Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3512 Erigeron canadensis HOM05D003606 ORTHO05D004650 1.4e-196 689.9 409 100.0
HanXRQChr17g0563081 Helianthus annuus HOM05D003606 ORTHO05D004650 2.1e-176 622.9 406 92.6
AUR62029807 Chenopodium quinoa HOM05D003606 ORTHO05D004650 8.3e-165 584.3 429 78.8
AUR62023088 Chenopodium quinoa HOM05D003606 ORTHO05D004650 4.1e-164 582.0 429 78.6
Ciclev10015115m.g Citrus clementina HOM05D003606 ORTHO05D004650 1.6e-163 580.1 409 78.7
Nitab4.5_0001284g0090 Nicotiana tabacum HOM05D003606 ORTHO05D004650 8.6e-162 574.3 409 81.7
HanXRQChr16g0524861 Helianthus annuus HOM05D003606 ORTHO05D004650 6.2e-160 568.2 409 86.1
Nn5g28763 Nelumbo nucifera HOM05D003606 ORTHO05D004650 1.4e-159 567.0 405 83.5
Solyc03g112530.3 Solanum lycopersicum HOM05D003606 ORTHO05D004650 8.9e-159 564.3 410 83.2
Sopen03g031590 Solanum pennellii HOM05D003606 ORTHO05D004650 8.9e-159 564.3 410 83.2
PGSC0003DMG400018107 Solanum tuberosum HOM05D003606 ORTHO05D004650 8.9e-159 564.3 410 83.2
PSO675G6796 Papaver somniferum HOM05D003606 ORTHO05D004650 7.5e-158 561.2 398 84.4
Sabra09G0042600 Salix brachista HOM05D003606 ORTHO05D004650 1.7e-157 560.1 396 85.4
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 2.9e-157 559.3 404 76.0
THA.LOC104819092 Tarenaya hassleriana HOM05D003606 ORTHO05D004650 3.2e-156 555.8 409 77.5
Cpa.g.sc19.249 Carica papaya HOM05D003606 ORTHO05D004650 1.2e-155 553.9 398 80.7
PSO541G2647 Papaver somniferum HOM05D003606 ORTHO05D004650 9.5e-153 544.3 404 81.7
Lsat_1_v5_gn_4_31941 Lactuca sativa HOM05D003606 ORTHO05D004650 8.1e-152 541.2 409 83.4
CAN.G338.7 Capsicum annuum HOM05D003606 ORTHO05D004650 1.1e-151 540.8 410 81.5
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 1.4e-151 540.4 409 79.5
Ca_19553_v3 Cicer arietinum L. HOM05D003606 ORTHO05D004650 2.6e-150 536.2 391 79.0
Potri.009G058000 Populus trichocarpa HOM05D003606 ORTHO05D004650 7.6e-150 534.6 396 83.1
GSVIVG01032166001 Vitis vinifera HOM05D003606 ORTHO05D004650 7.6e-150 534.6 409 81.7
RcHm_v2.0_Chr1g0317321 Rosa chinensis HOM05D003606 ORTHO05D004650 1.3e-149 533.9 391 79.5
Sc23g0005910 Simmondsia chinensis HOM05D003606 ORTHO05D004650 6.4e-149 531.6 403 80.9
MD02G1305600 Malus domestica HOM05D003606 ORTHO05D004650 2.4e-148 529.6 404 80.7
TWI32G0899 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 4.1e-148 528.9 409 80.4
FAN03G2659 Fragaria x ananassa HOM05D003606 ORTHO05D004650 5.4e-148 528.5 410 76.6
Atru.chr11.2590 Acer truncatum HOM05D003606 ORTHO05D004650 7.1e-148 528.1 409 82.2
Dinv09318 Davidia involucrata HOM05D003606 ORTHO05D004650 7.1e-148 528.1 409 81.2
FvH4_7g01500 Fragaria vesca HOM05D003606 ORTHO05D004650 9.2e-148 527.7 395 78.2
FAN01G0800 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.2e-147 527.3 410 76.3
FAN10G3084 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.2e-147 527.3 410 76.3
Eucgr.G03357 Eucalyptus grandis HOM05D003606 ORTHO05D004650 1.6e-147 526.9 409 81.2
Psat6g110240 Pisum sativum HOM05D003606 ORTHO05D004650 1.6e-147 526.9 410 75.4
CDE02G3858 Ceratophyllum demersum HOM05D003606 ORTHO05D004650 2.1e-147 526.6 396 81.1
