Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 7.1e-187 657.1 339 100.0
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 3.9e-68 262.7 357 51.5
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 2.1e-45 187.2 431 37.4
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 3.3e-43 179.9 418 37.8
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 5.7e-43 179.1 415 37.1
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 7.4e-43 178.7 289 47.4
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 1.3e-42 177.9 453 35.5
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 4.1e-41 172.9 434 35.3
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 9.1e-41 171.8 430 35.3
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 5.9e-40 169.1 437 32.7
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.7e-39 167.5 421 34.2
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.2e-39 167.2 383 35.8
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 6.5e-39 165.6 432 35.9
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 8.5e-39 165.2 437 34.3
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.5e-38 164.5 383 35.0
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 2.5e-38 163.7 434 33.9
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 4.2e-38 162.9 385 35.3
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 2.1e-37 160.6 377 35.5
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 2.7e-37 160.2 432 33.3
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 3.6e-37 159.8 448 34.2
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 5.2e-36 156.0 385 34.5
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.8e-36 155.2 385 34.5
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 1.5e-35 154.5 432 33.8
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 3.3e-35 153.3 422 35.8
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 9.7e-35 151.8 435 34.0
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 1.3e-34 151.4 440 32.7
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 2.2e-34 150.6 401 34.4
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.8e-33 147.5 441 34.0
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 5.3e-33 146.0 400 32.8
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.6e-32 144.4 386 33.4
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 2.7e-32 143.7 436 33.3
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 3.5e-32 143.3 434 32.5
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 5.0e-31 139.4 366 32.8
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 6.5e-31 139.0 434 32.7
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 1.5e-30 137.9 440 31.1
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 1.9e-30 137.5 433 32.1
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.9e-30 137.5 358 32.4
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 2.5e-30 137.1 541 28.7
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 5.5e-30 136.0 379 34.8
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 9.4e-30 135.2 389 32.1
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 9.4e-30 135.2 441 31.5
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 2.1e-29 134.0 414 32.4
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 2.1e-29 134.0 422 30.3
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 4.7e-29 132.9 420 30.5
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 8.0e-29 132.1 436 33.3
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.0e-28 131.7 375 32.8
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.0e-28 131.7 399 34.1
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 6.8e-28 129.0 417 31.4
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 1.2e-27 128.3 433 31.9
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 1.2e-27 128.3 435 31.0
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 9.8e-27 125.2 430 31.6
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 9.8e-27 125.2 384 33.1
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 1.7e-26 124.4 423 29.8
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 1.7e-26 124.4 399 32.1
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.7e-26 124.4 424 30.2
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 2.2e-26 124.0 422 29.9
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 4.8e-26 122.9 440 30.5
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 4.8e-26 122.9 446 29.1
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 6.3e-26 122.5 443 30.7
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 6.3e-26 122.5 430 28.1
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 6.3e-26 122.5 399 31.1
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 1.4e-25 121.3 439 28.7
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 1.8e-25 120.9 416 31.5
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.8e-25 120.9 334 33.8
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 3.1e-25 120.2 419 31.0
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 3.1e-25 120.2 449 30.7
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 5.4e-25 119.4 392 33.2
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 7.0e-25 119.0 453 29.8
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 9.1e-25 118.6 401 33.4
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 1.2e-24 118.2 442 31.0
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.2e-24 118.2 417 32.4
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 1.6e-24 117.9 376 32.2
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.7e-24 117.1 397 29.5
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.7e-24 117.1 434 30.2
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 5.9e-24 115.9 450 29.8
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 7.7e-24 115.5 396 31.1
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 7.7e-24 115.5 438 28.1
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 7.7e-24 115.5 433 30.9
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.3e-23 114.8 383 31.9
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 1.3e-23 114.8 436 31.4
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 1.7e-23 114.4 448 29.0
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 2.3e-23 114.0 400 32.8
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 2.9e-23 113.6 429 29.1
