Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 2.3e-155 552.4 317 100.0
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 9.2e-120 434.1 265 81.9
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 1.7e-102 376.7 267 68.5
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 6.6e-102 374.8 266 69.9
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 8.6e-102 374.4 272 68.8
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 1.1e-101 374.0 267 69.3
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.9e-101 373.2 266 70.7
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 1.2e-100 370.5 263 69.2
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 2.1e-100 369.8 279 67.4
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 8.1e-100 367.9 265 69.8
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 1.8e-99 366.7 266 68.4
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.4e-99 366.3 265 68.7
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 3.4e-98 362.5 261 68.6
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 5.8e-98 361.7 260 67.7
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 9.9e-98 360.9 261 67.4
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 4.9e-97 358.6 261 67.8
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 6.4e-97 358.2 264 68.2
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 2.4e-96 356.3 289 62.3
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 3.2e-96 355.9 263 66.9
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 7.1e-96 354.8 260 66.2
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 7.1e-96 354.8 267 67.0
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 4.6e-95 352.1 275 64.0
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 1.7e-94 350.1 247 69.6
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 3.9e-94 349.0 290 63.1
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 1.5e-93 347.1 257 65.4
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 2.5e-93 346.3 266 62.8
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 2.5e-93 346.3 266 62.8
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 3.3e-93 345.9 273 63.4
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 4.3e-93 345.5 250 67.2
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 9.6e-93 344.4 248 69.8
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 9.6e-93 344.4 273 60.1
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 9.6e-93 344.4 261 65.5
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 1.6e-92 343.6 260 65.0
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 1.6e-92 343.6 269 61.7
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 2.1e-92 343.2 275 63.3
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 3.6e-92 342.4 272 61.0
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 3.1e-91 339.3 273 61.9
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 3.1e-91 339.3 241 68.5
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 1.2e-90 337.4 273 64.5
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 1.5e-90 337.0 276 60.1
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 3.4e-90 335.9 270 60.4
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 4.5e-90 335.5 271 60.5
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 5.8e-90 335.1 263 62.7
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 9.9e-90 334.3 271 62.0
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 2.2e-89 333.2 264 61.7
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 2.9e-89 332.8 264 60.6
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.1e-88 330.9 258 62.4
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 1.1e-88 330.9 257 62.6
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 1.9e-88 330.1 264 62.1
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 1.9e-88 330.1 269 62.8
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 1.9e-88 330.1 269 62.8
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 2.4e-88 329.7 258 62.8
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 9.3e-88 327.8 326 54.6
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 1.6e-87 327.0 264 59.8
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.3e-86 323.9 272 62.1
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 3.9e-86 322.4 241 67.2
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 8.7e-86 321.2 246 63.8
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 1.1e-85 320.9 270 60.0
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 1.3e-84 317.4 281 58.7
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 1.6e-84 317.0 258 62.4
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 1.6e-84 317.0 253 61.3
