 341 63.6
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.1e-124 450.7 298 76.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 5.6e-124 448.4 390 65.4
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 5.6e-124 448.4 389 63.0
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.1e-123 446.4 310 73.9
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 2.1e-123 446.4 272 79.4
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 9.0e-122 441.0 338 64.8
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.2e-121 440.7 311 65.9
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 5.8e-121 438.3 318 65.7
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 2.2e-120 436.4 327 69.4
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.3e-117 426.4 259 80.3
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 5.1e-117 425.2 311 65.6
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 5.3e-114 415.2 336 63.1
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.9e-112 409.5 309 64.1
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.9e-111 406.8 352 61.6
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 1.2e-110 404.1 416 54.8
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.3e-104 384.0 221 84.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 7.2e-103 378.3 244 77.9
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 3.6e-102 375.9 378 57.1
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.8e-91 339.7 370 48.6
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 6.5e-88 328.6 221 69.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 8.5e-80 301.6 254 64.2
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.2e-65 254.6 150 80.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 8.0e-62 241.9 370 43.8
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 9.2e-58 228.4 173 64.2
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 4.4e-52 209.5 174 64.4
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 9.2e-42 175.3 164 56.1
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 9.6e-31 138.7 98 72.4
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 4.9e-27 126.3 320 28.8
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 3.5e-25 120.2 103 62.1
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.3e-22 111.7 332 27.1
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.6e-22 111.3 253 35.6
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 3.4e-20 103.6 331 26.6
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 9.9e-20 102.1 65 70.8
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.1e-17 94.4 395 24.6
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 6.7e-16 89.4 70 67.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 6.7e-16 89.4 70 67.1
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.5e-15 88.2 70 67.1
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.5e-15 87.4 76 61.8
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 5.6e-15 86.3 59 69.5
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.4e-12 77.0 92 54.3
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 4.9e-11 73.2 90 51.1
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 2.7e-09 67.4 39 79.5
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 8.7e-08 62.4 41 73.2
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.1e-07 62.0 144 29.2
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.5e-07 61.6 35 77.1
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.5e-07 61.6 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.9e-07 61.2 39 74.4
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 1.3e-06 58.5 50 62.0


User provided reference genes

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