Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 7.9e-95 350.5 188 100.0
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 7.6e-21 104.8 211 41.7
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 1.5e-16 90.5 179 36.9
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 4.3e-16 89.0 210 41.9
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 5.6e-16 88.6 215 31.6
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.6e-16 87.8 225 39.6
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 9.6e-16 87.8 226 38.1
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 2.1e-15 86.7 226 38.9
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 3.6e-15 85.9 193 42.0
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.1e-14 84.3 219 38.8
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.1e-14 84.3 219 38.8
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.1e-14 84.3 195 42.1
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.8e-14 83.6 218 39.0
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 3.1e-14 82.8 207 39.6
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 6.9e-14 81.6 210 36.2
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 9.0e-14 81.3 207 39.6
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 9.0e-14 81.3 174 43.7
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 1.2e-13 80.9 210 36.7
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.5e-13 80.5 223 37.7
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 2.6e-13 79.7 218 38.1
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 3.4e-13 79.3 196 40.8
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 5.8e-13 78.6 223 36.8
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 7.6e-13 78.2 213 35.7
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 1.3e-12 77.4 208 40.4
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.9e-12 75.5 206 37.4
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 4.9e-12 75.5 216 31.9
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.1e-11 74.3 226 35.4
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.9e-11 73.6 226 35.0
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.9e-11 73.6 226 35.0
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 4.2e-11 72.4 200 41.5
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 7.1e-11 71.6 227 32.6
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 7.1e-11 71.6 216 40.3
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 1.2e-10 70.9 223 36.8
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 1.6e-10 70.5 209 37.3
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 2.1e-10 70.1 232 35.8
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.7e-10 69.7 226 35.0
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 4.6e-10 68.9 225 36.4
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 6.0e-10 68.6 218 35.8
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 1.3e-09 67.4 210 30.5
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 3.0e-09 66.2 78 48.7
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 5.1e-09 65.5 215 34.9
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 6.7e-09 65.1 194 33.0
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.1e-08 64.3 213 36.2
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.1e-08 64.3 172 34.3
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.1e-08 64.3 167 37.1
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 1.5e-08 63.9 228 34.2
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 2.5e-08 63.2 207 35.7
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 2.5e-08 63.2 183 34.4
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 5.6e-08 62.0 207 34.3
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.6e-07 60.5 240 30.0
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 1.6e-07 60.5 212 34.4
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 2.1e-07 60.1 232 34.9
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 8.1e-07 58.2 228 32.9
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.1e-06 57.8 218 31.7
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 4.0e-06 55.8 214 33.6
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 6.9e-06 55.1 219 32.4


User provided reference genes

Program Settings