Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3013 Erigeron canadensis HOM05D006200 ORTHO05D007569 1.8e-50 202.2 98 100.0
HanXRQChr10g0306841 Helianthus annuus HOM05D006200 ORTHO05D007569 1.5e-49 199.1 98 96.9
Lsat_1_v5_gn_5_121761 Lactuca sativa HOM05D006200 ORTHO05D007569 2.1e-46 188.7 98 88.8
Hma1.2p1_2053F.1_g312740 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 9.7e-44 179.9 98 85.7
arahy.Tifrunner.gnm1.ann1.GBED9Y Arachis hypogaea HOM05D006200 ORTHO05D007569 1.4e-42 176.0 98 82.7
CiPaw.04G196600 Carya illinoinensis HOM05D006200 ORTHO05D007569 1.8e-42 175.6 98 85.7
Lj8A134G80 Lonicera japonica HOM05D006200 ORTHO05D007569 3.1e-42 174.9 98 82.7
SGA_v2.0_scaffold181G39681 Striga asiatica HOM05D006200 ORTHO05D007569 5.3e-42 174.1 98 80.6
MD09G1123700 Malus domestica HOM05D006200 ORTHO05D007569 6.9e-42 173.7 98 82.7
CSS0018696 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 1.2e-41 172.9 98 81.6
CSS0021565 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 1.2e-41 172.9 98 81.6
Actinidia09782 Actinidia chinensis HOM05D006200 ORTHO05D007569 1.5e-41 172.6 96 83.3
Migut.M00041 Erythranthe guttata HOM05D006200 ORTHO05D007569 2.0e-41 172.2 98 79.6
Lalb_Chr04g0250001 Lupinus albus HOM05D006200 ORTHO05D007569 2.0e-41 172.2 98 80.6
MSTRG.14921 Avicennia marina HOM05D006200 ORTHO05D007569 2.6e-41 171.8 98 80.6
Ciclev10017136m.g Citrus clementina HOM05D006200 ORTHO05D007569 2.6e-41 171.8 98 81.6
Prupe.3G200400 Prunus persica HOM05D006200 ORTHO05D007569 2.6e-41 171.8 98 81.6
Haze_12649 Corylus avellana HOM05D006200 ORTHO05D007569 3.4e-41 171.4 98 82.7
Dinv05360 Davidia involucrata HOM05D006200 ORTHO05D007569 3.4e-41 171.4 98 81.6
LjContig00029g0002447 Lotus japonicus HOM05D006200 ORTHO05D007569 3.4e-41 171.4 98 80.6
Cfa014235 Carpinus fangiana HOM05D000160 ORTHO05D000496 4.5e-41 171.0 98 81.6
Medtr5g085420 Medicago truncatula HOM05D006200 ORTHO05D007569 4.5e-41 171.0 98 79.6
QL08p028355 Quercus lobata HOM05D006200 ORTHO05D007569 4.5e-41 171.0 97 81.4
Psat2g026360 Pisum sativum HOM05D006200 ORTHO05D007569 5.9e-41 170.6 98 79.6
Rhsim04G0037800 Rhododendron simsii HOM05D006200 ORTHO05D007569 5.9e-41 170.6 98 80.6
Hma1.2p1_0545F.1_g176060 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 7.7e-41 170.2 98 80.6
Manes.13G063700 Manihot esculenta HOM05D006200 ORTHO05D007569 1.0e-40 169.9 98 80.6
CAN.G1036.6 Capsicum annuum HOM05D006200 ORTHO05D007569 1.7e-40 169.1 98 80.6
MD17G1114500 Malus domestica HOM05D006200 ORTHO05D007569 2.2e-40 168.7 98 80.6
Sopen07g024150 Solanum pennellii HOM05D006200 ORTHO05D007569 2.2e-40 168.7 98 80.6
RcHm_v2.0_Chr2g0156461 Rosa chinensis HOM05D006200 ORTHO05D007569 2.9e-40 168.3 98 80.6
Glyma.14G048700 Glycine max HOM05D006200 ORTHO05D007569 3.8e-40 167.9 98 78.6
Nitab4.5_0001774g0080 Nicotiana tabacum HOM05D006200 ORTHO05D007569 3.8e-40 167.9 98 81.6
SalBow7G0450 Salvia bowleyana HOM05D006200 ORTHO05D007569 3.8e-40 167.9 98 76.5
Solyc07g047700.4 Solanum lycopersicum HOM05D006200 ORTHO05D007569 3.8e-40 167.9 98 79.6
FvH4_6g40890 Fragaria vesca HOM05D006200 ORTHO05D007569 5.0e-40 167.5 98 80.6
Nn1g07469 Nelumbo nucifera HOM05D006200 ORTHO05D007569 5.0e-40 167.5 98 79.6
PSO675G7132 Papaver somniferum HOM05D006200 ORTHO05D007569 5.0e-40 167.5 98 77.6
ClCG02G002790 Citrullus lanatus HOM05D006200 ORTHO05D007569 6.5e-40 167.2 98 78.6
Peaxi162Scf00776g00024 Petunia axillaris HOM05D006200 ORTHO05D007569 8.5e-40 166.8 98 80.6
Atru.chr6.3355 Acer truncatum HOM05D006200 ORTHO05D007569 1.4e-39 166.0 98 78.6
