Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 9.0e-65 250.4 152 100.0
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 1.1e-25 120.6 160 49.4
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 7.8e-16 87.8 164 40.9
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 1.7e-15 86.7 186 40.3
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 2.3e-15 86.3 73 61.6
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 5.0e-15 85.1 69 68.1
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 5.0e-15 85.1 71 63.4
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 5.0e-15 85.1 180 40.0
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 5.0e-15 85.1 74 63.5
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 6.6e-15 84.7 68 69.1
HanXRQChr17g0552651 Helianthus annuus HOM05D005097 ORTHO05D006186 8.6e-15 84.3 110 51.8
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 1.1e-14 84.0 71 64.8
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.9e-14 83.2 68 67.6
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 2.5e-14 82.8 76 59.2
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 2.5e-14 82.8 73 60.3
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 3.3e-14 82.4 70 62.9
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 3.3e-14 82.4 161 40.4
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 4.3e-14 82.0 174 38.5
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 4.3e-14 82.0 73 61.6
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 5.6e-14 81.6 172 40.1
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 5.6e-14 81.6 172 37.8
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 5.6e-14 81.6 172 40.1
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 5.6e-14 81.6 167 45.5
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 5.6e-14 81.6 83 63.9
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 5.6e-14 81.6 83 63.9
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 5.6e-14 81.6 73 60.3
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 5.6e-14 81.6 73 60.3
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 7.3e-14 81.3 182 39.6
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 7.3e-14 81.3 77 58.4
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 9.5e-14 80.9 74 63.5
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 9.5e-14 80.9 165 39.4
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 9.5e-14 80.9 67 62.7
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 9.5e-14 80.9 67 62.7
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 9.5e-14 80.9 73 63.0
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 1.2e-13 80.5 172 39.5
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 1.2e-13 80.5 172 39.5
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.2e-13 80.5 71 66.2
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.2e-13 80.5 67 61.2
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 1.2e-13 80.5 74 59.5
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 1.6e-13 80.1 176 44.3
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 2.1e-13 79.7 102 50.0
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 2.1e-13 79.7 68 64.7
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 2.8e-13 79.3 75 57.3
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 2.8e-13 79.3 70 61.4
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.8e-13 79.3 67 64.2
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 3.6e-13 79.0 171 39.8
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.6e-13 79.0 81 61.7
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 3.6e-13 79.0 173 36.4
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 3.6e-13 79.0 75 57.3
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 4.7e-13 78.6 171 40.4
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 4.7e-13 78.6 170 41.8
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 4.7e-13 78.6 171 40.4
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 4.7e-13 78.6 162 40.1
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 6.1e-13 78.2 68 63.2
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 8.0e-13 77.8 76 56.6
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 8.0e-13 77.8 166 44.0
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 1.0e-12 77.4 77 57.1
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 1.0e-12 77.4 169 36.1
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.0e-12 77.4 68 60.3
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 1.0e-12 77.4 163 41.1
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.4e-12 77.0 171 38.0
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.8e-12 76.6 75 56.0
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 1.8e-12 76.6 80 53.8
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 1.8e-12 76.6 69 62.3
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 1.8e-12 76.6 70 57.1
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 2.3e-12 76.3 170 41.2
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 2.3e-12 76.3 73 57.5
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 3.0e-12 75.9 167 44.3
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 3.0e-12 75.9 167 44.3
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 3.0e-12 75.9 75 57.3
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 3.0e-12 75.9 167 38.3
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 4.0e-12 75.5 74 55.4
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 4.0e-12 75.5 69 55.1
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 4.0e-12 75.5 67 55.2
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 5.2e-12 75.1 75 58.7
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 5.2e-12 75.1 72 59.7
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 6.8e-12 74.7 68 54.4
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 6.8e-12 74.7 72 65.3
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 8.9e-12 74.3 73 56.2
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 8.9e-12 74.3 75 57.3
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 1.2e-11 73.9 68 58.8
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.5e-11 73.6 75 57.3
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 1.5e-11 73.6 73 53.4
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.5e-11 73.6 71 62.0
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 3.4e-11 72.4 160 36.9
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 3.4e-11 72.4 71 54.9
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 4.4e-11 72.0 70 58.6
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 4.4e-11 72.0 71 59.2
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 4.4e-11 72.0 69 59.4
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 4.4e-11 72.0 180 43.3
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 5.7e-11 71.6 79 54.4
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 5.7e-11 71.6 79 54.4
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 5.7e-11 71.6 161 41.0
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 5.7e-11 71.6 196 36.7
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 5.7e-11 71.6 71 56.3
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 7.5e-11 71.2 99 42.4
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 7.5e-11 71.2 167 41.9
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 7.5e-11 71.2 167 41.9
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 9.8e-11 70.9 72 56.9
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.3e-10 70.5 133 39.1
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 1.3e-10 70.5 79 54.4
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 1.3e-10 70.5 79 54.4
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 2.2e-10 69.7 169 37.3
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 2.9e-10 69.3 71 56.3
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 2.9e-10 69.3 73 56.2
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 3.7e-10 68.9 168 33.9
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 6.4e-10 68.2 71 49.3
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 6.4e-10 68.2 167 41.3
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 6.4e-10 68.2 72 56.9
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 1.1e-09 67.4 170 36.5
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.1e-09 67.4 78 48.7
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 1.4e-09 67.0 76 52.6
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 1.8e-09 66.6 162 37.7
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 1.8e-09 66.6 72 51.4
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 3.2e-09 65.9 174 34.5
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 3.2e-09 65.9 174 34.5
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 4.1e-09 65.5 168 36.3
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 5.4e-09 65.1 177 35.0
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 5.4e-09 65.1 177 35.0
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 5.4e-09 65.1 177 35.0
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 7.0e-09 64.7 171 31.6
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.2e-08 63.9 164 33.5
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.2e-08 63.9 164 33.5
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 2.7e-08 62.8 176 43.8
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 3.5e-08 62.4 68 55.9
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 4.6e-08 62.0 71 52.1
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 5.9e-08 61.6 172 41.3
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 7.8e-08 61.2 77 48.1
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 2.3e-07 59.7 72 48.6
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 5.0e-07 58.5 154 34.4
HanXRQChr17g0545191 Helianthus annuus HOM05D005097 ORTHO05D006186 5.0e-07 58.5 71 56.3
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 8.6e-07 57.8 174 39.7
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 1.1e-06 57.4 162 34.6
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 2.5e-06 56.2 138 34.8
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 3.3e-06 55.8 174 31.0
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 5.6e-06 55.1 77 44.2
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 7.3e-06 54.7 170 42.9
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 7.3e-06 54.7 73 46.6
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 9.5e-06 54.3 163 30.1


User provided reference genes

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