Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2343 Erigeron canadensis HOM05D002462 ORTHO05D011211 2.0e-84 315.8 174 100.0
ECA240G0435 Erigeron canadensis HOM05D002462 ORTHO05D002893 8.6e-19 97.8 115 47.0
QL93p0107_0053 Quercus lobata HOM05D002462 ORTHO05D007680 2.1e-17 93.2 104 49.0
PGR031G0384 Punica granatum HOM05D002462 ORTHO05D002893 3.4e-15 85.9 104 47.1
Cpa.g.sc29.105 Carica papaya HOM05D002462 ORTHO05D002893 4.4e-15 85.5 104 44.2
ECA234G0278 Erigeron canadensis HOM05D002462 ORTHO05D011211 9.8e-15 84.3 105 47.6
Sed0008444 Sechium edule HOM05D002462 ORTHO05D002893 1.3e-14 84.0 109 45.0
Actinidia22451 Actinidia chinensis HOM05D002462 ORTHO05D002893 1.1e-13 80.9 101 44.6
QL02p102882 Quercus lobata HOM05D002462 ORTHO05D002893 1.8e-13 80.1 101 43.6
BraA09t41742Z Brassica rapa HOM05D002462 ORTHO05D002893 3.0e-11 72.8 118 39.8
CBR_g6631 Chara braunii HOM05D002462 ORTHO05D002893 3.9e-11 72.4 109 39.4
A09p63960 Brassica napus HOM05D002462 ORTHO05D002893 6.6e-11 71.6 118 39.0
Os02g0644100 Oryza sativa ssp. japonica HOM05D002462 ORTHO05D002893 6.6e-11 71.6 104 41.3
Dinv21592 Davidia involucrata HOM05D002462 ORTHO05D002893 1.5e-10 70.5 61 60.7
BcaC07g41712 Brassica carinata HOM05D002462 ORTHO05D002893 1.9e-10 70.1 105 41.0
C08p47480 Brassica napus HOM05D002462 ORTHO05D002893 1.9e-10 70.1 105 41.0
Zm00001eb186100 Zea mays HOM05D002462 ORTHO05D002893 1.9e-10 70.1 103 40.8
AL6G17820 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 4.3e-10 68.9 65 50.8
AL1G23580 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 5.6e-10 68.6 105 37.1
BolC8t52289H Brassica oleracea HOM05D002462 ORTHO05D002893 7.3e-10 68.2 105 40.0
Zm00001eb248730 Zea mays HOM05D002462 ORTHO05D002893 7.3e-10 68.2 103 39.8
Actinidia34773 Actinidia chinensis HOM05D002462 ORTHO05D002893 1.6e-09 67.0 62 54.8
Actinidia16921 Actinidia chinensis HOM05D002462 ORTHO05D002893 2.1e-09 66.6 103 37.9
Actinidia22441 Actinidia chinensis HOM05D002462 ORTHO05D002893 2.1e-09 66.6 103 37.9
AL1G23570 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 2.8e-09 66.2 112 34.8
ECA248G1597 Erigeron canadensis HOM05D002462 ORTHO05D002893 4.7e-09 65.5 60 58.3
SalBow6G5274 Salvia bowleyana HOM05D002462 ORTHO05D002893 6.2e-09 65.1 110 36.4
Sed0011066 Sechium edule HOM05D002462 ORTHO05D002893 1.4e-08 63.9 106 41.5
Sp1g10890 Schrenkiella parvula HOM05D002462 ORTHO05D002893 1.5e-07 60.5 105 38.1
PRCOL_00006826 Prasinoderma coloniale HOM05D002462 ORTHO05D002893 2.0e-07 60.1 109 35.8
PGR042G3651 Punica granatum HOM05D002462 ORTHO05D002893 2.6e-07 59.7 100 39.0
Aa31LG2G280 Aethionema arabicum HOM05D002462 ORTHO05D002893 5.8e-07 58.5 116 31.9
Mapoly0007s0214 Marchantia polymorpha HOM05D002042 ORTHO05D019658 1.3e-06 57.4 116 35.3
CsaV3_3G003080 Cucumis sativus L. HOM05D002462 ORTHO05D002893 1.7e-06 57.0 104 36.5
Glyma.05G055600 Glycine max HOM05D002462 ORTHO05D002893 2.2e-06 56.6 106 36.8
PGR004G2173 Punica granatum HOM05D006451 ORTHO05D007680 2.9e-06 56.2 111 31.5
MSTRG.25540 Avicennia marina HOM05D002462 ORTHO05D002893 4.9e-06 55.5 110 34.5
CiPaw.06G030600 Carya illinoinensis HOM05D005920 ORTHO05D007211 4.9e-06 55.5 108 32.4
AUR62014341 Chenopodium quinoa HOM05D005920 ORTHO05D007211 6.4e-06 55.1 107 34.6
AUR62019083 Chenopodium quinoa HOM05D005920 ORTHO05D007211 6.4e-06 55.1 107 34.6
Cre03.g189950 Chlamydomonas reinhardtii HOM05D002462 ORTHO05D002893 6.4e-06 55.1 109 31.2
Sp2g01900 Schrenkiella parvula HOM05D002462 ORTHO05D002893 6.4e-06 55.1 106 35.8
Actinidia22452 Actinidia chinensis HOM05D002462 ORTHO05D002893 8.3e-06 54.7 99 33.3


User provided reference genes

Program Settings