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 2.1e-147 526.6 395 73.7
vmacro13693 Vaccinium macrocarpon HOM05D003606 ORTHO05D004650 3.5e-147 525.8 414 80.4
CiPaw.05G162700 Carya illinoinensis HOM05D003606 ORTHO05D004650 4.6e-147 525.4 402 81.1
Medtr1g054300 Medicago truncatula HOM05D003606 ORTHO05D004650 4.6e-147 525.4 391 77.7
TPR.G14490 Trifolium pratense HOM05D003606 ORTHO05D004650 1.0e-146 524.2 404 75.7
TWI34G0860 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 1.3e-146 523.9 396 81.8
Gohir.A08G142700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 1.7e-146 523.5 409 80.2
Gohir.D08G163700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 2.3e-146 523.1 409 80.2
Rhsim07G0058400 Rhododendron simsii HOM05D003606 ORTHO05D004650 2.3e-146 523.1 407 80.8
MELO3C023992.2 Cucumis melo HOM05D003606 ORTHO05D004650 3.0e-146 522.7 396 82.1
CsaV3_3G031990 Cucumis sativus L. HOM05D003606 ORTHO05D004650 3.0e-146 522.7 396 82.1
DCAR_003761 Daucus carota HOM05D003606 ORTHO05D004650 3.0e-146 522.7 398 82.4
MSTRG.2635 Avicennia marina HOM05D003606 ORTHO05D004650 5.1e-146 521.9 400 80.2
Gorai.004G170600 Gossypium raimondii HOM05D003606 ORTHO05D004650 5.1e-146 521.9 409 80.0
Dinv43413 Davidia involucrata HOM05D003606 ORTHO05D004650 8.6e-146 521.2 409 80.4
COL.COLO4_04879 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.1e-145 520.8 409 80.0
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 1.9e-145 520.0 409 79.7
Thecc.01G407200 Theobroma cacao HOM05D003606 ORTHO05D004650 9.6e-145 517.7 409 79.2
CiPaw.05G024300 Carya illinoinensis HOM05D003606 ORTHO05D004650 1.6e-144 516.9 409 80.0
Cc02_g29020 Coffea canephora HOM05D003606 ORTHO05D004650 2.1e-144 516.5 405 80.2
Haze_03155 Corylus avellana HOM05D003606 ORTHO05D004650 2.8e-144 516.2 406 80.0
Manes.10G139000 Manihot esculenta HOM05D003606 ORTHO05D004650 2.8e-144 516.2 409 79.2
Nitab4.5_0012005g0010 Nicotiana tabacum HOM05D003606 ORTHO05D004650 2.8e-144 516.2 409 75.6
Duzib138G0203 Durio zibethinus HOM05D003606 ORTHO05D004650 4.7e-144 515.4 397 80.4
Migut.D00412 Erythranthe guttata HOM05D003606 ORTHO05D004650 4.7e-144 515.4 416 78.1
ATR0626G036 Amborella trichopoda HOM05D003606 ORTHO05D004650 8.1e-144 514.6 393 72.3
Cfa010803 Carpinus fangiana HOM05D003606 ORTHO05D004650 8.1e-144 514.6 405 79.3
Ah.10g038660 Amaranthus hybridus HOM05D003606 ORTHO05D004650 3.1e-143 512.7 413 68.3
Prupe.2G020500 Prunus persica HOM05D003606 ORTHO05D004650 6.8e-143 511.5 402 79.1
Sed0024972 Sechium edule HOM05D003606 ORTHO05D004650 1.2e-142 510.8 396 80.6
SGA_v2.0_scaffold1G00601 Striga asiatica HOM05D003606 ORTHO05D004650 7.6e-142 508.1 388 80.9
Lj5g0022697 Lotus japonicus HOM05D003606 ORTHO05D004650 1.1e-140 504.2 412 77.2
VMungo0464G1676 Vigna mungo HOM05D003606 ORTHO05D004650 7.1e-140 501.5 411 76.4
CARHR265750 Cardamine hirsuta HOM05D003606 ORTHO05D004650 3.5e-139 499.2 392 77.3
Phvul.004G092500 Phaseolus vulgaris HOM05D003606 ORTHO05D004650 7.8e-139 498.0 411 76.4
SGA_v2.0_scaffold138G35254 Striga asiatica HOM05D003606 ORTHO05D004650 5.1e-138 495.4 415 74.5
PGR031G1688 Punica granatum HOM05D003606 ORTHO05D004650 6.6e-138 495.0 404 75.5