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.6e-84 317.0 239 64.0
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 1.6e-84 317.0 273 57.1
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 2.8e-84 316.2 278 58.3
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 6.2e-84 315.1 319 52.4
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 6.2e-84 315.1 316 53.8
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 3.1e-83 312.8 269 58.0
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 6.9e-83 311.6 270 58.5
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 3.4e-82 309.3 274 58.8
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 4.5e-82 308.9 262 58.8
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 9.9e-82 307.8 267 59.6
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 1.7e-81 307.0 268 59.7
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 1.1e-80 304.3 266 60.2
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 1.1e-80 304.3 275 57.5
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 1.4e-80 303.9 258 60.9
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 2.7e-79 299.7 262 58.8
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 2.7e-79 299.7 262 58.8
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 3.0e-78 296.2 262 58.4
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 5.1e-78 295.4 272 56.6
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 2.5e-77 293.1 296 54.1
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 2.5e-77 293.1 296 54.1
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 3.7e-76 289.3 272 55.5
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 4.8e-76 288.9 281 54.4
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 1.5e-74 283.9 272 53.7
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 1.1e-72 277.7 269 57.2
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 6.0e-71 271.9 272 53.3
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 5.1e-70 268.9 272 52.9
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 3.4e-66 256.1 196 62.2
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 5.9e-66 255.4 214 60.3
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 1.1e-64 251.1 270 50.4
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 9.3e-64 248.1 169 71.0
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 9.3e-64 248.1 207 58.5
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 3.6e-63 246.1 289 46.0
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 2.4e-59 233.4 303 45.5
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 2.4e-59 233.4 215 57.2
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 5.9e-58 228.8 189 58.2
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 1.4e-54 217.6 208 57.7
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.8e-51 207.2 158 60.1
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 5.9e-50 202.2 278 39.2
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 1.0e-49 201.4 162 62.3
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 2.1e-47 193.7 223 48.4
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 3.0e-38 163.3 136 55.1
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 5.9e-34 149.1 149 57.0
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.5e-32 144.4 146 53.4
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 2.4e-19 100.5 188 34.0
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 7.0e-19 99.0 279 31.2
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 6.6e-17 92.4 245 31.4
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 5.6e-16 89.4 102 45.1
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 2.4e-11 73.9 53 64.2
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 7.0e-11 72.4 126 35.7
Lsat_1_v5_gn_1_77640 Lactuca sativa HOM05D006655 ORTHO05D007986 2.7e-10 70.5 244 26.6
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 2.7e-10 70.5 53 60.4
RcHm_v2.0_Chr5g0050831 Rosa chinensis HOM05D006655 ORTHO05D007986 4.6e-10 69.7 265 26.0
Cfa009833 Carpinus fangiana HOM05D006655 ORTHO05D007986 7.8e-10 68.9 313 25.2
ECA248G0748 Erigeron canadensis HOM05D006655 ORTHO05D007986 7.8e-10 68.9 244 25.4
MD03G1169200 Malus domestica HOM05D006655 ORTHO05D007986 1.0e-09 68.6 244 26.6
EL10Ac4g10174 Beta vulgaris HOM05D006655 ORTHO05D007986 2.3e-09 67.4 244 25.8
FvH4_3g28150 Fragaria vesca HOM05D006655 ORTHO05D007986 2.3e-09 67.4 259 26.6
FAN11G1204 Fragaria x ananassa HOM05D006655 ORTHO05D007986 2.3e-09 67.4 259 26.6
FAN21G0719 Fragaria x ananassa HOM05D006655 ORTHO05D007986 2.3e-09 67.4 244 27.0
MBI13_g19379_MAGBIO Magnolia biondii HOM05D006655 ORTHO05D007986 2.3e-09 67.4 244 27.5
Thhalv10025684m.g Eutrema salsugineum HOM05D006655 ORTHO05D007986 3.0e-09 67.0 261 26.1
