Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 0.0e+00 1399.4 802 100.0
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 3.5e-301 1038.1 712 82.7
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.5e-301 1038.1 715 82.0
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 3.2e-262 908.7 711 70.9
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.5e-251 873.2 707 67.8
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 3.7e-250 868.6 714 67.5
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.5e-246 856.7 711 67.2
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 8.8e-244 847.4 719 66.2
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 3.7e-242 842.0 715 65.5
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.7e-242 842.0 741 64.8
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 6.3e-242 841.3 713 65.5
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 8.2e-242 840.9 714 66.2
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.0e-239 831.6 696 65.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 8.5e-239 830.9 715 64.9
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 7.2e-238 827.8 717 64.7
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 2.1e-237 826.2 712 64.5
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 2.7e-237 825.9 703 66.1
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.0e-236 822.4 713 64.7
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.2e-235 820.5 708 64.1
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 3.4e-235 818.9 721 63.2
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 7.5e-235 817.8 713 64.1
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 4.1e-233 812.0 717 63.6
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 5.4e-233 811.6 711 65.0
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.4e-233 811.6 735 62.9
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.2e-232 810.4 715 64.3
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 4.5e-232 808.5 717 63.5
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 1.5e-230 803.5 717 63.9
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.5e-230 803.5 714 64.4
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.2e-229 800.4 801 58.6
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 2.8e-229 799.3 723 63.5
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 3.6e-229 798.9 709 62.8
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.8e-228 796.6 715 62.7
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 2.3e-228 796.2 721 63.2
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 4.0e-228 795.4 718 61.6
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 6.8e-228 794.7 660 65.2
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 8.9e-228 794.3 659 65.3
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 1.7e-226 790.0 715 64.1
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 2.8e-226 789.3 697 63.4
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 4.9e-226 788.5 716 62.6
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.4e-225 786.9 718 62.5
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 5.4e-225 785.0 721 62.4
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 9.2e-225 784.3 711 63.7
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 2.0e-224 783.1 705 62.6
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 2.0e-224 783.1 684 63.6
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.7e-223 780.0 717 61.6
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 2.9e-223 779.2 710 61.0
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.1e-222 777.3 717 62.2
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.1e-222 777.3 715 61.1
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 3.3e-222 775.8 710 60.7
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 9.5e-222 774.2 716 60.6
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.6e-221 773.5 695 62.6
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 2.1e-221 773.1 715 60.3
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.6e-221 772.3 714 61.2
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 3.6e-221 772.3 706 62.0
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 1.4e-220 770.4 716 60.3
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.4e-220 770.4 661 65.8
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 6.8e-220 768.1 713 60.7
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 3.4e-219 765.8 714 61.1
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 4.4e-219 765.4 799 57.7
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 7.5e-219 764.6 706 60.5
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 6.4e-218 761.5 706 59.8
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 2.4e-217 759.6 716 59.8
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 7.0e-217 758.1 712 59.8
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 4.6e-216 755.4 701 61.1
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 1.0e-215 754.2 710 60.3
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 3.3e-214 749.2 715 58.9
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.8e-213 746.1 712 59.1
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 8.0e-213 744.6 687 61.3
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 1.7e-210 736.9 722 59.6
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.9e-210 736.1 694 60.4
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 1.4e-209 733.8 710 58.3
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.7e-207 726.9 712 58.3
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.7e-207 726.9 712 58.3
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.1e-207 725.3 782 56.1
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 3.6e-205 719.2 717 58.3
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 7.1e-201 704.9 733 56.8
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.6e-197 693.7 721 57.8
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.9e-196 688.0 660 60.5
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.0e-195 686.8 713 56.9
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 2.4e-193 679.9 712 56.5