Glyma.16G165100 Glycine max HOM05D003606 ORTHO05D004650 1.1e-137 494.2 408 75.7
Lalb_Chr21g0315701 Lupinus albus HOM05D003606 ORTHO05D004650 1.1e-137 494.2 396 77.8
Hund21610 Selenicereus undatus HOM05D003606 ORTHO05D004650 1.1e-137 494.2 429 70.9
MD17G1287700 Malus domestica HOM05D003606 ORTHO05D004650 3.1e-135 486.1 409 77.0
SEGI_00890 Sequoiadendron giganteum HOM05D003606 ORTHO05D004650 6.9e-135 485.0 396 72.5
Aqoxy2G00153 Aquilegia oxysepala HOM05D003606 ORTHO05D004650 9.0e-135 484.6 400 77.0
TAR633G2243 Trochodendron aralioides HOM05D003606 ORTHO05D004650 1.5e-134 483.8 524 63.2
Peaxi162Scf00089g01530 Petunia axillaris HOM05D003606 ORTHO05D004650 4.4e-134 482.3 409 76.0
Glyma.02G080600 Glycine max HOM05D003606 ORTHO05D004650 1.4e-132 477.2 403 75.4
SHI00285 Sapria himalayana HOM05D003606 ORTHO05D004650 2.4e-132 476.5 433 66.5
ClCG10G012220 Citrullus lanatus HOM05D003606 ORTHO05D004650 3.2e-132 476.1 411 73.2
Os11g0594200 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 1.3e-130 470.7 394 74.1
Thhalv10013442m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 6.6e-130 468.4 393 73.5
AT5G52820 Arabidopsis thaliana HOM05D003606 ORTHO05D004650 1.5e-129 467.2 397 73.0
Sp6g14980 Schrenkiella parvula HOM05D003606 ORTHO05D004650 1.5e-129 467.2 390 74.6
BcaB05g21983 Brassica carinata HOM05D003606 ORTHO05D004650 2.5e-129 466.5 405 71.9
Aa31LG3G9060 Aethionema arabicum HOM05D003606 ORTHO05D004650 9.6e-129 464.5 408 71.8
BcaC03g14497 Brassica carinata HOM05D003606 ORTHO05D004650 1.6e-128 463.8 405 71.4
C02p19350 Brassica napus HOM05D003606 ORTHO05D004650 1.6e-128 463.8 405 71.4
BolC2t08070H Brassica oleracea HOM05D003606 ORTHO05D004650 1.6e-128 463.8 405 71.4
BcaB08g35635 Brassica carinata HOM05D003606 ORTHO05D004650 8.1e-128 461.5 406 63.1
Oeu025828.1 Olea europaea HOM05D003606 ORTHO05D004650 1.4e-127 460.7 534 58.6
AL8G27260 Arabidopsis lyrata HOM05D003606 ORTHO05D004650 9.0e-127 458.0 394 72.3
Os10g0104500 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 9.0e-127 458.0 397 72.5
Zm00001eb297740 Zea mays HOM05D003606 ORTHO05D004650 2.6e-126 456.4 388 72.9
A02p11600 Brassica napus HOM05D003606 ORTHO05D004650 3.4e-126 456.1 405 70.6
BraA02t06222Z Brassica rapa HOM05D003606 ORTHO05D004650 3.4e-126 456.1 405 70.6
QL06p005538 Quercus lobata HOM05D003606 ORTHO05D004650 2.2e-125 453.4 366 79.5
Carub.0008s1298 Capsella rubella HOM05D003606 ORTHO05D004650 2.9e-125 453.0 393 72.0
Manes.07G008500 Manihot esculenta HOM05D003606 ORTHO05D004650 2.4e-124 449.9 409 72.9
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis HOM05D003606 ORTHO05D004650 7.1e-124 448.4 398 70.1
Thhalv10025051m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 2.1e-123 446.8 409 63.8
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea HOM05D003606 ORTHO05D004650 3.5e-123 446.0 410 71.7
BcaNung04849 Brassica carinata HOM05D003606 ORTHO05D004650 1.0e-122 444.5 403 64.8
BolC9t59770H Brassica oleracea HOM05D003606 ORTHO05D004650 1.0e-122 444.5 403 64.8
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.0e-122 443.0 426 64.3
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea HOM05D003606 ORTHO05D004650 8.7e-122 441.4 410 71.5
