Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.3e-198 696.0 322 100.0
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 4.9e-185 651.0 317 93.1
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.1e-181 639.8 317 92.1
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.2e-175 619.8 317 87.1
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 5.0e-174 614.4 320 87.8
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.1e-173 613.2 317 86.8
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.1e-173 613.2 317 86.4
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.1e-173 613.2 317 86.4
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.5e-173 612.1 339 83.5
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 3.3e-173 611.7 317 86.1
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 4.3e-173 611.3 317 86.1
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 2.1e-172 609.0 317 85.5
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.1e-172 609.0 341 82.4
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 2.1e-172 609.0 318 86.5
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.7e-172 607.8 318 86.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 4.7e-172 607.8 320 85.9
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 4.7e-172 607.8 318 86.2
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 8.0e-172 607.1 317 86.8
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 8.0e-172 607.1 320 85.3
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 8.0e-172 607.1 317 86.1
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 8.0e-172 607.1 317 86.4
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.1e-171 606.7 317 86.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.1e-171 606.7 317 86.8
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.4e-171 606.3 317 86.4
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.8e-171 605.9 320 85.3
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.8e-171 605.9 317 86.4
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 2.3e-171 605.5 316 85.8
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 3.1e-171 605.1 316 85.8
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 4.0e-171 604.7 316 86.1
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 4.0e-171 604.7 311 87.1
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 4.0e-171 604.7 317 85.5
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 4.0e-171 604.7 317 84.9
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 5.2e-171 604.4 317 84.9
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 6.8e-171 604.0 317 85.5
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 8.9e-171 603.6 315 86.3
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.2e-170 603.2 317 86.1
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.6e-170 602.1 315 85.4
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 2.6e-170 602.1 318 85.5
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 3.4e-170 601.7 316 84.5
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 3.4e-170 601.7 317 85.5
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 5.8e-170 600.9 325 83.7
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 5.8e-170 600.9 317 84.5
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 1.3e-169 599.7 316 86.1
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 2.9e-169 598.6 315 85.7
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.9e-169 598.6 315 86.0
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.9e-169 598.6 316 84.2
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 3.7e-169 598.2 318 85.2
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 8.3e-169 597.0 312 86.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 8.3e-169 597.0 321 84.1
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 8.3e-169 597.0 316 85.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.4e-168 596.3 318 83.6
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.9e-168 595.9 319 84.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.6e-167 592.8 318 84.6
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 4.6e-167 591.3 314 84.1
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 6.0e-167 590.9 319 83.7
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 6.0e-167 590.9 318 83.6
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.0e-166 590.1 314 84.1
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.0e-166 590.1 312 84.0
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.3e-166 589.7 312 84.3
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.3e-166 589.7 315 84.4
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.7e-166 589.3 315 85.1
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.3e-166 589.0 319 83.1
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 3.3e-165 585.1 312 84.3
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 3.3e-165 585.1 312 84.3
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 5.6e-165 584.3 312 84.3
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 5.6e-165 584.3 318 82.1
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 7.3e-165 583.9 318 82.1
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 9.5e-165 583.6 315 82.9
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.6e-164 582.8 314 83.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 2.1e-164 582.4 312 84.0
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 2.1e-164 582.4 312 84.0
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 3.6e-164 581.6 325 81.5
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.1e-163 580.1 314 83.8
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 1.4e-163 579.7 315 82.5
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.4e-163 579.7 313 83.4
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.8e-163 577.4 342 78.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 5.8e-162 574.3 321 82.2
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 5.8e-162 574.3 318 80.5
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.7e-161 571.6 317 80.1
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 7.1e-160 567.4 321 82.9
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 9.2e-160 567.0 341 76.8
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.1e-155 553.5 338 76.0
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 5.2e-155 551.2 317 78.2
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 4.9e-153 544.7 350 74.0
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.1e-151 539.3 321 79.1
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.1e-151 539.3 289 81.7
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 2.3e-150 535.8 325 76.3
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.3e-149 531.6 285 82.8
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 3.4e-146 521.9 318 75.8
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.6e-143 513.1 287 78.4
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.7e-142 509.6 311 72.3
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.5e-141 506.5 316 71.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.5e-141 505.8 311 72.0
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.3e-141 505.4 315 74.0
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 4.0e-139 498.4 314 69.1
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 3.1e-131 472.2 564 47.9
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.0e-129 467.2 315 65.7
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.3e-124 450.3 249 81.1
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 4.2e-104 382.1 192 88.0
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 7.2e-104 381.3 267 68.2
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.0e-102 375.9 278 65.5
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.1e-99 367.5 222 78.4
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.8e-92 342.8 352 44.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-84 317.4 313 45.7
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.2e-84 316.6 351 42.7
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.7e-84 315.8 314 46.2
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.3e-70 270.0 161 78.9
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.9e-59 233.8 186 59.7
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 6.0e-58 228.8 126 78.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 3.9e-57 226.1 331 39.0
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.6e-55 219.5 158 65.2
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 7.1e-51 205.3 129 74.4
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.6e-50 204.1 204 54.4
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 5.6e-48 195.7 196 45.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 9.6e-32 141.7 81 77.8
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 3.3e-24 116.7 72 70.8
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 6.7e-17 92.4 79 55.7
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 1.3e-12 78.2 74 56.8
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 3.2e-11 73.6 45 71.1
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 4.3e-08 63.2 116 31.0
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 1.3e-07 61.6 100 34.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 1.3e-07 61.6 35 71.4
VMungo0251G1525 Vigna mungo HOM05D000363 ORTHO05D000236 1.6e-07 61.2 122 29.5
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 2.1e-07 60.8 147 24.5
FAN16G1656 Fragaria x ananassa HOM05D000363 ORTHO05D000236 1.4e-06 58.2 100 34.0
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 1.4e-06 58.2 100 33.0
Glyma.13G182100 Glycine max HOM05D000363 ORTHO05D000236 1.8e-06 57.8 122 29.5
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 1.8e-06 57.8 62 51.6
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 1.8e-06 57.8 113 31.9
FAN21G0435 Fragaria x ananassa HOM05D000363 ORTHO05D000236 2.4e-06 57.4 124 33.1
Aqoxy4G01160 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 3.1e-06 57.0 124 29.0
FAN19G0844 Fragaria x ananassa HOM05D000363 ORTHO05D000236 3.1e-06 57.0 104 33.7
Nn1g06618 Nelumbo nucifera HOM05D000363 ORTHO05D000236 3.1e-06 57.0 132 30.3
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.1e-06 57.0 34 61.8
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 4.1e-06 56.6 119 31.1
FAN13G1163 Fragaria x ananassa HOM05D000363 ORTHO05D000236 4.1e-06 56.6 100 36.0
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.3e-06 56.2 171 29.8
FvH4_3g04781 Fragaria vesca HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 33.0
FvH4_5g27600 Fragaria vesca HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 35.0
FAN18G0326 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 36.0
FAN23G1950 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 34.0
FAN25G3617 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 33.0
FAN26G0454 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 34.0
RcHm_v2.0_Chr5g0007841 Rosa chinensis HOM05D000363 ORTHO05D000236 5.3e-06 56.2 100 33.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 6.9e-06 55.8 119 31.9
PSO339G5342 Papaver somniferum HOM05D000363 ORTHO05D000236 6.9e-06 55.8 100 32.0


User provided reference genes

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