Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 3.9e-298 1027.3 507 100.0
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 2.4e-178 629.4 468 70.1
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 7.0e-154 548.1 473 62.2
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 9.8e-148 527.7 471 61.4
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 5.0e-136 488.8 499 53.7
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 2.9e-131 473.0 479 53.0
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 4.9e-131 472.2 508 50.8
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 4.9e-131 472.2 508 50.8
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 7.8e-129 464.9 510 49.6
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.3e-127 459.5 533 49.2
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 4.7e-126 455.7 484 50.8
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 3.1e-125 453.0 483 52.4
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 6.8e-125 451.8 510 49.6
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 3.7e-123 446.0 480 51.2
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 4.9e-123 445.7 473 51.0
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 7.1e-122 441.8 466 51.7
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 4.6e-121 439.1 474 50.0
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 4.6e-121 439.1 496 51.2
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 6.0e-121 438.7 473 49.9
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 5.1e-120 435.6 482 52.1
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 5.1e-120 435.6 494 49.0
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 1.1e-119 434.5 480 49.4
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 4.3e-119 432.6 501 50.1
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 9.5e-119 431.4 477 50.1
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 3.6e-118 429.5 482 51.5
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 4.7e-118 429.1 489 48.9
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 6.2e-118 428.7 482 49.6
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 8.1e-118 428.3 474 50.0
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 8.1e-118 428.3 483 49.3
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 1.1e-117 427.9 485 48.2
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 1.1e-117 427.9 489 48.7
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 1.8e-117 427.2 484 50.8
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 5.2e-117 425.6 495 49.3
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 8.9e-117 424.9 472 50.6
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 8.9e-117 424.9 472 50.6
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 1.2e-116 424.5 508 47.2
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 5.8e-116 422.2 473 50.5
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 9.9e-116 421.4 480 50.0
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 2.9e-115 419.9 474 48.5
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 4.9e-115 419.1 493 49.1
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 1.1e-114 417.9 478 49.6
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 1.4e-114 417.5 471 48.8
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 4.1e-114 416.0 469 50.5
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 5.4e-114 415.6 525 45.7
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 6.0e-113 412.1 492 48.0
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 2.3e-112 410.2 485 46.6
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 3.0e-112 409.8 528 45.1
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 8.6e-112 408.3 484 49.0
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 1.9e-111 407.1 475 46.7
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 9.6e-111 404.8 479 47.2
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 9.6e-111 404.8 528 44.7
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 2.1e-110 403.7 507 44.8
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 8.1e-110 401.7 472 48.1
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 8.1e-110 401.7 505 46.1
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 4.0e-109 399.4 501 44.1
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 1.5e-108 397.5 468 47.6
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 2.6e-108 396.7 473 48.0
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 2.6e-108 396.7 469 47.5
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 1.3e-107 394.4 474 45.6
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 1.3e-107 394.4 474 46.2
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 4.9e-107 392.5 487 44.6
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 8.4e-107 391.7 469 47.3
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 3.2e-106 389.8 476 46.4
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 4.2e-106 389.4 474 44.3
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 9.3e-106 388.3 498 46.4
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 7.8e-105 385.2 486 45.5
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 2.3e-104 383.6 471 45.9
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 2.3e-104 383.6 512 43.8
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 6.6e-104 382.1 473 43.8
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 8.7e-104 381.7 474 43.5
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 2.5e-103 380.2 512 44.1
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 8.1e-102 375.2 474 42.8
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 1.8e-101 374.0 468 45.7
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 6.9e-101 372.1 467 44.3
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 6.9e-101 372.1 473 43.3
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 1.2e-100 371.3 475 42.1
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 3.4e-100 369.8 467 43.3
