Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.3e-42 176.0 91 100.0
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.8e-39 165.6 91 94.5
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 2.5e-38 161.8 91 89.0
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 2.5e-38 161.8 91 89.0
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 4.3e-38 161.0 91 90.1
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 6.9e-36 153.7 91 83.5
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 9.0e-36 153.3 88 88.6
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 2.0e-35 152.1 91 83.5
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 1.3e-34 149.4 91 81.3
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 2.9e-34 148.3 90 77.8
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 80.2
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 3.8e-34 147.9 89 80.9
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 80.2
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 82.4
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 4.9e-34 147.5 91 79.1
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 4.9e-34 147.5 91 81.3
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 6.4e-34 147.1 91 79.1
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 6.4e-34 147.1 89 80.9
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 8.4e-34 146.7 91 79.1
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.4e-34 146.7 91 80.2
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.4e-33 146.0 91 79.1
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.4e-33 146.0 91 79.1
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 1.4e-33 146.0 91 79.1
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.9e-33 145.6 91 78.0
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 1.9e-33 145.6 89 80.9
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 2.4e-33 145.2 91 79.1
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 3.2e-33 144.8 91 79.1
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 4.2e-33 144.4 91 79.1
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 5.5e-33 144.1 91 79.1
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 5.5e-33 144.1 90 77.8
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 5.5e-33 144.1 90 77.8
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 5.5e-33 144.1 91 79.1
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 9.3e-33 143.3 91 79.1
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.2e-32 142.9 91 78.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 1.6e-32 142.5 91 76.9
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 1.6e-32 142.5 91 79.1
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 2.1e-32 142.1 91 73.6
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.7e-32 141.7 91 78.0
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 3.5e-32 141.4 85 80.0
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 4.6e-32 141.0 86 80.2
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 6.0e-32 140.6 85 78.8
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 6.0e-32 140.6 88 77.3
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 6.0e-32 140.6 91 76.9
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 7.9e-32 140.2 90 74.4
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 1.0e-31 139.8 86 75.6
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 1.0e-31 139.8 88 75.0
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 1.3e-31 139.4 89 76.4
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.3e-31 139.4 91 76.9
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.3e-31 139.4 90 74.4
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.3e-31 139.4 90 74.4
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 3.0e-31 138.3 91 73.6
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.9e-31 137.9 91 75.8
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 5.1e-31 137.5 89 76.4
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 5.1e-31 137.5 86 76.7
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 6.7e-31 137.1 91 74.7
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.5e-30 135.2 89 74.2
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 3.3e-30 134.8 91 72.5
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 5.6e-30 134.0 89 73.0
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 9.6e-30 133.3 86 73.3
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 1.3e-29 132.9 86 72.1
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 2.1e-29 132.1 86 72.1
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 2.1e-29 132.1 86 72.1
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 2.4e-28 128.6 90 70.0
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 2.4e-28 128.6 90 70.0
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 6.9e-28 127.1 83 74.7
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 6.9e-28 127.1 82 75.6
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 9.0e-28 126.7 90 68.9
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.2e-27 126.3 89 68.5
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 1.5e-27 125.9 88 70.5
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.5e-27 125.9 82 74.4
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 3.4e-27 124.8 86 67.4
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 7.6e-27 123.6 83 72.3
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 7.6e-27 123.6 89 70.8
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 7.6e-27 123.6 86 72.1
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.7e-26 122.5 81 70.4
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.7e-26 122.5 86 65.1
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 2.9e-26 121.7 90 66.7
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 3.8e-26 121.3 87 69.0
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 6.5e-26 120.6 83 68.7
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.4e-26 120.2 83 71.1
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 1.1e-25 119.8 82 70.7
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.9e-25 119.0 85 69.4
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 3.2e-25 118.2 83 68.7
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 4.2e-25 117.9 89 66.3
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 2.1e-24 115.5 83 68.7
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 2.7e-24 115.2 74 74.3
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 4.6e-24 114.4 88 62.5
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 6.0e-24 114.0 71 76.1
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 6.0e-24 114.0 85 65.9
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 7.9e-24 113.6 83 67.5
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.3e-23 112.8 83 66.3
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 8.7e-23 110.2 89 64.0
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 2.2e-21 105.5 84 60.7
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 2.2e-21 105.5 84 60.7
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 6.3e-21 104.0 84 59.5
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 6.3e-21 104.0 65 75.4
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 4.1e-20 101.3 79 64.6
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 5.3e-20 100.9 87 58.6
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 5.3e-20 100.9 82 58.5
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 6.9e-20 100.5 82 58.5
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 9.0e-20 100.1 82 57.3
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.2e-19 99.8 91 58.2
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-19 99.4 82 57.3
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-19 99.4 82 57.3
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-19 99.4 82 57.3
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 1.5e-19 99.4 82 57.3
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 4.5e-19 97.8 86 57.0
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 5.9e-19 97.4 82 56.1
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.0e-18 96.7 82 56.1
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.0e-18 96.7 82 56.1
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 6.5e-18 94.0 60 76.7
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 1.3e-13 79.7 60 63.3
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.7e-13 79.3 51 72.5
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 3.7e-13 78.2 60 61.7
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 4.8e-13 77.8 68 55.9
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 1.4e-12 76.3 82 48.8
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.8e-12 75.9 60 65.0
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 4.1e-12 74.7 49 69.4
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 1.2e-11 73.2 82 47.6
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.2e-11 73.2 60 63.3
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.5e-11 72.8 70 55.7
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.5e-11 72.8 60 63.3
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 3.2e-09 65.1 49 63.3
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 3.2e-09 65.1 49 63.3


User provided reference genes

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