Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1893 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-118 429.1 214 100.0
ECA248G0638 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-75 287.0 209 73.7
ECA238G4695 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-60 235.3 227 52.9
ECA233G4510 Erigeron canadensis HOM05D000013 ORTHO05D000011 9.8e-49 197.6 213 53.5
ECA232G4621 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-48 194.5 250 42.8
ECA238G0150 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-46 190.3 254 42.1
HanXRQChr09g0266471 Helianthus annuus HOM05D000002 ORTHO05D000001 5.9e-46 188.3 248 42.7
HanXRQChr11g0323541 Helianthus annuus HOM05D000002 ORTHO05D025725 1.9e-44 183.3 243 41.6
ECA236G2928 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-43 180.6 208 48.1
ECA238G1806 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-43 179.5 242 40.1
ECA247G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-43 179.1 232 41.8
ECA248G1293 Erigeron canadensis HOM05D001223 ORTHO05D001058 1.8e-42 176.8 120 72.5
ECA238G4116 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-41 171.8 242 39.3
ECA238G2091 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-40 169.9 231 43.7
ECA234G0657 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-40 169.5 241 41.5
ECA234G4404 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-38 162.5 258 40.3
ECA236G2708 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-38 161.4 164 54.3
ECA238G0196 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-37 161.0 192 43.8
ECA233G3640 Erigeron canadensis HOM05D004901 ORTHO05D000001 5.0e-37 158.7 112 63.4
ECA246G1242 Erigeron canadensis HOM05D000308 ORTHO05D000001 5.6e-36 155.2 141 53.2
ECA247G2337 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-35 153.3 217 38.2
ECA233G5539 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-30 137.1 224 39.7
ECA234G1407 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-30 136.0 224 39.3
ECA240G3463 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-29 133.7 133 53.4
ECA255G0002 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-29 133.7 133 53.4
ECA246G3670 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-29 131.7 191 39.3
ECA240G0803 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-28 128.6 185 41.1
ECA240G0692 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-27 126.7 147 48.3
ECA236G4068 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-27 125.2 128 58.6
ECA248G0217 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-26 123.6 175 39.4
ECA232G3329 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-25 119.0 162 44.4
ECA238G3133 Erigeron canadensis HOM05D002428 ORTHO05D005085 1.3e-24 117.5 186 37.6
ECA248G1378 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.3e-24 117.5 151 44.4
ECA234G1537 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-24 117.1 140 45.0
ECA234G0496 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-24 115.5 80 66.2
ECA238G0578 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-23 111.3 108 50.0
ECA233G0883 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-20 102.4 185 38.9
ECA238G2070 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-20 102.1 156 38.5
ECA248G2415 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-18 96.7 118 42.4
CSS0021451 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-15 86.7 179 33.0
ECA232G0227 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-14 82.8 114 39.5
ECA236G1244 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-14 82.8 105 42.9
ECA240G1525 Erigeron canadensis HOM05D000469 ORTHO05D000323 4.6e-14 82.4 115 42.6
ECA240G3804 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-14 81.6 117 45.3
ECA232G0481 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-13 80.9 84 42.9
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-13 80.1 190 31.1
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 3.0e-13 79.7 236 26.3
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-13 78.6 179 31.8
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 6.6e-13 78.6 189 29.6
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 8.6e-13 78.2 234 26.5
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.5e-12 77.4 202 27.2
ECA247G1057 Erigeron canadensis HOM05D004646 ORTHO05D000001 1.9e-12 77.0 105 41.0
ECA236G2036 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-12 75.5 109 45.0
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-11 74.3 211 24.2
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-11 73.6 212 26.4
ECA240G4291 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-11 73.6 64 53.1
PSO832G0334 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-11 73.6 175 28.6
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-11 73.6 194 28.9
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-11 73.6 203 26.6
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 2.8e-11 73.2 203 26.6
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-11 72.0 235 23.8
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-10 71.2 180 26.7
RcHm_v2.0_Chr2g0159441 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-10 70.9 154 28.6
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-10 70.5 190 29.5
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-10 70.1 213 24.9
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-10 69.7 190 24.7
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-10 69.7 208 25.0
ECA240G2212 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-10 69.3 109 40.4
RcHm_v2.0_Chr2g0136201 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-10 69.3 242 22.7
RcHm_v2.0_Chr4g0431731 Rosa chinensis HOM05D009166 ORTHO05D000001 5.2e-10 68.9 225 24.0
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 5.2e-10 68.9 198 25.8
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-10 68.6 194 25.3
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.9e-10 68.6 121 30.6
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 6.9e-10 68.6 168 28.0
