Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.8e-61 239.2 130 100.0
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 7.0e-58 227.3 130 93.8
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.7e-56 222.6 130 92.3
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 4.0e-53 211.5 130 86.2
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.2e-53 211.1 130 86.2
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 8.9e-53 210.3 130 85.4
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-52 209.9 128 86.7
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.2e-52 209.9 130 85.4
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.5e-52 209.5 130 83.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.0e-52 209.1 128 84.4
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 2.6e-52 208.8 128 85.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 2.6e-52 208.8 130 83.1
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 3.4e-52 208.4 130 83.8
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.4e-52 208.4 130 83.8
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 4.4e-52 208.0 128 85.2
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 5.7e-52 207.6 130 83.1
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.5e-52 207.2 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.5e-52 207.2 126 84.9
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 83.1
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.3e-51 206.5 130 82.3
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.3e-51 206.5 130 82.3
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 84.4
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.2e-51 205.7 130 83.1
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.2e-51 205.7 130 84.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 84.4
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 3.7e-51 204.9 131 89.3
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 6.3e-51 204.1 128 84.4
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 6.3e-51 204.1 130 83.1
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.1e-50 203.4 130 80.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.1e-50 203.4 128 83.6
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.1e-50 203.4 128 82.0
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.1e-50 203.4 130 80.8
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 83.6
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 83.6
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.4e-50 203.0 127 82.7
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.8e-50 202.6 130 83.8
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.8e-50 202.6 130 82.3
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 9.2e-50 200.3 130 81.5
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 82.8
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 2.0e-49 199.1 130 78.5
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 2.0e-49 199.1 130 80.8
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 2.0e-49 199.1 130 81.5
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.8
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.0
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.7e-49 198.7 127 80.3
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.0
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 7.8e-49 197.2 128 79.7
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 7.8e-49 197.2 126 82.5
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 79.2
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 80.5
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 79.2
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 78.5
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 79.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 78.9
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 78.5
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.6e-48 194.1 134 79.1
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 6.6e-48 194.1 122 83.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 80.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 82.3
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 79.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-47 193.4 125 79.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 77.7
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 78.5
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 77.7
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 3.3e-47 191.8 128 78.1
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 9.5e-47 190.3 126 77.0
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-46 189.9 125 77.6
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-46 189.9 128 77.3
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 3.6e-46 188.3 130 75.4
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 76.6
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 4.7e-46 188.0 130 75.4
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 78.1
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.0e-45 186.8 130 76.9
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 72.7
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.8e-45 186.0 112 87.5
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.2e-45 184.5 132 75.8
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 5.2e-45 184.5 128 74.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 8.9e-45 183.7 128 74.2
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 125 77.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.5e-44 183.0 128 74.2
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 5.8e-44 181.0 119 78.2
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.2e-43 179.1 120 77.5
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.7e-43 178.3 121 78.5
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 4.9e-43 177.9 122 80.3
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 4.1e-42 174.9 128 74.2
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 7.0e-42 174.1 125 78.4
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 2.3e-40 169.1 128 71.9
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 8.6e-40 167.2 136 66.2
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 8.6e-40 167.2 119 73.9
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.1e-39 166.8 103 86.4
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.9e-39 166.0 171 56.7
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 6.2e-38 161.0 128 68.8
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.1e-37 160.2 128 68.0
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.1e-37 160.2 128 68.0
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.0e-37 158.3 104 80.8
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 9.8e-36 153.7 128 60.9
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.2e-35 152.5 128 60.9
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 2.9e-35 152.1 185 51.9
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 4.9e-35 151.4 103 75.7
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.4e-34 149.1 96 78.1
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.6e-33 146.4 92 83.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.6e-33 146.4 116 69.0
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 2.1e-33 146.0 98 76.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.7e-32 142.9 101 79.2
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 4.4e-28 128.3 122 55.7
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 4.6e-25 118.2 92 68.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 5.1e-24 114.8 108 63.9
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.6e-24 114.4 71 78.9
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 7.3e-23 110.9 99 53.5
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 7.3e-23 110.9 94 64.9
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.6e-22 108.6 66 86.4
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 6.2e-22 107.8 92 65.2
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 3.1e-21 105.5 93 63.4
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 8.4e-19 97.4 63 73.0
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 4.2e-18 95.1 62 75.8
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 5.4e-18 94.7 62 77.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.0e-16 90.5 62 71.0
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 1.3e-16 90.1 62 72.6
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 3.0e-16 89.0 64 70.3
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 6.6e-16 87.8 57 82.5
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.1e-15 87.0 64 70.3
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 4.4e-12 75.1 117 34.2
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 3.2e-10 68.9 120 33.3
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 9.3e-10 67.4 61 55.7
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 6.0e-09 64.7 42 76.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.3e-08 63.5 40 80.0


User provided reference genes

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