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.4e-193 679.9 715 59.3
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 3.2e-193 679.5 691 56.4
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.7e-191 673.7 715 56.6
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 6.2e-189 665.2 759 53.6
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 6.2e-189 665.2 661 57.9
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.1e-188 664.5 713 55.4
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 3.5e-176 622.9 716 53.1
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 3.3e-174 616.3 663 55.5
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 7.6e-171 605.1 719 51.2
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 1.6e-160 570.9 708 50.3
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 2.8e-157 560.1 594 57.7
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 2.1e-144 517.3 566 54.4
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.5e-129 466.1 545 52.5
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 8.0e-128 462.2 581 50.8
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 5.7e-126 456.1 348 71.0
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 3.1e-124 450.3 425 60.9
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.9e-121 441.0 346 68.5
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 4.0e-119 433.3 428 60.3
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.4e-111 408.3 290 74.5
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.6e-110 404.1 334 75.1
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 1.6e-107 394.8 371 60.4
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 1.2e-102 378.6 266 75.9
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 3.7e-85 320.5 417 48.7
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.7e-77 295.0 689 31.9
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 8.4e-77 292.7 686 32.7
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.2e-76 290.8 502 42.0
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 1.0e-74 285.8 272 59.2
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 4.3e-73 280.4 670 30.4
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 2.2e-69 268.1 346 49.4
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 5.4e-68 263.5 697 32.4
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-62 245.7 435 41.6
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 5.1e-58 230.3 726 28.2
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.4e-28 132.5 135 56.3
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 7.7e-22 110.2 144 48.6
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.5e-20 105.1 166 44.6
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.5e-20 105.1 73 65.8
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 4.4e-17 94.4 111 49.5
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.2e-16 92.0 167 37.7
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 2.8e-16 91.7 494 22.1
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 5.3e-15 87.4 150 39.3
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.0e-14 85.5 55 81.8
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 3.5e-14 84.7 99 48.5
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 5.0e-13 80.9 99 44.4
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 6.5e-13 80.5 104 50.0
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 8.5e-13 80.1 107 46.7
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 9.4e-12 76.6 68 58.8
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 1.6e-11 75.9 70 52.9
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 5.2e-10 70.9 62 58.1
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.2e-09 69.7 230 29.1
ECA233G3264 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.5e-09 67.0 64 56.2
ECA236G1167 Erigeron canadensis HOM05D000048 ORTHO05D000207 8.3e-08 63.5 63 55.6
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 8.3e-08 63.5 106 34.0
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.4e-07 62.8 41 80.5
ECA240G3130 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.4e-07 60.8 63 54.0
ECA236G1492 Erigeron canadensis HOM05D000017 ORTHO05D017904 7.0e-07 60.5 72 50.0
ECA233G2665 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-06 59.7 66 50.0
ECA246G2020 Erigeron canadensis HOM05D000017 ORTHO05D017904 1.2e-06 59.7 72 50.0
ECA238G0910 Erigeron canadensis HOM05D000017 ORTHO05D000106 2.0e-06 58.9 63 50.8
ECA238G3207 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.7e-06 58.5 63 52.4
ECA247G0905 Erigeron canadensis HOM05D000610 ORTHO05D002583 2.7e-06 58.5 48 62.5
ECA232G0557 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA232G3219 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA233G2683 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA233G4715 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA234G0932 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA234G2069 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 52.4
ECA234G2417 Erigeron canadensis HOM05D000015 ORTHO05D000270 3.5e-06 58.2 63 50.8
ECA236G2578 Erigeron canadensis HOM05D001306 ORTHO05D001159 3.5e-06 58.2 63 50.8
ECA236G4734 Erigeron canadensis HOM05D000537 ORTHO05D000415 3.5e-06 58.2 63 50.8
ECA238G0708 Erigeron canadensis HOM05D000506 ORTHO05D000369 3.5e-06 58.2 63 50.8
ECA240G2795 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA246G2582 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA247G3508 Erigeron canadensis HOM05D001162 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA248G1033 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA248G1220 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA248G2732 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 58.2 63 50.8
ECA248G3666 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.5e-06 58.2 63 50.8
ECA232G2441 Erigeron canadensis HOM05D002427 ORTHO05D002818 4.5e-06 57.8 63 50.8
ECA234G1801 Erigeron canadensis HOM05D000017 ORTHO05D017904 5.9e-06 57.4 72 48.6
ECA240G1324 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.7e-06 57.0 63 49.2


User provided reference genes

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