Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 3.8e-168 594.7 295 100.0
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 9.7e-132 473.8 297 76.8
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 5.9e-121 438.0 316 71.2
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 2.9e-112 409.1 306 65.0
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 3.3e-111 405.6 303 67.0
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 3.1e-109 399.1 319 62.4
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 4.4e-108 395.2 310 62.9
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 2.7e-105 386.0 317 61.2
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.0e-104 384.0 308 60.7
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 2.3e-104 382.9 307 62.2
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 3.9e-104 382.1 317 59.0
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 3.3e-103 379.0 302 59.3
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 3.3e-103 379.0 315 60.6
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 3.3e-103 379.0 307 61.6
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 4.3e-103 378.6 315 60.3
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 7.3e-103 377.9 315 61.0
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 9.5e-103 377.5 352 55.7
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 1.2e-102 377.1 302 59.3
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 1.2e-102 377.1 321 59.5
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 2.8e-102 375.9 315 59.7
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 5.2e-101 371.7 307 59.0
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 1.2e-100 370.5 310 59.0
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 1.5e-100 370.2 321 58.3
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 1.5e-100 370.2 314 59.2
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 1.5e-100 370.2 317 58.7
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 2.0e-100 369.8 311 60.5
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.6e-100 369.4 313 59.4
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 3.4e-100 369.0 313 58.5
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.4e-100 368.6 310 60.6
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 5.8e-100 368.2 317 57.1
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 7.5e-100 367.9 317 58.0
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.3e-99 367.1 307 58.3
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 2.2e-99 366.3 318 59.1
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 2.2e-99 366.3 316 59.2
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 3.7e-99 365.5 316 58.2
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 1.9e-98 363.2 330 57.3
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 1.9e-98 363.2 308 59.1
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 2.4e-98 362.8 318 58.8
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.1e-98 362.1 310 59.4
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 7.0e-98 361.3 315 59.0
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 7.0e-98 361.3 298 59.7
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 1.2e-97 360.5 320 58.1
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 2.7e-97 359.4 310 59.0
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 1.7e-96 356.7 319 58.3
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 2.3e-96 356.3 312 57.7
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 3.0e-96 355.9 313 56.5
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 3.0e-96 355.9 320 57.5
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 5.1e-96 355.1 324 54.6
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 5.1e-96 355.1 317 58.0
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 6.6e-96 354.8 310 56.5
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 6.6e-96 354.8 313 57.8
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 1.5e-95 353.6 315 55.2
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 2.5e-95 352.8 317 57.4
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 7.3e-95 351.3 311 57.6
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 1.2e-94 350.5 284 61.3
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 2.8e-94 349.4 318 56.9
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 1.1e-93 347.4 320 56.9
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 1.4e-93 347.1 311 57.2
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 1.4e-93 347.1 358 51.1
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 1.8e-93 346.7 324 53.4
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 4.0e-93 345.5 324 54.0
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 6.8e-93 344.7 308 56.2
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 2.0e-92 343.2 308 54.2
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 4.9e-91 338.6 310 55.8
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 6.4e-91 338.2 309 55.3
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 8.3e-91 337.8 307 56.7
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 1.1e-90 337.4 313 55.0
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 3.2e-90 335.9 310 56.8
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 7.1e-90 334.7 267 63.7
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 2.1e-89 333.2 305 55.7
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 2.1e-89 333.2 314 55.4
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 7.8e-89 331.3 305 55.4
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 1.7e-88 330.1 305 55.7
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 1.7e-88 330.1 232 71.1
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 6.6e-88 328.2 306 54.9
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 6.6e-88 328.2 305 55.1
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 8.6e-88 327.8 305 54.4
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 3.3e-87 325.9 317 52.7
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 4.3e-87 325.5 301 55.1
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 7.3e-87 324.7 251 64.5
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 9.5e-87 324.3 310 52.9
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 1.2e-86 323.9 313 53.7
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 5.2e-85 318.5 326 52.1
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 9.9e-84 314.3 229 68.1
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 1.7e-83 313.5 230 69.1
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 4.2e-82 308.9 226 67.7
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 1.2e-81 307.4 325 49.5
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.5e-81 305.8 235 63.4
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 5.1e-80 302.0 313 49.8
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 2.5e-79 299.7 315 50.2
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 5.6e-79 298.5 325 48.6
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.9e-75 286.2 310 50.6
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.4e-74 283.9 311 50.8
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 1.9e-74 283.5 293 50.5
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 3.9e-72 275.8 293 48.5
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 3.3e-71 272.7 316 49.1
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 3.3e-71 272.7 305 50.2
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 4.2e-66 255.8 240 52.1
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 2.7e-65 253.1 243 53.9
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 4.6e-65 252.3 292 48.6
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 6.0e-65 251.9 301 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 1.0e-64 251.1 260 50.0
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 1.3e-64 250.8 182 63.2
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 1.3e-64 250.8 268 51.1
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 2.3e-64 250.0 322 43.2
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 4.8e-62 242.3 209 55.0
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.4e-61 240.7 172 72.1
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 8.2e-54 214.9 187 61.0
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 1.4e-53 214.2 126 77.8
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 4.5e-52 209.1 145 66.9
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 1.7e-51 207.2 226 52.2
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 3.9e-48 196.1 213 46.0
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 7.9e-41 171.8 305 35.7
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 3.9e-40 169.5 131 60.3
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 7.7e-36 155.2 143 60.1
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 5.0e-35 152.5 229 38.9
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 6.5e-35 152.1 242 39.3
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 1.0e-32 144.8 166 45.8
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 6.7e-32 142.1 144 46.5
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 2.2e-30 137.1 103 63.1
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 3.7e-30 136.3 413 27.6
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 1.1e-29 134.8 264 33.3
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 6.7e-24 115.5 170 41.8
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 2.8e-22 110.2 61 80.3
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.1e-13 81.6 51 68.6
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 1.4e-13 81.3 53 69.8
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 3.5e-12 76.6 55 61.8
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 1.0e-11 75.1 61 57.4
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 1.0e-08 65.1 31 90.3
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 8.8e-08 62.0 40 72.5
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 4.4e-07 59.7 35 71.4
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 1.7e-06 57.8 42 61.9
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 2.8e-06 57.0 39 66.7


User provided reference genes

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