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 3.4e-100 369.8 465 43.7
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 5.8e-100 369.0 476 44.1
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 1.3e-99 367.9 468 42.9
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 2.9e-99 366.7 510 44.7
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 3.8e-99 366.3 477 41.5
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 3.8e-99 366.3 476 42.6
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 4.2e-98 362.8 470 42.8
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 7.1e-98 362.1 468 42.5
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 1.2e-97 361.3 468 42.7
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 1.2e-97 361.3 468 42.7
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 3.5e-97 359.8 465 41.5
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 4.6e-97 359.4 469 42.4
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 6.0e-97 359.0 466 41.8
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 5.1e-96 355.9 436 48.2
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 8.7e-96 355.1 473 41.9
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 5.6e-95 352.4 463 44.1
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 7.3e-95 352.1 479 43.4
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 1.3e-94 351.3 497 42.7
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 1.6e-94 350.9 514 40.7
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 6.2e-94 349.0 472 42.8
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 6.4e-91 339.0 472 40.5
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 5.5e-90 335.9 469 40.7
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 3.0e-88 330.1 487 40.7
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 2.8e-86 323.6 489 41.1
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 4.8e-86 322.8 478 41.0
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 1.1e-85 321.6 471 40.3
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 1.0e-83 315.1 430 46.3
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.2e-83 313.9 452 40.9
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 3.8e-83 313.2 481 38.5
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 6.0e-81 305.8 489 38.7
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 2.3e-80 303.9 452 41.4
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 1.9e-79 300.8 517 38.5
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 2.6e-76 290.4 467 39.6
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 1.3e-75 288.1 472 38.3
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 4.6e-73 279.6 481 35.6
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 3.9e-72 276.6 500 35.4
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 3.3e-71 273.5 361 42.4
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.8e-70 270.4 470 35.7
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.8e-70 269.6 470 35.3
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.2e-68 265.0 452 37.6
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 1.5e-68 264.6 464 36.6
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.3e-67 261.5 376 39.9
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 8.5e-67 258.8 210 59.5
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.1e-65 254.2 465 35.3
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 2.7e-65 253.8 520 34.0
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.1e-65 252.7 465 35.1
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 3.9e-64 250.0 459 34.4
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 2.0e-63 247.7 433 36.7
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-58 231.5 473 34.2
Hma1.2p1_1201F.1_g266660 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-58 231.5 405 35.8
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-58 231.5 473 34.2
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 1.6e-52 211.5 283 43.8
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 3.1e-45 187.2 171 53.8
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 3.2e-42 177.2 330 36.4
Prupe.3G136600 Prunus persica HOM05D004790 ORTHO05D005678 6.3e-38 162.9 143 58.7
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 8.5e-35 152.5 472 27.3
Pp3c8_24840 Physcomitrium patens HOM05D004790 ORTHO05D005678 1.2e-23 115.5 148 37.8
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 1.5e-23 115.2 419 27.9
Mapoly0001s0243 Marchantia polymorpha HOM05D004790 ORTHO05D005678 1.4e-21 108.6 219 30.6
Sabra13G0109400 Salix brachista HOM05D004790 ORTHO05D005678 1.3e-19 102.1 83 57.8
Pp3c23_21860 Physcomitrium patens HOM05D004790 ORTHO05D005678 2.3e-19 101.3 435 24.6
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 8.6e-19 99.4 396 27.5
SMO111G0050 Selaginella moellendorffii HOM05D004790 ORTHO05D005678 1.6e-17 95.1 195 32.8
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 1.5e-15 88.6 395 22.5
GSVIVG01029526001 Vitis vinifera HOM05D004790 ORTHO05D005678 3.4e-15 87.4 68 60.3
TPR.G11082 Trifolium pratense HOM05D004790 ORTHO05D005678 5.8e-15 86.7 208 31.2
Sabra13G0113000 Salix brachista HOM05D004790 ORTHO05D005678 8.3e-14 82.8 80 47.5
Sabra13G0109000 Salix brachista HOM05D000001 ORTHO05D000424 2.4e-13 81.3 54 63.0
FAN05G5117 Fragaria x ananassa HOM05D000001 ORTHO05D000424 4.6e-12 77.0 58 58.6
Hma1.2p1_0002F.1_g002210 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.0e-11 75.9 304 24.7
AagrBONN_evm.TU.Sc2ySwM_228.2505 Anthoceros agrestis HOM05D004790 ORTHO05D005678 4.3e-10 70.5 123 29.3
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 2.1e-09 68.2 205 28.3
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 4.7e-09 67.0 184 25.5
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 9.8e-07 59.3 53 43.4
FAN05G5699 Fragaria x ananassa HOM05D004790 ORTHO05D005678 2.2e-06 58.2 95 43.2


User provided reference genes

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