Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 2.6e-228 795.0 407 100.0
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 7.1e-149 531.2 297 85.9
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 1.2e-148 530.4 297 84.8
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 1.5e-146 523.5 298 81.5
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 2.4e-141 506.1 298 77.9
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.6e-140 503.4 298 77.5
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 1.3e-139 500.4 298 76.5
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 2.8e-137 492.7 298 76.2
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 6.2e-137 491.5 298 75.8
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 8.1e-137 491.1 298 76.2
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 8.1e-137 491.1 298 75.8
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 1.2e-135 487.3 298 75.5
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 1.2e-135 487.3 298 75.8
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 2.0e-135 486.5 298 75.2
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 7.6e-135 484.6 298 75.2
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 7.6e-135 484.6 297 74.7
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 9.9e-135 484.2 300 74.0
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 3.8e-134 482.3 299 73.9
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 1.9e-133 479.9 298 73.2
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 3.2e-133 479.2 298 73.2
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 5.5e-133 478.4 298 72.8
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 5.5e-133 478.4 298 73.5
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 1.6e-132 476.9 298 72.5
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 2.1e-132 476.5 298 74.5
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 7.9e-132 474.6 298 71.8
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 1.3e-131 473.8 298 72.1
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 1.3e-131 473.8 298 71.8
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 2.3e-131 473.0 295 73.6
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 3.0e-131 472.6 298 71.5
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 3.0e-131 472.6 295 73.2
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 3.9e-131 472.2 295 73.6
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 5.1e-131 471.9 298 71.5
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 8.7e-131 471.1 298 71.5
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.1e-130 470.7 299 72.6
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 1.5e-130 470.3 298 71.5
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 1.5e-130 470.3 298 71.1
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 3.3e-130 469.2 295 71.9
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 4.3e-130 468.8 298 72.5
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 4.3e-130 468.8 331 67.1
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 5.6e-130 468.4 297 71.4
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 7.4e-130 468.0 298 71.8
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 7.4e-130 468.0 298 71.8
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 7.4e-130 468.0 327 65.7
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 1.6e-129 466.8 298 70.8
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 2.8e-129 466.1 298 70.8
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 2.8e-129 466.1 298 71.5
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 3.7e-129 465.7 298 71.8
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 3.7e-129 465.7 298 72.5
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 3.7e-129 465.7 298 71.1
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 4.8e-129 465.3 298 71.8
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 8.2e-129 464.5 296 71.6
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 1.1e-128 464.2 295 71.2
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 1.8e-128 463.4 300 71.0
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 2.4e-128 463.0 298 71.8
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 4.0e-128 462.2 298 70.8
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 5.3e-128 461.8 298 69.5
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 1.2e-127 460.7 298 72.5
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 1.2e-127 460.7 299 71.2
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.5e-127 460.3 298 71.1
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 1.5e-127 460.3 372 61.0
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 2.6e-127 459.5 298 70.5
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 3.4e-127 459.1 298 70.8
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 4.5e-127 458.8 297 69.7
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 5.8e-127 458.4 298 70.8
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 5.8e-127 458.4 298 70.5
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 5.8e-127 458.4 368 62.0
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 1.7e-126 456.8 298 69.1
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 6.5e-126 454.9 298 70.8
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 8.4e-126 454.5 298 69.8
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 1.1e-125 454.1 298 69.1
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 1.9e-125 453.4 297 69.4
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 3.5e-124 449.1 298 70.8
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 1.0e-123 447.6 298 67.8
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 1.8e-123 446.8 297 66.7
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 2.3e-123 446.4 298 67.8
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 2.3e-123 446.4 298 67.4
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 3.0e-123 446.0 298 68.8
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 5.1e-123 445.3 296 67.6
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 5.1e-123 445.3 297 68.0
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 8.7e-123 444.5 297 70.0
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 8.7e-123 444.5 298 67.8
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 1.1e-122 444.1 296 67.6
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 1.1e-122 444.1 303 67.3
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.9e-122 443.4 297 69.7
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 4.3e-122 442.2 298 67.4
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 5.7e-122 441.8 297 67.3
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 7.4e-122 441.4 297 67.7
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 7.4e-122 441.4 298 67.4
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 9.7e-122 441.0 298 67.8
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 6.3e-121 438.3 297 66.3
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 6.3e-121 438.3 299 64.9
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 4.1e-120 435.6 298 66.1
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 5.3e-120 435.3 334 62.9
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 9.0e-120 434.5 298 68.5
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 2.0e-119 433.3 296 66.6
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 3.4e-119 432.6 296 65.9
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 3.8e-118 429.1 307 67.1
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 8.5e-118 427.9 322 63.0
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 4.2e-117 425.6 303 64.7
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 1.7e-113 413.7 297 63.0
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 1.0e-110 404.4 297 63.0
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 9.4e-109 397.9 298 61.7
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 5.1e-107 392.1 262 69.1
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 1.1e-106 391.0 298 63.8
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 4.5e-103 379.0 265 65.3
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 2.9e-102 376.3 250 66.4
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 8.5e-102 374.8 250 68.4
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 7.7e-95 351.7 237 68.4
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 2.1e-92 343.6 295 55.6
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 1.4e-91 340.9 295 52.9
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 3.1e-88 329.7 216 69.9
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 4.1e-88 329.3 201 76.1
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 1.6e-87 327.4 295 51.5
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 2.7e-87 326.6 256 63.3
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 4.2e-85 319.3 289 54.0
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 2.3e-83 313.5 298 51.7
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 2.2e-81 307.0 177 79.7
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 3.5e-79 299.7 177 77.4
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 3.3e-77 293.1 199 64.3
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 3.7e-73 279.6 179 76.0
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 5.4e-64 249.2 181 68.0
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 4.6e-63 246.1 237 47.3
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 5.8e-58 229.2 143 73.4
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.0e-46 191.8 179 49.2
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-46 191.0 170 51.2
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 5.1e-46 189.5 107 82.2
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 7.3e-45 185.7 130 63.1
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 1.1e-43 181.8 120 67.5
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 4.0e-43 179.9 119 67.2
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 7.1e-40 169.1 119 63.9
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 6.2e-36 156.0 153 51.6
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 1.5e-34 151.4 97 71.1
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.3e-30 138.3 99 59.6
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 1.1e-29 135.2 98 61.2
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.5e-29 134.8 96 62.5
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 1.5e-18 98.2 70 58.6
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 5.8e-18 96.3 52 80.8


User provided reference genes

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