AT4G31530 Arabidopsis thaliana HOM05D006655 ORTHO05D007986 3.9e-09 66.6 244 26.6
CARHR239410 Cardamine hirsuta HOM05D006655 ORTHO05D007986 3.9e-09 66.6 244 27.0
FAN16G3233 Fragaria x ananassa HOM05D006655 ORTHO05D007986 5.0e-09 66.2 259 26.6
Rhsim13G0216500 Rhododendron simsii HOM05D006655 ORTHO05D007986 5.0e-09 66.2 244 27.0
Aa31LG2G18820 Aethionema arabicum HOM05D006655 ORTHO05D007986 6.6e-09 65.9 261 26.4
AL7G20510 Arabidopsis lyrata HOM05D006655 ORTHO05D007986 6.6e-09 65.9 244 26.2
arahy.Tifrunner.gnm1.ann1.760I9C Arachis hypogaea HOM05D006655 ORTHO05D007986 6.6e-09 65.9 244 26.6
AUR62039838 Chenopodium quinoa HOM05D006655 ORTHO05D007986 6.6e-09 65.9 244 27.0
Dinv36200 Davidia involucrata HOM05D006655 ORTHO05D007986 6.6e-09 65.9 244 25.8
HanXRQChr01g0023951 Helianthus annuus HOM05D006655 ORTHO05D007986 6.6e-09 65.9 244 24.6
Cpa.g.sc84.14 Carica papaya HOM05D006655 ORTHO05D007986 8.6e-09 65.5 244 25.8
CiPaw.14G115600 Carya illinoinensis HOM05D006655 ORTHO05D007986 8.6e-09 65.5 244 25.8
SEGI_01007 Sequoiadendron giganteum HOM05D006655 ORTHO05D007986 8.6e-09 65.5 245 29.0
GSVIVG01037232001 Vitis vinifera HOM05D006655 ORTHO05D007986 8.6e-09 65.5 244 25.4
BcaNung04132 Brassica carinata HOM05D006655 ORTHO05D007986 1.1e-08 65.1 261 25.7
Cc01_g05880 Coffea canephora HOM05D006655 ORTHO05D007986 1.1e-08 65.1 270 23.7
DCAR_029978 Daucus carota HOM05D006655 ORTHO05D007986 1.1e-08 65.1 248 26.2
AUR62000173 Chenopodium quinoa HOM05D006655 ORTHO05D007986 1.5e-08 64.7 263 25.5
Ciclev10015876m.g Citrus clementina HOM05D006655 ORTHO05D007986 1.5e-08 64.7 244 26.2
Haze_23196 Corylus avellana HOM05D006655 ORTHO05D007986 1.5e-08 64.7 313 24.9
C07p58710 Brassica napus HOM05D006655 ORTHO05D007986 1.9e-08 64.3 279 25.8
QL01p017764 Quercus lobata HOM05D006655 ORTHO05D007986 1.9e-08 64.3 245 25.7
Hund21967 Selenicereus undatus HOM05D006655 ORTHO05D007986 1.9e-08 64.3 272 25.4
Actinidia06937 Actinidia chinensis HOM05D006655 ORTHO05D007986 2.5e-08 63.9 244 26.6
ClCG03G012910 Citrullus lanatus HOM05D006655 ORTHO05D007986 2.5e-08 63.9 269 26.8
CsaV3_1G043150 Cucumis sativus L. HOM05D006655 ORTHO05D007986 2.5e-08 63.9 243 26.3
BolC7t46320H Brassica oleracea HOM05D006655 ORTHO05D007986 3.3e-08 63.5 298 24.8
Duzib168G2063 Durio zibethinus HOM05D006655 ORTHO05D007986 3.3e-08 63.5 244 25.8
Sp7g29360 Schrenkiella parvula HOM05D006655 ORTHO05D007986 3.3e-08 63.5 261 25.3
HPP92_025004 Vanilla planifolia HOM05D006655 ORTHO05D007986 3.3e-08 63.5 244 25.8
Zm00001eb394530 Zea mays HOM05D006655 ORTHO05D007986 3.3e-08 63.5 264 25.0
Lj3g0004618 Lotus japonicus HOM05D006655 ORTHO05D007986 5.6e-08 62.8 322 25.2
MELO3C015152.2 Cucumis melo HOM05D006655 ORTHO05D007986 7.3e-08 62.4 261 26.1
Carub.0007s0904 Capsella rubella HOM05D006655 ORTHO05D007986 9.5e-08 62.0 244 25.8
COL.COLO4_04115 Corchorus olitorius HOM05D006655 ORTHO05D007986 9.5e-08 62.0 246 25.2
Atru.chr3.2616 Acer truncatum HOM05D006655 ORTHO05D007986 1.2e-07 61.6 246 26.4
Gohir.D09G107900 Gossypium hirsutum HOM05D006655 ORTHO05D007986 1.2e-07 61.6 244 25.0
Gorai.006G125600 Gossypium raimondii HOM05D006655 ORTHO05D007986 1.2e-07 61.6 244 25.0
Nn2g14958 Nelumbo nucifera HOM05D006655 ORTHO05D007986 1.2e-07 61.6 244 25.4
THA.LOC104816930 Tarenaya hassleriana HOM05D006655 ORTHO05D007986 1.2e-07 61.6 244 27.0
Medtr8g010700 Medicago truncatula HOM05D006655 ORTHO05D007986 2.1e-07 60.8 246 25.2
TAR623G0880 Trochodendron aralioides HOM05D006655 ORTHO05D007986 2.1e-07 60.8 244 24.6
MSTRG.18452 Avicennia marina HOM05D006655 ORTHO05D007986 2.8e-07 60.5 244 25.0
SGA_v2.0_scaffold8G04557 Striga asiatica HOM05D006655 ORTHO05D007986 4.7e-07 59.7 273 24.5
Solyc01g008920.4 Solanum lycopersicum HOM05D006655 ORTHO05D007986 6.2e-07 59.3 225 24.4
Sopen01g004410 Solanum pennellii HOM05D006655 ORTHO05D007986 6.2e-07 59.3 225 24.4
Thecc.09G243400 Theobroma cacao HOM05D006655 ORTHO05D007986 6.2e-07 59.3 244 25.0
PSO339G6694 Papaver somniferum HOM05D006655 ORTHO05D007986 1.1e-06 58.5 272 24.6
TWI38G0712 Tripterygium wilfordii HOM05D006655 ORTHO05D007986 1.1e-06 58.5 261 25.3
PSO384G1723 Papaver somniferum HOM05D006655 ORTHO05D007986 1.4e-06 58.2 272 23.9
PGR102G2275 Punica granatum HOM05D006655 ORTHO05D007986 1.4e-06 58.2 244 25.8
Gohir.A09G111300 Gossypium hirsutum HOM05D006655 ORTHO05D007986 1.8e-06 57.8 239 24.7
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.8e-06 57.8 54 44.4
Aqoxy1G00312 Aquilegia oxysepala HOM05D006655 ORTHO05D007986 3.1e-06 57.0 258 24.0
CDE08G0434 Ceratophyllum demersum HOM05D006655 ORTHO05D007986 5.2e-06 56.2 218 25.2
unitig_90.g27460 Utricularia gibba HOM05D006655 ORTHO05D007986 6.8e-06 55.8 249 23.7


User provided reference genes

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