Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1353 Erigeron canadensis HOM05D008090 ORTHO05D010156 9.4e-110 400.2 203 100.0
Lsat_1_v5_gn_4_30220 Lactuca sativa HOM05D008090 ORTHO05D010156 5.3e-52 208.4 226 57.5
HanXRQChr17g0565011 Helianthus annuus HOM05D008090 ORTHO05D010156 5.3e-36 155.2 209 50.7
Haze_05542 Corylus avellana HOM05D008090 ORTHO05D010156 2.9e-34 149.4 226 43.4
Dinv30710 Davidia involucrata HOM05D000133 ORTHO05D010156 2.9e-34 149.4 234 43.6
Cfa000975 Carpinus fangiana HOM05D008090 ORTHO05D010156 7.1e-33 144.8 227 43.6
MELO3C002726.2 Cucumis melo HOM05D008090 ORTHO05D010156 9.3e-33 144.4 226 42.5
Lj1P1184T52 Lonicera japonica HOM05D008090 ORTHO05D010156 9.3e-33 144.4 224 47.3
ClCG03G006940 Citrullus lanatus HOM05D008090 ORTHO05D010156 1.6e-32 143.7 225 43.6
RcHm_v2.0_Chr5g0013271 Rosa chinensis HOM05D008090 ORTHO05D010156 1.6e-32 143.7 244 40.2
Lj4g0014733 Lotus japonicus HOM05D008090 ORTHO05D010156 2.1e-32 143.3 230 41.7
Prupe.4G076400 Prunus persica HOM05D008090 ORTHO05D010156 2.1e-32 143.3 239 41.8
Cc09_g09530 Coffea canephora HOM05D008090 ORTHO05D010156 2.7e-32 142.9 219 45.2
EL10Ac4g09546 Beta vulgaris HOM05D008090 ORTHO05D010156 1.3e-31 140.6 220 44.1
RcHm_v2.0_Chr5g0013301 Rosa chinensis HOM05D008090 ORTHO05D010156 6.7e-31 138.3 245 39.2
FAN25G1154 Fragaria x ananassa HOM05D008090 ORTHO05D010156 1.1e-30 137.5 233 39.5
COL.COLO4_06066 Corchorus olitorius HOM05D008090 ORTHO05D010156 7.4e-30 134.8 231 40.7
CsaV3_1G032520 Cucumis sativus L. HOM05D008090 ORTHO05D010156 7.4e-30 134.8 225 40.9
FAN16G3306 Fragaria x ananassa HOM05D008090 ORTHO05D010156 7.4e-30 134.8 233 38.6
MBI07_g21779_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 7.4e-30 134.8 219 42.5
Phvul.002G196300 Phaseolus vulgaris HOM05D008090 ORTHO05D010156 7.4e-30 134.8 219 43.8
Sed0014565 Sechium edule HOM05D008090 ORTHO05D010156 7.4e-30 134.8 230 40.4
MD05G1289100 Malus domestica HOM05D008090 ORTHO05D010156 1.3e-29 134.0 233 39.9
Lalb_Chr03g0037351 Lupinus albus HOM05D008090 ORTHO05D010156 1.6e-29 133.7 222 41.0
Gohir.D06G141600 Gossypium hirsutum HOM05D008090 ORTHO05D010156 2.8e-29 132.9 222 42.8
Gorai.010G165200 Gossypium raimondii HOM05D008090 ORTHO05D010156 2.8e-29 132.9 222 42.8
Medtr4g094608 Medicago truncatula HOM05D008090 ORTHO05D010156 2.8e-29 132.9 223 40.4
Gohir.A06G136400 Gossypium hirsutum HOM05D008090 ORTHO05D010156 8.2e-29 131.3 222 43.2
Psat7g091840 Pisum sativum HOM05D008090 ORTHO05D010156 1.1e-28 131.0 224 39.7
CANSAT35G0881 Cannabis sativa HOM05D008090 ORTHO05D010156 1.8e-28 130.2 230 40.4
AUR62035141 Chenopodium quinoa HOM05D008090 ORTHO05D010156 3.1e-28 129.4 227 41.4
Glyma.05G128100 Glycine max HOM05D008090 ORTHO05D010156 5.3e-28 128.6 216 42.6
TPR.G4884 Trifolium pratense HOM05D000133 ORTHO05D000259 5.3e-28 128.6 214 38.8
Hund17789 Selenicereus undatus HOM05D008090 ORTHO05D010156 6.9e-28 128.3 223 40.4
arahy.Tifrunner.gnm1.ann1.548L12 Arachis hypogaea HOM05D008090 ORTHO05D010156 1.2e-27 127.5 220 40.0
arahy.Tifrunner.gnm1.ann1.S5KLBV Arachis hypogaea HOM05D008090 ORTHO05D010156 1.2e-27 127.5 220 41.4
Rhsim13G0192500 Rhododendron simsii HOM05D008090 ORTHO05D010156 1.5e-27 127.1 233 41.6
