Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 6.6e-61 237.3 126 100.0
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 1.3e-11 73.6 123 40.7
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 1.4e-10 70.1 117 41.9
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.1e-10 68.9 128 38.3
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.1e-10 68.9 123 39.8
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 4.0e-10 68.6 117 41.9
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 5.3e-10 68.2 124 41.1
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 9.0e-10 67.4 128 40.6
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 9.0e-10 67.4 125 37.6
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 1.2e-09 67.0 118 40.7
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.2e-09 67.0 128 39.8
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.5e-09 66.6 128 37.5
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 1.5e-09 66.6 130 43.1
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 1.5e-09 66.6 136 39.7
Lsat_1_v5_gn_4_30161 Lactuca sativa HOM05D002974 ORTHO05D002992 2.6e-09 65.9 97 51.5
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 7.6e-09 64.3 120 46.7
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 9.9e-09 63.9 128 38.3
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 1.3e-08 63.5 80 50.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 2.2e-08 62.8 126 40.5
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 3.8e-08 62.0 132 39.4
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 4.9e-08 61.6 126 33.3
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 4.9e-08 61.6 58 60.3
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 4.9e-08 61.6 135 40.7
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 4.9e-08 61.6 117 40.2
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 6.4e-08 61.2 91 44.0
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 6.4e-08 61.2 132 35.6
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 6.4e-08 61.2 57 57.9
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 6.4e-08 61.2 57 57.9
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 8.4e-08 60.8 120 40.0
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 1.1e-07 60.5 69 49.3
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 1.1e-07 60.5 147 34.7
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.1e-07 60.5 47 70.2
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.1e-07 60.5 47 70.2
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.1e-07 60.5 39 74.4
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 1.4e-07 60.1 51 58.8
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 1.4e-07 60.1 59 61.0
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 1.9e-07 59.7 60 60.0
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 1.9e-07 59.7 122 32.8
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 2.4e-07 59.3 58 58.6
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 2.4e-07 59.3 51 66.7
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 3.2e-07 58.9 121 36.4
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 3.2e-07 58.9 85 47.1
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 3.2e-07 58.9 132 38.6
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 4.2e-07 58.5 43 72.1
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 4.2e-07 58.5 47 66.0
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.2e-07 58.5 60 58.3
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.2e-07 58.5 59 57.6
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 4.2e-07 58.5 144 35.4
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 4.2e-07 58.5 51 66.7
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 4.2e-07 58.5 59 61.0
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 4.2e-07 58.5 72 50.0
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 4.2e-07 58.5 95 44.2
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 5.5e-07 58.2 47 63.8
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 5.5e-07 58.2 57 61.4
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 5.5e-07 58.2 125 39.2
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 7.1e-07 57.8 129 37.2
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 7.1e-07 57.8 138 37.0
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 7.1e-07 57.8 55 56.4
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 7.1e-07 57.8 60 58.3
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.1e-07 57.8 60 58.3
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 7.1e-07 57.8 141 34.0
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 7.1e-07 57.8 57 61.4
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 7.1e-07 57.8 61 59.0
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 7.1e-07 57.8 122 35.2
Zm00001eb369260 Zea mays HOM05D002974 ORTHO05D002992 7.1e-07 57.8 38 73.7
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 9.3e-07 57.4 47 70.2
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 9.3e-07 57.4 59 55.9
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 9.3e-07 57.4 71 49.3
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 9.3e-07 57.4 49 59.2
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 9.3e-07 57.4 58 58.6
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 9.3e-07 57.4 46 63.0
ClCG10G016220 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.2e-06 57.0 82 45.1
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.2e-06 57.0 94 40.4
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 1.2e-06 57.0 114 40.4
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 1.2e-06 57.0 59 54.2
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.6e-06 56.6 58 58.6
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 1.6e-06 56.6 52 59.6
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.6e-06 56.6 100 47.0
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 1.6e-06 56.6 131 38.9
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 1.6e-06 56.6 95 43.2
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.6e-06 56.6 118 39.8
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.1e-06 56.2 122 38.5
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.1e-06 56.2 49 63.3
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 2.1e-06 56.2 47 61.7
Lj3g0024515 Lotus japonicus HOM05D002974 ORTHO05D002992 2.1e-06 56.2 77 44.2
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 2.1e-06 56.2 70 48.6
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.1e-06 56.2 114 40.4
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 2.7e-06 55.8 112 39.3
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.7e-06 55.8 122 38.5
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 2.7e-06 55.8 55 56.4
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 2.7e-06 55.8 56 50.0
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 2.7e-06 55.8 73 47.9
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 2.7e-06 55.8 110 40.9
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 2.7e-06 55.8 49 65.3
Sed0012008 Sechium edule HOM05D002974 ORTHO05D002992 2.7e-06 55.8 112 38.4
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 2.7e-06 55.8 36 72.2
HPP92_028460 Vanilla planifolia HOM05D002974 ORTHO05D002992 2.7e-06 55.8 50 62.0
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 3.5e-06 55.5 43 65.1
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 3.5e-06 55.5 76 51.3
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 3.5e-06 55.5 35 74.3
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 3.5e-06 55.5 47 61.7
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 4.6e-06 55.1 50 62.0
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 4.6e-06 55.1 69 47.8
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 4.6e-06 55.1 137 34.3
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 4.6e-06 55.1 59 50.8
Os01g0808900 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 4.6e-06 55.1 38 71.1
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 4.6e-06 55.1 46 63.0
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 4.6e-06 55.1 129 33.3
BcaC07g40124 Brassica carinata HOM05D002974 ORTHO05D002992 6.0e-06 54.7 60 51.7
AUR62026884 Chenopodium quinoa HOM05D012416 ORTHO05D002992 6.0e-06 54.7 33 75.8
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.0e-06 54.7 33 75.8
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.0e-06 54.7 33 75.8
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 6.0e-06 54.7 55 54.5
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 6.0e-06 54.7 109 40.4
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 6.0e-06 54.7 103 35.9
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 6.0e-06 54.7 49 63.3
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 6.0e-06 54.7 54 59.3
A09p49560 Brassica napus HOM05D002974 ORTHO05D002992 7.9e-06 54.3 60 51.7
C06p23750 Brassica napus HOM05D002974 ORTHO05D002992 7.9e-06 54.3 105 36.2
BraA09t40409Z Brassica rapa HOM05D002974 ORTHO05D002992 7.9e-06 54.3 60 51.7
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 7.9e-06 54.3 100 42.0
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 7.9e-06 54.3 57 54.4
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 7.9e-06 54.3 80 43.8


User provided reference genes

Program Settings