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-10 68.2 194 25.3
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 8.9e-10 68.2 186 24.7
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.8 175 26.9
PSO541G4865 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-09 67.8 205 24.4
RcHm_v2.0_Chr3g0448481 Rosa chinensis HOM05D009166 ORTHO05D000001 1.2e-09 67.8 231 26.0
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 67.0 194 25.3
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 67.0 190 26.8
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.0e-09 67.0 214 25.7
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 2.0e-09 67.0 170 30.6
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.6e-09 66.6 168 29.2
RcHm_v2.0_Chr6g0266721 Rosa chinensis HOM05D000002 ORTHO05D000001 2.6e-09 66.6 203 25.6
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-09 66.2 194 25.8
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-09 66.2 224 22.8
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-09 65.5 190 23.7
MD17G1109500 Malus domestica HOM05D000002 ORTHO05D000001 5.8e-09 65.5 209 25.4
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.6e-09 65.1 188 23.9
RcHm_v2.0_Chr5g0058511 Rosa chinensis HOM05D009166 ORTHO05D000001 1.3e-08 64.3 181 24.3
CSS0011881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 63.9 174 25.3
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 63.9 175 25.1
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-08 63.9 201 22.9
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-08 63.9 196 25.5
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-08 63.5 194 24.2
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 2.2e-08 63.5 163 28.8
vmacro07886 Vaccinium macrocarpon HOM05D000422 ORTHO05D011804 2.2e-08 63.5 203 25.6
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 3.8e-08 62.8 203 22.7
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-07 61.2 192 25.0
Nitab4.5_0003766g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.4e-07 60.8 184 25.0
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.9e-07 60.5 190 24.7
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 60.5 209 24.9
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 60.5 210 27.1
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 60.5 210 27.1
PSO017G4051 Papaver somniferum HOM05D000002 ORTHO05D000001 1.9e-07 60.5 143 30.1
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 1.9e-07 60.5 158 29.7
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 60.5 185 22.7
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 60.5 199 23.1
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-07 60.1 225 24.4
CSS0045443 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 60.1 194 22.2
PSO066G0001 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-07 60.1 189 24.9
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-07 60.1 175 25.1
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 3.2e-07 59.7 190 27.4
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-07 59.7 148 27.0
CSS0014384 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 59.3 210 24.3
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 59.3 187 24.1
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.2e-07 59.3 201 23.4
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 5.4e-07 58.9 158 30.4
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-07 58.5 136 27.9
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 7.1e-07 58.5 207 26.1
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 7.1e-07 58.5 130 29.2
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 7.1e-07 58.5 134 32.1
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 9.3e-07 58.2 117 30.8
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.3e-07 58.2 228 22.4
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-06 57.8 142 28.2
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.2e-06 57.8 213 24.4
RcHm_v2.0_Chr1g0349331 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.8 182 22.0
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.8 195 23.6
CSS0004364 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.4 209 21.1
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.4 199 23.6
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.4 175 24.0
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.4 187 23.5
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-06 57.4 241 22.4
RcHm_v2.0_Chr3g0482021 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.4 119 27.7
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.0 198 21.7
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 2.1e-06 57.0 133 28.6
PSO478G4447 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-06 57.0 199 24.6
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 57.0 211 22.3
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 57.0 171 22.2
Dinv39044 Davidia involucrata HOM05D000016 ORTHO05D000109 2.7e-06 56.6 118 28.0
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.7e-06 56.6 192 24.0
COL.COLO4_36674 Corchorus olitorius HOM05D042556 ORTHO05D000001 3.5e-06 56.2 221 22.2
FvH4_6g11492 Fragaria vesca HOM05D000002 ORTHO05D000001 3.5e-06 56.2 190 26.8
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-06 56.2 223 22.0
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 3.5e-06 56.2 202 22.3
RcHm_v2.0_Chr2g0112811 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-06 56.2 184 25.0
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-06 56.2 193 26.9
RcHm_v2.0_Chr2g0141981 Rosa chinensis HOM05D000002 ORTHO05D000001 4.6e-06 55.8 231 22.5
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 6.0e-06 55.5 221 21.7
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.0e-06 55.5 206 24.3
THA.LOC104807900 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.0e-06 55.5 159 27.0
RcHm_v2.0_Chr1g0344491 Rosa chinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.1 177 23.7
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.1 232 25.0


User provided reference genes

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