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea HOM05D003606 ORTHO05D004650 1.5e-121 440.7 410 71.2
Pp3c1_35350 Physcomitrium patens HOM05D003606 ORTHO05D004650 1.5e-121 440.7 391 72.4
C09p70260 Brassica napus HOM05D003606 ORTHO05D004650 2.5e-121 439.9 403 64.5
Mapoly0082s0085 Marchantia polymorpha HOM05D003606 ORTHO05D004650 7.4e-121 438.3 391 71.4
BcaNung04664 Brassica carinata HOM05D003606 ORTHO05D004650 3.1e-119 433.0 401 64.6
BolC7t45366H Brassica oleracea HOM05D003606 ORTHO05D004650 6.9e-119 431.8 394 64.5
BcaC06g33533 Brassica carinata HOM05D003606 ORTHO05D004650 1.3e-117 427.6 419 61.3
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea HOM05D003606 ORTHO05D004650 2.9e-117 426.4 410 59.8
AUR62009405 Chenopodium quinoa HOM05D003606 ORTHO05D004650 6.5e-117 425.2 408 70.3
HPP92_026819 Vanilla planifolia HOM05D003606 ORTHO05D004650 1.1e-116 424.5 452 52.9
CBR_g38286 Chara braunii HOM05D003606 ORTHO05D004650 1.9e-116 423.7 390 61.8
CANSAT01G2566 Cannabis sativa HOM05D003606 ORTHO05D004650 1.8e-114 417.2 389 68.4
PSO541G4704 Papaver somniferum HOM05D003606 ORTHO05D004650 1.8e-114 417.2 373 64.9
C07p48580 Brassica napus HOM05D003606 ORTHO05D004650 8.7e-114 414.8 428 59.3
SMO259G0032 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 6.9e-111 405.2 409 57.9
A10p29890 Brassica napus HOM05D003606 ORTHO05D004650 2.1e-107 393.7 403 57.8
BcaC04g20537 Brassica carinata HOM05D003606 ORTHO05D004650 2.7e-107 393.3 418 55.3
SGA_v2.0_scaffold90G27689 Striga asiatica HOM05D003606 ORTHO05D004650 3.0e-106 389.8 391 69.3
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 3.2e-100 369.8 368 62.2
MCO05G213 Micromonas commoda HOM05D003606 ORTHO05D004650 1.6e-99 367.5 390 54.6
TPR.G7603 Trifolium pratense HOM05D003606 ORTHO05D004650 9.7e-97 358.2 335 65.4
BcaC06g32566 Brassica carinata HOM05D003606 ORTHO05D004650 2.6e-94 350.1 386 52.6
BcaNung05838 Brassica carinata HOM05D003606 ORTHO05D004650 3.0e-90 336.7 387 49.6
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 2.0e-86 323.9 197 78.2
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 4.5e-86 322.8 422 51.4
MD09G1280600 Malus domestica HOM05D003606 ORTHO05D004650 5.9e-86 322.4 320 68.8
HanXRQChr15g0491881 Helianthus annuus HOM05D003606 ORTHO05D004650 1.5e-81 307.8 194 78.4
Haze_26363 Corylus avellana HOM05D003606 ORTHO05D004650 3.8e-77 293.1 398 46.5
Cre01.g000600 Chlamydomonas reinhardtii HOM05D003606 ORTHO05D004650 7.2e-76 288.9 388 52.8
BraA10t45027Z Brassica rapa HOM05D003606 ORTHO05D004650 3.5e-70 270.0 256 64.8
COL.COLO4_04880 Corchorus olitorius HOM05D003606 ORTHO05D004650 2.5e-68 263.8 293 66.9
CSS0037178 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 4.9e-64 249.6 124 92.7
BraA10t43107Z Brassica rapa HOM05D003606 ORTHO05D004650 3.3e-60 236.9 262 58.0
AUR62034729 Chenopodium quinoa HOM05D003606 ORTHO05D004650 3.3e-60 236.9 124 87.1
A10p10270 Brassica napus HOM05D003606 ORTHO05D004650 4.7e-59 233.0 262 57.6
BolC9t57121H Brassica oleracea HOM05D003606 ORTHO05D004650 7.8e-54 215.7 179 60.9
Sc03g0002540 Simmondsia chinensis HOM05D003606 ORTHO05D004650 4.9e-48 196.4 123 76.4
