Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 1.6e-103 379.4 191 100.0
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 2.9e-44 182.6 141 65.2
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 5.9e-29 131.7 104 63.5
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 2.9e-20 102.8 93 59.1
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 6.5e-20 101.7 157 47.8
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 3.2e-19 99.4 95 57.9
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 5.5e-19 98.6 145 44.1
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 5.5e-19 98.6 107 53.3
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 7.2e-19 98.2 99 59.6
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 7.2e-19 98.2 89 60.7
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.6e-18 97.1 99 58.6
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 2.1e-18 96.7 119 51.3
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 2.1e-18 96.7 161 43.5
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 2.1e-18 96.7 125 50.4
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 3.6e-18 95.9 108 51.9
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 3.6e-18 95.9 92 56.5
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 4.7e-18 95.5 154 42.9
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 1.0e-17 94.4 155 45.2
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 1.0e-17 94.4 157 45.2
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 1.0e-17 94.4 84 61.9
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 1.4e-17 94.0 150 44.7
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 1.8e-17 93.6 80 63.8
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 2.3e-17 93.2 91 59.3
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 3.0e-17 92.8 85 58.8
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 3.0e-17 92.8 95 57.9
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 4.0e-17 92.4 151 43.7
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 4.0e-17 92.4 156 42.3
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 4.0e-17 92.4 102 57.8
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 6.7e-17 91.7 155 42.6
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 6.7e-17 91.7 113 47.8
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 8.8e-17 91.3 97 52.6
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 8.8e-17 91.3 124 45.2
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.2e-16 90.9 89 58.4
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-16 90.9 89 58.4
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.2e-16 90.9 151 43.7
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.2e-16 90.9 106 51.9
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.5e-16 90.5 89 58.4
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.5e-16 90.5 89 57.3
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.5e-16 90.5 151 42.4
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 1.5e-16 90.5 77 61.0
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 2.0e-16 90.1 115 50.4
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 2.0e-16 90.1 90 53.3
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 2.0e-16 90.1 156 41.7
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.0e-16 90.1 139 42.4
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 2.0e-16 90.1 64 70.3
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 2.0e-16 90.1 88 56.8
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.6e-16 89.7 64 68.8
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 2.6e-16 89.7 83 59.0
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 2.6e-16 89.7 151 42.4
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 2.6e-16 89.7 147 42.2
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 3.3e-16 89.4 82 61.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 4.4e-16 89.0 112 45.5
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 5.7e-16 88.6 83 59.0
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 7.5e-16 88.2 76 61.8
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 9.7e-16 87.8 90 52.2
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 9.7e-16 87.8 88 53.4
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 9.7e-16 87.8 88 55.7
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 1.3e-15 87.4 107 49.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.3e-15 87.4 79 62.0
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.3e-15 87.4 83 59.0
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 1.3e-15 87.4 147 42.9
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 1.3e-15 87.4 134 42.5
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 1.7e-15 87.0 154 40.9
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 2.2e-15 86.7 82 57.3
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 2.2e-15 86.7 149 42.3
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 3.7e-15 85.9 102 44.1
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 3.7e-15 85.9 77 59.7
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 3.7e-15 85.9 83 59.0
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 6.3e-15 85.1 55 80.0
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 6.3e-15 85.1 68 60.3
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 6.3e-15 85.1 85 52.9
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 6.3e-15 85.1 85 52.9
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.2e-15 84.7 110 45.5
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 8.2e-15 84.7 138 38.4
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.4e-14 84.0 163 38.0
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 1.8e-14 83.6 84 57.1
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 4.1e-14 82.4 82 59.8
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 4.1e-14 82.4 86 53.5
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 4.1e-14 82.4 64 67.2
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 9.1e-14 81.3 103 47.6
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.2e-13 80.9 136 44.1
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 1.6e-13 80.5 90 51.1
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 2.0e-13 80.1 89 51.7
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.0e-13 80.1 90 51.1
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 2.0e-13 80.1 90 51.1
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 3.5e-13 79.3 146 37.7
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 4.5e-13 79.0 90 51.1
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 7.7e-13 78.2 90 50.0
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 1.3e-12 77.4 90 52.2
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 1.3e-12 77.4 121 39.7
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 8.5e-12 74.7 127 37.8
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 4.2e-11 72.4 134 37.3
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 1.2e-10 70.9 117 41.0
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 1.2e-10 70.9 83 50.6
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 4.0e-09 65.9 91 48.4
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 4.0e-09 65.9 43 79.1
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 6.8e-09 65.1 70 48.6
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 1.5e-08 63.9 76 46.1
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 3.7e-07 59.3 64 48.4
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 7.0e-06 55.1 63 44.4


User provided reference genes

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