Nitab4.5_0029367g0010 Nicotiana tabacum HOM05D008090 ORTHO05D010156 2.0e-27 126.7 219 42.5
Migut.M00932 Erythranthe guttata HOM05D008090 ORTHO05D010156 2.6e-27 126.3 234 38.9
Peaxi162Scf00347g00042 Petunia axillaris HOM05D008090 ORTHO05D010156 2.6e-27 126.3 207 41.5
Solyc02g070900.1 Solanum lycopersicum HOM05D008090 ORTHO05D010156 3.4e-27 125.9 216 41.7
CAN.G257.11 Capsicum annuum HOM05D008090 ORTHO05D010156 4.5e-27 125.6 215 41.4
Sabra04G0043800 Salix brachista HOM05D008090 ORTHO05D010156 4.5e-27 125.6 217 38.7
DCAR_003940 Daucus carota HOM05D000013 ORTHO05D010156 5.9e-27 125.2 150 48.7
Sopen02g019980 Solanum pennellii HOM05D008090 ORTHO05D010156 1.3e-26 124.0 216 40.7
Thecc.06G154700 Theobroma cacao HOM05D008090 ORTHO05D010156 1.7e-26 123.6 231 40.3
Potri.004G065500 Populus trichocarpa HOM05D008090 ORTHO05D010156 3.8e-26 122.5 226 37.2
Manes.17G067400 Manihot esculenta HOM05D008090 ORTHO05D010156 5.0e-26 122.1 238 39.5
MSTRG.7470 Avicennia marina HOM05D008090 ORTHO05D010156 6.5e-26 121.7 234 36.3
FAN11G2783 Fragaria x ananassa HOM05D000133 ORTHO05D010156 6.5e-26 121.7 227 37.4
Nn3g17305 Nelumbo nucifera HOM05D008090 ORTHO05D010156 1.4e-25 120.6 233 39.5
Sc17g0005080 Simmondsia chinensis HOM05D008090 ORTHO05D010156 3.2e-25 119.4 239 38.1
PGSC0003DMG400008320 Solanum tuberosum HOM05D008090 ORTHO05D010156 4.2e-25 119.0 216 40.3
Lj2P974T32 Lonicera japonica HOM05D008090 ORTHO05D010156 1.2e-24 117.5 175 46.3
QL05p059335 Quercus lobata HOM05D008090 ORTHO05D010156 2.1e-24 116.7 237 38.4
TAR629G2487 Trochodendron aralioides HOM05D008090 ORTHO05D010156 6.1e-24 115.2 229 42.4
VMungo0251G0641 Vigna mungo HOM05D008090 ORTHO05D010156 6.1e-24 115.2 211 38.4
FvH4_3g06110 Fragaria vesca HOM05D000133 ORTHO05D000259 1.3e-23 114.0 168 41.1
Ah.00g001040 Amaranthus hybridus HOM05D008090 ORTHO05D010156 9.7e-22 107.8 235 37.9
TWI09G1028 Tripterygium wilfordii HOM05D008090 ORTHO05D010156 1.6e-21 107.1 221 36.7
SGA_v2.0_scaffold1G00152 Striga asiatica HOM05D008090 ORTHO05D010156 3.7e-21 105.9 233 38.2
Ca_18277_v3 Cicer arietinum L. HOM05D000133 ORTHO05D000259 7.7e-19 98.2 176 38.6
TAR629G3101 Trochodendron aralioides HOM05D008090 ORTHO05D010156 7.7e-19 98.2 185 40.0
Aqoxy4G00119 Aquilegia oxysepala HOM05D008090 ORTHO05D010156 1.4e-17 94.0 227 35.2
Oeu019949.1 Olea europaea HOM05D008090 ORTHO05D010156 1.9e-17 93.6 105 49.5
MBI19_g47931_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 2.7e-16 89.7 171 39.8
Os01g0243600 Oryza sativa ssp. japonica HOM05D008090 ORTHO05D010156 1.1e-12 77.8 230 34.8
Nitab4.5_0006300g0040 Nicotiana tabacum HOM05D008090 ORTHO05D010156 1.8e-12 77.0 161 40.4
ATR0681G183 Amborella trichopoda HOM05D008090 ORTHO05D010156 1.0e-10 71.2 208 30.8
Zm00001eb079770 Zea mays HOM05D008090 ORTHO05D010156 1.4e-09 67.4 73 46.6
PGSC0003DMG400008321 Solanum tuberosum HOM05D008090 ORTHO05D010156 4.2e-09 65.9 79 48.1
Ciclev10027155m.g Citrus clementina HOM05D008090 ORTHO05D010156 9.4e-09 64.7 149 31.5
SEGI_25907 Sequoiadendron giganteum HOM05D008090 ORTHO05D010156 9.4e-09 64.7 72 47.2


User provided reference genes

Program Settings