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 2.9e-23 113.6 414 30.7
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 3.8e-23 113.2 431 30.9
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 5.0e-23 112.8 390 30.5
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 8.6e-23 112.1 412 28.6
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.5e-22 111.3 438 29.9
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.5e-22 111.3 419 30.3
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 1.9e-22 110.9 400 32.0
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 2.5e-22 110.5 422 28.2
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 2.5e-22 110.5 444 31.3
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 4.2e-22 109.8 331 32.3
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 4.2e-22 109.8 430 28.4
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 5.5e-22 109.4 349 31.5
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 1.2e-21 108.2 417 30.5
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 1.2e-21 108.2 404 30.2
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 1.6e-21 107.8 338 32.5
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.6e-21 106.7 393 28.5
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 3.6e-21 106.7 440 30.7
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 3.6e-21 106.7 456 27.2
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 4.7e-21 106.3 363 31.7
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 6.1e-21 105.9 426 27.9
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.0e-21 105.5 415 29.9
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.0e-20 105.1 414 30.0
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 1.8e-20 104.4 392 31.1
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 2.3e-20 104.0 419 30.5
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 3.0e-20 103.6 316 32.3
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 3.0e-20 103.6 396 27.5
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 3.0e-20 103.6 418 29.7
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 5.2e-20 102.8 317 32.5
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 6.8e-20 102.4 417 29.0
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 6.8e-20 102.4 407 30.2
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 8.9e-20 102.1 336 31.0
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 1.2e-19 101.7 493 27.8
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 1.5e-19 101.3 432 28.7
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 3.4e-19 100.1 436 31.2
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.4e-19 99.8 417 30.7
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 4.4e-19 99.8 442 30.3
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 9.8e-19 98.6 433 26.6
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.3e-18 98.2 443 30.7
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 1.3e-18 98.2 375 30.1
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.8e-18 97.1 441 29.9
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 3.7e-18 96.7 388 30.2
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 6.3e-18 95.9 404 29.0
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 6.3e-18 95.9 456 27.2
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 1.1e-17 95.1 397 27.0
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 1.1e-17 95.1 341 30.2
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 1.4e-17 94.7 400 28.0
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.8e-17 94.4 386 29.5
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 4.1e-17 93.2 396 27.0
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 4.1e-17 93.2 310 32.3
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 5.4e-17 92.8 275 33.8
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 1.2e-16 91.7 380 28.2
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 1.6e-16 91.3 399 27.1
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 2.0e-16 90.9 406 28.1
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 3.5e-16 90.1 381 29.9
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 4.5e-16 89.7 407 28.5
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 7.8e-16 89.0 329 30.1
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 1.0e-15 88.6 331 30.2
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 1.7e-15 87.8 390 27.4
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 3.9e-15 86.7 428 27.3
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 3.9e-15 86.7 399 27.1
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 5.0e-15 86.3 400 28.5
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 6.6e-15 85.9 456 27.0
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 8.6e-15 85.5 406 26.6
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.9e-14 84.3 392 28.1
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 3.3e-14 83.6 283 33.6
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 3.3e-14 83.6 405 26.7
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 3.3e-14 83.6 447 26.8
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 5.6e-14 82.8 422 26.3
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 7.3e-14 82.4 420 26.9
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 4.7e-13 79.7 417 26.4
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 6.1e-13 79.3 420 26.7
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 6.8e-12 75.9 332 29.5
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 6.8e-12 75.9 454 27.3
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 1.5e-11 74.7 139 38.1
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 2.6e-11 73.9 382 24.3
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 9.8e-11 72.0 375 26.9
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 1.3e-10 71.6 314 28.7
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 1.7e-10 71.2 405 27.9
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 2.2e-10 70.9 156 35.9
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.1e-09 68.6 187 33.7
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 9.2e-09 65.5 203 32.5
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 6.0e-08 62.8 383 24.8
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 3.3e-06 57.0 120 35.0


User provided reference genes

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