Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 0.0e+00 1224.9 684 100.0
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.6e-137 494.2 699 49.6
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 4.6e-108 396.4 697 43.5
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.8e-102 376.7 684 42.3
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 6.1e-44 183.3 779 28.1
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.7e-38 165.2 155 55.5
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 9.4e-37 159.5 154 52.6
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 2.7e-36 157.9 761 26.4
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 8.0e-36 156.4 189 48.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.4e-35 155.6 158 49.4
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 2.3e-35 154.8 214 45.8
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 5.2e-35 153.7 127 57.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.8e-35 153.3 130 57.7
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.2e-34 152.5 675 27.3
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.2e-34 152.5 133 56.4
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.5e-34 152.1 652 27.9
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.0e-34 151.8 692 28.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.4e-34 151.0 216 44.4
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 4.4e-34 150.6 672 27.8
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 7.5e-34 149.8 150 54.7
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.3e-33 149.1 166 48.2
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.2e-33 148.3 137 54.7
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 8.3e-33 146.4 668 27.1
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 8.3e-33 146.4 672 26.3
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.3e-33 146.4 186 45.2
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.8e-32 145.2 134 53.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.6e-31 142.1 676 25.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-31 141.7 137 52.6
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.0e-31 141.7 137 52.6
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.5e-31 141.0 164 47.6
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.5e-31 140.6 221 39.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 4.5e-31 140.6 182 42.3
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 7.7e-31 139.8 175 45.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.0e-30 139.4 726 26.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.3e-30 139.0 136 50.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.3e-30 139.0 214 40.2
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.7e-30 138.7 158 51.3
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 5.0e-30 137.1 153 48.4
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.1e-29 136.0 215 40.5
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.9e-29 135.2 207 42.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.9e-29 135.2 157 47.1
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.5e-29 134.8 179 45.3
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.2e-28 132.5 204 41.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.2e-28 132.5 662 26.1
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.6e-28 132.1 143 46.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.8e-28 131.3 364 30.5
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.8e-28 131.3 403 30.5
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.6e-28 131.0 207 39.1
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 3.6e-28 131.0 690 25.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.6e-28 131.0 712 25.6
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.7e-28 130.6 689 25.5
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.4e-27 129.0 118 51.7
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.4e-27 129.0 163 44.2
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.4e-27 129.0 670 29.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 4.0e-27 127.5 531 27.7
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 6.8e-27 126.7 138 47.1
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.2e-26 125.9 401 28.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.2e-26 125.9 221 36.2
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.5e-26 125.6 361 31.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.5e-26 123.2 209 34.4
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.7e-25 122.1 539 29.5
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.2e-25 121.7 229 36.2
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.8e-25 121.3 415 28.4
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.8e-25 121.3 672 24.7
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 4.9e-25 120.6 219 37.9
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.8e-24 118.6 415 28.2
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.8e-24 118.6 158 42.4
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.1e-24 117.9 154 44.8
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.2e-24 116.3 660 25.6
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.7e-23 114.8 672 25.9
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 5.9e-23 113.6 110 49.1
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 2.3e-22 111.7 802 24.2
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 6.6e-22 110.2 121 44.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 8.6e-22 109.8 190 35.3
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 8.6e-22 109.8 155 38.7
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 8.6e-22 109.8 221 33.9
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.9e-21 108.6 206 33.5
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 3.3e-21 107.8 155 38.1
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 4.3e-21 107.5 103 48.5
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 5.6e-21 107.1 155 38.1
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.2e-20 105.9 702 24.4
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.8e-20 104.8 731 25.7
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 3.6e-20 104.4 159 35.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 4.7e-20 104.0 185 38.4
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.0e-19 102.8 694 22.6
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 4.0e-19 100.9 151 40.4
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.5e-18 99.0 192 35.4
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 3.4e-18 97.8 201 30.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 7.5e-18 96.7 494 23.9
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 9.8e-18 96.3 171 38.6
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.7e-17 95.5 175 36.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.4e-16 92.4 318 25.2
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 7.0e-16 90.1 659 25.6
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 3.5e-15 87.8 433 24.7
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 5.9e-15 87.0 135 36.3
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 2.3e-14 85.1 171 32.2
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 3.9e-14 84.3 81 45.7
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.6e-14 83.2 146 36.3
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 7.3e-13 80.1 55 63.6
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.1e-12 78.6 137 36.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.1e-12 78.6 137 36.5
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.8e-12 78.2 55 61.8
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.5e-10 72.4 127 33.1
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 9.8e-10 69.7 160 33.1
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 3.7e-09 67.8 608 20.6
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.1e-08 66.2 59 50.8
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 6.0e-07 60.5 161 29.8
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 1.3e-06 59.3 82 40.2
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 3.0e-06 58.2 79 36.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 6.6e-06 57.0 673 21.2


User provided reference genes

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