Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.3e-216 756.1 378 100.0
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 4.3e-164 581.6 378 75.7
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.2e-147 526.9 381 69.6
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.5e-134 482.3 379 64.6
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.5e-129 466.8 379 63.3
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 9.3e-127 457.6 365 63.6
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 7.3e-124 448.0 379 60.7
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.6e-123 446.8 356 63.5
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 8.1e-123 444.5 377 61.3
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.4e-122 443.7 366 62.0
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 2.6e-121 439.5 379 60.4
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 1.3e-120 437.2 380 58.4
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 8.4e-120 434.5 379 57.5
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.2e-119 432.2 379 57.0
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 5.6e-116 421.8 381 57.5
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 5.6e-116 421.8 379 57.8
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.3e-115 420.6 359 60.4
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.6e-115 420.2 380 57.9
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 1.4e-114 417.2 380 56.1
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.0e-114 415.6 353 60.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.0e-113 413.3 376 57.7
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 2.6e-113 412.9 378 54.5
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 5.8e-113 411.8 379 55.4
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 9.9e-113 411.0 379 55.7
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 9.9e-113 411.0 379 54.9
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.3e-112 410.6 375 55.5
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 2.9e-112 409.5 380 56.1
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 3.8e-112 409.1 379 55.1
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 6.4e-112 408.3 378 52.9
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.1e-111 407.5 377 56.0
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 2.4e-111 406.4 378 53.7
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.8e-109 400.2 380 54.7
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 5.1e-109 398.7 365 56.2
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 6.7e-109 398.3 380 54.2
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 8.7e-109 397.9 377 55.4
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 2.5e-108 396.4 380 55.3
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 5.6e-108 395.2 381 54.9
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 9.6e-108 394.4 378 54.5
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 1.3e-107 394.0 379 53.0
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 6.2e-107 391.7 380 53.7
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 8.1e-107 391.3 380 52.9
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.4e-106 389.8 378 52.1
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 5.8e-105 385.2 379 52.8
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 3.8e-104 382.5 379 53.8
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 8.4e-104 381.3 337 58.5
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.4e-103 380.6 378 51.3
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.9e-103 380.2 379 51.5
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 4.3e-100 369.0 365 52.3
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.3e-99 367.5 379 50.4
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.1e-99 366.7 383 52.7
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 2.8e-99 366.3 365 50.7
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 1.5e-97 360.5 363 52.6
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.2e-96 356.7 359 52.4
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.4e-95 354.0 367 50.7
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 7.2e-95 351.7 367 50.7
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.0e-93 347.8 267 68.2
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 3.0e-93 346.3 379 50.4
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 1.6e-91 340.5 365 49.9
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 3.7e-91 339.3 259 66.0
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 6.3e-91 338.6 320 53.4
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 6.3e-91 338.6 378 48.9
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.1e-90 337.8 302 56.3
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.1e-90 335.9 375 48.8
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 8.5e-88 328.2 392 45.4
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.1e-87 327.8 366 47.3
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 2.5e-87 326.6 369 47.4
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 6.1e-86 322.0 380 43.9
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 7.9e-86 321.6 380 43.4
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 5.1e-85 318.9 377 44.6
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 2.0e-84 317.0 383 48.6
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 7.4e-84 315.1 259 64.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 9.7e-84 314.7 364 48.1
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 2.8e-83 313.2 352 46.9
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 9.4e-79 298.1 259 58.7
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 3.9e-77 292.7 375 42.7
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.0e-76 290.4 377 42.4
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 7.4e-76 288.5 373 42.4
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 3.7e-75 286.2 373 42.6
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.4e-74 284.3 373 41.8
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 1.8e-74 283.9 375 42.1
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.3e-72 277.7 270 54.4
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 3.8e-72 276.2 375 40.8
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.5e-71 273.5 375 41.1
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.0e-69 268.1 494 36.4
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 2.6e-68 263.5 376 40.2
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.4e-68 262.7 237 59.9
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 3.5e-65 253.1 377 38.7
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 5.5e-63 245.7 380 38.4
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 3.6e-62 243.0 369 40.1
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 6.1e-54 215.7 375 36.3
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.6e-52 210.3 369 35.8
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.1e-46 190.7 370 34.3
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 6.1e-46 189.1 259 41.3
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 3.2e-42 176.8 367 32.7
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 1.2e-41 174.9 365 32.6
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 3.3e-39 166.8 132 64.4
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 4.0e-37 159.8 144 55.6
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 9.5e-31 138.7 368 30.2
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.4e-29 134.8 118 48.3
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 7.5e-28 129.0 220 35.0
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 8.3e-27 125.6 307 32.2
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 3.2e-26 123.6 169 39.6
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.1e-26 123.2 152 46.7
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 4.6e-25 119.8 303 31.7
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.1e-22 110.9 124 51.6
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 1.2e-20 105.1 114 41.2
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.6e-20 104.0 143 44.8
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 5.4e-18 96.3 97 50.5
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 2.1e-17 94.4 425 24.0


User provided reference genes

Program Settings