Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 6.3e-88 327.4 165 100.0
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.4e-47 191.4 170 64.1
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 9.5e-44 180.6 134 67.9
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.9e-25 117.5 151 45.0
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.3e-24 117.1 151 45.0
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 2.2e-24 116.3 158 42.4
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.2e-24 116.3 151 45.0
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 6.4e-24 114.8 157 41.4
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 1.1e-23 114.0 167 42.5
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.9e-23 113.2 158 44.9
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.9e-23 113.2 156 44.9
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.9e-23 113.2 156 44.9
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.4e-23 112.8 156 42.3
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 3.2e-23 112.5 167 41.9
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.2e-23 112.5 166 42.8
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 5.4e-23 111.7 156 45.5
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 7.1e-23 111.3 171 43.9
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 2.7e-22 109.4 156 43.6
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.7e-22 109.4 156 43.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 4.6e-22 108.6 171 40.4
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 6.0e-22 108.2 156 43.6
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 6.0e-22 108.2 178 40.4
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.9e-22 107.8 158 42.4
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 7.9e-22 107.8 172 39.5
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 7.9e-22 107.8 176 37.5
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.0e-21 107.5 153 43.1
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.0e-21 107.5 158 41.8
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.0e-21 107.5 176 37.5
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-21 107.1 167 40.1
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 1.3e-21 107.1 160 40.6
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.8e-21 106.7 158 41.8
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 1.8e-21 106.7 172 39.0
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 2.3e-21 106.3 170 41.2
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 6.7e-21 104.8 167 40.7
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.1e-20 104.0 171 40.4
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.9e-20 103.2 163 42.9
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.3e-20 102.4 157 42.0
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.6e-20 101.7 161 41.6
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 5.6e-20 101.7 156 39.7
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 9.6e-20 100.9 160 38.1
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.3e-19 100.5 172 38.4
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.6e-19 100.1 158 41.1
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.8e-19 99.4 171 37.4
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 6.2e-19 98.2 168 38.7
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 6.2e-19 98.2 163 38.0
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 6.2e-19 98.2 165 39.4
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 8.1e-19 97.8 171 40.4
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 1.1e-18 97.4 156 37.8
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 1.1e-18 97.4 176 36.9
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 1.4e-18 97.1 164 36.6
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.4e-18 97.1 171 38.6
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.4e-18 96.3 178 37.6
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 3.1e-18 95.9 161 36.6
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 4.0e-18 95.5 159 40.9
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 4.0e-18 95.5 170 35.9
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 5.3e-18 95.1 158 38.6
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 6.9e-18 94.7 168 37.5
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.2e-17 94.0 164 36.0
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.5e-17 93.6 161 36.0
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.6e-17 92.8 167 37.1
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 3.4e-17 92.4 171 39.2
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.5e-17 92.0 162 35.2
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.6e-17 91.3 156 37.2
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.6e-17 91.3 156 37.2
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 9.9e-17 90.9 169 34.3
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.3e-16 90.5 162 34.6
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 2.2e-16 89.7 156 34.6
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 2.2e-16 89.7 157 35.7
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 2.2e-16 89.7 171 36.3
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.9e-16 89.4 155 36.8
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 3.8e-16 89.0 149 40.9
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.8e-16 89.0 160 33.1
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 4.9e-16 88.6 161 34.2
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 8.4e-16 87.8 152 39.5
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.1e-15 87.4 153 34.6
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.1e-15 87.4 155 36.1
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.9e-15 86.7 149 34.9
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.9e-15 86.7 155 36.1
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 3.2e-15 85.9 152 35.5
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.2e-15 85.5 158 36.1
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.3e-15 84.3 155 35.5
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.3e-15 84.3 169 33.1
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 2.1e-14 83.2 160 35.0
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.7e-14 82.8 165 33.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 2.7e-14 82.8 153 35.9
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.5e-14 82.4 164 32.9
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 4.6e-14 82.0 168 30.4
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.0e-13 80.9 156 34.0
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.3e-13 80.5 157 34.4
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.3e-13 80.5 156 34.0
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.3e-13 80.5 158 34.8
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.8e-13 80.1 163 35.0
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 3.0e-13 79.3 170 31.8
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 6.7e-13 78.2 163 33.1
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 6.7e-13 78.2 168 31.5
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.1e-12 77.4 148 31.8
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.5e-12 77.0 166 29.5
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 1.9e-12 76.6 156 38.5
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.9e-12 76.6 159 35.8
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 3.3e-12 75.9 155 32.3
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 5.6e-12 75.1 170 33.5
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 7.4e-12 74.7 170 33.5
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 7.4e-12 74.7 170 33.5
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 7.4e-12 74.7 170 33.5
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 7.4e-12 74.7 159 32.7
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 9.6e-12 74.3 154 34.4
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.6e-11 73.6 200 30.0
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 2.8e-11 72.8 163 30.7
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 6.2e-11 71.6 146 34.9
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.4e-10 70.5 194 29.9
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.4e-10 70.5 169 30.2
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.4e-10 70.5 150 36.0
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 1.8e-10 70.1 167 29.9
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.8e-10 70.1 185 30.8
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 2.4e-10 69.7 193 31.6
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 3.1e-10 69.3 172 29.7
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 5.3e-10 68.6 200 30.5
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 9.0e-10 67.8 142 34.5
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 9.0e-10 67.8 155 36.8
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 1.2e-09 67.4 127 38.6
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.0e-09 66.6 154 31.2
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.4e-09 65.9 157 33.8
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 7.6e-09 64.7 159 30.8
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 7.6e-09 64.7 154 29.9
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 1.3e-08 63.9 173 30.6
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.9e-08 62.0 168 28.0
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 6.5e-08 61.6 155 28.4
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 1.1e-07 60.8 195 27.2
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 4.6e-06 55.5 142 31.7


User provided reference genes

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