Cc05_g02100 Coffea canephora HOM05D006200 ORTHO05D007569 1.4e-39 166.0 98 79.6
FAN02G1931 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.4e-39 166.0 98 79.6
Glyma.02G268700 Glycine max HOM05D006200 ORTHO05D007569 1.4e-39 166.0 98 77.6
PSO541G4622 Papaver somniferum HOM05D006200 ORTHO05D007569 1.4e-39 166.0 98 76.5
PGSC0003DMG400006126 Solanum tuberosum HOM05D006200 ORTHO05D007569 1.4e-39 166.0 98 78.6
Rhsim02G0017500 Rhododendron simsii HOM05D006200 ORTHO05D007569 1.9e-39 165.6 98 77.6
CDE07G1212 Ceratophyllum demersum HOM05D006200 ORTHO05D007569 2.5e-39 165.2 98 76.5
Potri.014G164500 Populus trichocarpa HOM05D006200 ORTHO05D007569 2.5e-39 165.2 98 78.6
Os03g0751000 Oryza sativa ssp. japonica HOM05D006200 ORTHO05D007569 3.2e-39 164.9 98 76.5
TAR626G0047 Trochodendron aralioides HOM05D006200 ORTHO05D007569 3.2e-39 164.9 98 76.5
Carub.0003s2650 Capsella rubella HOM05D006200 ORTHO05D007569 5.5e-39 164.1 98 78.6
Oeu040457.1 Olea europaea HOM05D006200 ORTHO05D007569 5.5e-39 164.1 98 76.5
THA.LOC104815354 Tarenaya hassleriana HOM05D006200 ORTHO05D007569 7.2e-39 163.7 98 80.6
TPR.G25628 Trifolium pratense HOM05D006200 ORTHO05D007569 7.2e-39 163.7 98 76.5
TWI36G1668 Tripterygium wilfordii HOM05D006200 ORTHO05D007569 7.2e-39 163.7 98 77.6
Cc02_g04700 Coffea canephora HOM05D006200 ORTHO05D007569 1.2e-38 162.9 98 78.6
Sed0007295 Sechium edule HOM05D006200 ORTHO05D007569 1.2e-38 162.9 98 76.5
MELO3C024201.2 Cucumis melo HOM05D006200 ORTHO05D007569 2.1e-38 162.2 103 75.7
Aqoxy4G02230 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 74.5
AL3G42530 Arabidopsis lyrata HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
AT2G04900 Arabidopsis thaliana HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
BcaB06g26789 Brassica carinata HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
C07p10040 Brassica napus HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
BraA07t28456Z Brassica rapa HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
CARHR102920 Cardamine hirsuta HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
Thhalv10002727m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
Sp3g23500 Schrenkiella parvula HOM05D006200 ORTHO05D007569 6.1e-38 160.6 98 77.6
BcaC06g35887 Brassica carinata HOM05D006200 ORTHO05D007569 1.0e-37 159.8 98 77.6
BolC7t41451H Brassica oleracea HOM05D006200 ORTHO05D007569 1.0e-37 159.8 98 77.6
Sed0012997 Sechium edule HOM05D006200 ORTHO05D007569 1.0e-37 159.8 98 75.5
HPP92_012226 Vanilla planifolia HOM05D006200 ORTHO05D007569 1.0e-37 159.8 98 74.5
Zm00001eb181090 Zea mays HOM05D006200 ORTHO05D007569 1.8e-37 159.1 98 74.5
A07p06630 Brassica napus HOM05D006200 ORTHO05D007569 2.3e-37 158.7 98 76.5
CANSAT64G0383 Cannabis sativa HOM05D006200 ORTHO05D007569 3.9e-37 157.9 98 72.4
Zm00001eb057520 Zea mays HOM05D006200 ORTHO05D007569 3.9e-37 157.9 98 73.5
ATR0624G019 Amborella trichopoda HOM05D006200 ORTHO05D007569 5.1e-37 157.5 98 73.5
FAN09G2038 Fragaria x ananassa HOM05D006200 ORTHO05D007569 5.1e-37 157.5 113 69.9
Manes.12G061800 Manihot esculenta HOM05D006200 ORTHO05D007569 5.1e-37 157.5 97 76.3
Eucgr.A01040 Eucalyptus grandis HOM05D006200 ORTHO05D007569 6.7e-37 157.1 98 73.5
Cpa.g.sc136.18 Carica papaya HOM05D006200 ORTHO05D007569 8.8e-37 156.8 98 75.5
AUR62029092 Chenopodium quinoa HOM05D006200 ORTHO05D007569 1.5e-36 156.0 96 70.8
FAN05G3226 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.5e-36 156.0 113 69.0
FAN14G5749 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.5e-36 156.0 113 69.0
MBI16_g28733_MAGBIO Magnolia biondii HOM05D006200 ORTHO05D007569 2.0e-36 155.6 98 75.5