C09p42410 Brassica napus HOM05D003606 ORTHO05D004650 8.3e-48 195.7 167 59.3
BcaC06g33525 Brassica carinata HOM05D003606 ORTHO05D004650 1.1e-47 195.3 125 73.6
Cfa026891 Carpinus fangiana HOM05D003606 ORTHO05D004650 2.7e-46 190.7 357 39.5
CSS0009389 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 2.3e-45 187.6 88 96.6
Manes.07G009860 Manihot esculenta HOM05D003606 ORTHO05D004650 9.5e-44 182.2 88 92.0
Medtr0421s0030 Medicago truncatula HOM05D003606 ORTHO05D004650 5.4e-39 166.4 105 75.2
BcaNung04851 Brassica carinata HOM05D003606 ORTHO05D004650 1.2e-33 148.7 104 72.1
BraA10t45028Z Brassica rapa HOM05D003606 ORTHO05D004650 2.9e-32 144.1 95 74.7
TAR636G3369 Trochodendron aralioides HOM05D003606 ORTHO05D003127 2.3e-29 134.4 141 53.9
Oeu060950.1 Olea europaea HOM05D003606 ORTHO05D016710 9.6e-28 129.0 185 44.9
MD09G1280700 Malus domestica HOM05D003606 ORTHO05D004650 1.2e-27 128.6 81 76.5
COL.COLO4_24393 Corchorus olitorius HOM05D003606 ORTHO05D004650 8.9e-26 122.5 124 53.2
CANSAT51G0014 Cannabis sativa HOM05D003606 ORTHO05D004650 5.8e-25 119.8 80 72.5
SalBow4G2833 Salvia bowleyana HOM05D003606 ORTHO05D004650 1.4e-23 115.2 72 77.8
BolC9t57120H Brassica oleracea HOM05D003606 ORTHO05D033191 1.5e-20 105.1 91 57.1
SMO259G0025 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 4.3e-20 103.6 50 84.0
CSS0038697 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D016710 9.6e-20 102.4 57 80.7
TPR.G39665 Trifolium pratense HOM05D003606 ORTHO05D033191 3.1e-18 97.4 67 68.7
GSVIVG01032170001 Vitis vinifera HOM05D003606 ORTHO05D004650 3.1e-18 97.4 63 69.8
Eucgr.G03354 Eucalyptus grandis HOM05D003606 ORTHO05D004650 6.9e-18 96.3 117 48.7
QL06p005531 Quercus lobata HOM05D011240 ORTHO05D014254 3.4e-17 94.0 44 93.2
TAR636G2756 Trochodendron aralioides HOM05D003606 ORTHO05D004650 2.2e-16 91.3 43 93.0
C09p42400 Brassica napus HOM05D003606 ORTHO05D033191 3.8e-16 90.5 80 53.8
BcaC01g02187 Brassica carinata HOM05D003606 ORTHO05D016710 3.2e-15 87.4 120 62.5
Eucgr.G03346 Eucalyptus grandis HOM05D003606 ORTHO05D004650 4.2e-15 87.0 45 84.4
Hund00229 Selenicereus undatus HOM05D003606 ORTHO05D004650 4.2e-15 87.0 43 86.0
CSS0009074 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 1.0e-13 82.4 41 92.7
CSS0037126 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 1.0e-13 82.4 41 92.7
C02p14020 Brassica napus HOM05D003606 ORTHO05D016710 2.5e-12 77.8 170 31.8
Oeu060951.1 Olea europaea HOM05D003606 ORTHO05D004650 4.3e-12 77.0 38 89.5
BolC2t07520H Brassica oleracea HOM05D003606 ORTHO05D016710 1.4e-10 72.0 52 59.6
CSS0046585 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 5.3e-10 70.1 52 67.3
TPR.G8471 Trifolium pratense HOM05D003606 ORTHO05D004650 2.0e-09 68.2 40 72.5
Cre17.g723450 Chlamydomonas reinhardtii HOM05D010245 ORTHO05D017828 9.3e-07 59.3 321 24.6
THA.LOC104821238 Tarenaya hassleriana HOM05D002634 ORTHO05D003100 3.5e-06 57.4 80 38.8
EL10Ac4g07922 Beta vulgaris HOM05D005323 ORTHO05D006820 7.9e-06 56.2 305 33.4
A07p16570 Brassica napus HOM05D002634 ORTHO05D003100 7.9e-06 56.2 77 36.4


User provided reference genes

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