Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 2.9e-241 838.2 428 100.0
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.9e-176 622.9 388 84.5
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 3.1e-171 605.5 419 77.8
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 5.9e-146 521.5 385 71.2
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 4.2e-144 515.4 384 69.3
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 7.2e-144 514.6 429 64.1
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 3.6e-143 512.3 385 70.1
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 4.0e-142 508.8 401 65.3
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 8.8e-142 507.7 432 63.2
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.2e-140 503.1 440 62.7
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 2.8e-140 502.7 372 68.8
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 3.7e-140 502.3 372 68.8
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 6.3e-140 501.5 400 66.5
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 8.3e-140 501.1 391 66.0
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 8.3e-140 501.1 372 68.5
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 1.8e-139 500.0 429 62.0
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 3.1e-139 499.2 389 67.4
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.0e-137 494.2 403 64.0
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 3.8e-137 492.3 422 62.6
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 6.6e-137 491.5 425 62.1
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.3e-136 489.2 426 62.0
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 5.5e-136 488.4 389 65.6
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.7e-135 485.3 431 61.9
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 5.2e-134 481.9 397 64.0
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 6.8e-134 481.5 385 66.5
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 5.7e-133 478.4 371 66.6
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 5.7e-133 478.4 385 64.2
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.3e-132 477.2 424 59.9
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 2.2e-132 476.5 424 59.9
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.7e-132 475.7 424 59.7
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.9e-132 475.3 386 64.2
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 4.9e-132 475.3 426 60.3
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.8e-131 473.4 372 65.3
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.8e-131 473.4 424 59.2
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 2.4e-131 473.0 404 62.4
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.6e-130 470.3 383 65.3
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 3.5e-130 469.2 395 64.6
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.3e-129 466.5 382 63.9
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 5.0e-129 465.3 384 64.8
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 5.0e-129 465.3 393 63.1
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 8.6e-129 464.5 428 60.0
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 2.8e-127 459.5 413 60.8
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 6.1e-127 458.4 403 60.8
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.8e-126 456.8 403 60.8
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.8e-126 456.8 379 63.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 4.0e-126 455.7 396 61.4
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 4.0e-126 455.7 422 59.0
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 4.0e-126 455.7 382 62.6
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 5.2e-126 455.3 429 58.0
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 3.4e-125 452.6 403 60.3
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 7.5e-125 451.4 427 59.3
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 9.8e-125 451.1 423 59.3
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.3e-124 450.7 403 59.6
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 3.7e-124 449.1 372 62.1
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 5.4e-123 445.3 373 61.7
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 2.7e-122 443.0 372 61.8
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.3e-121 440.7 391 59.6
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 3.3e-120 436.0 391 58.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.4e-118 430.6 322 65.8
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 6.8e-118 428.3 408 57.6
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.2e-117 427.6 408 57.8
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 2.0e-117 426.8 326 65.6
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.7e-116 423.7 403 58.3
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.6e-114 415.6 393 58.5
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.8e-114 414.8 368 61.4
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 5.6e-112 408.7 446 53.8
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 7.3e-112 408.3 352 61.6
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 7.3e-112 408.3 428 54.9
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 1.2e-111 407.5 386 57.0
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.2e-111 407.5 364 60.7
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.6e-111 407.1 372 59.7
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.2e-106 391.0 370 56.8
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 8.1e-103 378.3 377 56.8
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 8.9e-102 374.8 405 52.1
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 5.8e-101 372.1 385 53.8
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 7.3e-96 355.1 309 60.2
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 8.4e-92 341.7 254 70.9
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 6.6e-89 332.0 289 60.2
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.4e-86 323.6 412 45.9
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 2.0e-85 320.5 298 60.4
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 7.9e-82 308.5 258 63.2
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 6.7e-65 252.3 273 53.5
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 3.4e-61 240.0 397 37.8
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 5.0e-60 236.1 408 36.8
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 5.0e-60 236.1 391 39.6
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 6.9e-54 215.7 168 69.0
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 1.1e-46 191.8 251 46.2
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 7.2e-43 179.1 208 49.5
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.1e-38 165.2 114 72.8
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 4.2e-35 153.3 162 54.3
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.1e-34 151.0 116 67.2
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 2.9e-20 104.0 78 67.9
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 9.8e-16 89.0 49 83.7
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 2.4e-14 84.3 288 28.1
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 7.0e-14 82.8 345 27.0
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.2e-07 61.2 73 43.8


User provided reference genes

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