Thecc.01G190500 Theobroma cacao HOM05D006200 ORTHO05D007569 2.0e-36 155.6 98 72.4
vmacro09406 Vaccinium macrocarpon HOM05D006200 ORTHO05D007569 2.8e-35 151.8 131 59.5
GSVIVG01030523001 Vitis vinifera HOM05D006200 ORTHO05D007569 6.3e-35 150.6 95 71.6
GSVIVG01030518001 Vitis vinifera HOM05D006200 ORTHO05D007569 1.8e-34 149.1 95 70.5
Aa31sc107G30 Aethionema arabicum HOM05D006200 ORTHO05D007569 2.4e-34 148.7 127 60.6
Gohir.A07G167000 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.6e-33 145.2 98 67.3
Gohir.D07G172300 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.6e-33 145.2 98 67.3
Gorai.001G192600 Gossypium raimondii HOM05D006200 ORTHO05D007569 2.6e-33 145.2 98 67.3
SEGI_07661 Sequoiadendron giganteum HOM05D006200 ORTHO05D007569 2.6e-33 145.2 98 69.4
Sabra14G0125300 Salix brachista HOM05D006200 ORTHO05D007569 1.7e-32 142.5 125 58.4
Pp3c6_18900 Physcomitrium patens HOM05D006200 ORTHO05D007569 2.2e-32 142.1 98 65.3
Zm00001eb025380 Zea mays HOM05D006200 ORTHO05D007569 2.9e-32 141.7 117 59.8
Duzib138G0810 Durio zibethinus HOM05D006200 ORTHO05D007569 4.2e-31 137.9 98 62.2
Mapoly0007s0279 Marchantia polymorpha HOM05D006200 ORTHO05D007569 3.6e-30 134.8 98 61.2
SMO356G0472 Selaginella moellendorffii HOM05D006200 ORTHO05D007569 9.7e-28 126.7 78 73.1
MSTRG.6639 Avicennia marina HOM05D006200 ORTHO05D007569 2.8e-27 125.2 75 76.0
CsaV3_7G002590 Cucumis sativus L. HOM05D006200 ORTHO05D007569 3.7e-27 124.8 85 69.4
COL.COLO4_33018 Corchorus olitorius HOM05D006200 ORTHO05D007569 6.3e-27 124.0 141 45.4
Pp3c6_18880 Physcomitrium patens HOM05D006200 ORTHO05D007569 1.1e-26 123.2 96 56.2
arahy.Tifrunner.gnm1.ann1.HJ95Y2 Arachis hypogaea HOM05D006200 ORTHO05D007569 7.0e-26 120.6 65 84.6
DCAR_021101 Daucus carota HOM05D006200 ORTHO05D007569 1.0e-24 116.7 65 81.5
Zm00001eb402120 Zea mays HOM05D006200 ORTHO05D007569 1.1e-23 113.2 96 59.4
Phvul.008G213600 Phaseolus vulgaris HOM05D006200 ORTHO05D007569 1.9e-23 112.5 65 76.9
Zm00001eb414470 Zea mays HOM05D006200 ORTHO05D007569 7.2e-23 110.5 69 72.5
Cre12.g543050 Chlamydomonas reinhardtii HOM05D006200 ORTHO05D007569 2.7e-22 108.6 96 51.0
Ah.01g013830 Amaranthus hybridus HOM05D004982 ORTHO05D007569 6.7e-21 104.0 63 68.3
Thhalv10009367m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 4.5e-17 91.3 50 84.0
MD17G1249100 Malus domestica HOM05D006200 ORTHO05D007569 4.5e-17 91.3 50 80.0
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 4.5e-17 91.3 51 80.4
Thhalv10016039m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 7.7e-17 90.5 50 82.0
Thhalv10023849m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.3e-16 89.7 50 82.0
Zm00001eb093000 Zea mays HOM05D006200 ORTHO05D007569 1.3e-16 89.7 96 50.0
Thhalv10027363m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 2.2e-16 89.0 50 82.0
PGR042G1757 Punica granatum HOM05D006200 ORTHO05D007569 2.9e-16 88.6 50 78.0
AUR62015021 Chenopodium quinoa HOM05D006200 ORTHO05D007569 5.5e-15 84.3 48 72.9
Pp3c16_4930 Physcomitrium patens HOM05D006200 ORTHO05D007569 7.2e-15 84.0 67 58.2
Pp3c16_5110 Physcomitrium patens HOM05D006200 ORTHO05D007569 7.2e-15 84.0 67 58.2
AagrBONN_evm.TU.Sc2ySwM_368.977 Anthoceros agrestis HOM05D006200 ORTHO05D007569 6.1e-14 80.9 50 62.0
Zm00001eb125940 Zea mays HOM05D000001 ORTHO05D007569 5.7e-12 74.3 56 64.3
Aqoxy5G00520 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 3.7e-11 71.6 38 81.6
Hund21568 Selenicereus undatus HOM05D006200 ORTHO05D007569 5.0e-08 61.2 89 41.6


User provided reference genes

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