Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 3.1e-259 897.9 441 100.0
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 3.6e-223 778.1 444 85.4
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 6.8e-222 773.9 439 85.0
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.3e-209 733.0 441 79.8
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 3.9e-209 731.5 434 80.2
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 7.8e-202 707.2 433 77.4
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 1.0e-201 706.8 439 77.9
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 1.1e-200 703.4 434 76.0
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.6e-200 701.0 440 75.2
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 5.6e-200 701.0 433 77.1
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 5.6e-200 701.0 434 75.8
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 4.7e-199 698.0 454 74.2
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 6.2e-199 697.6 433 75.1
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 1.4e-198 696.4 433 75.5
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 1.4e-198 696.4 466 72.1
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 4.0e-198 694.9 434 75.3
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 5.3e-198 694.5 433 75.3
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.3e-196 689.9 447 75.2
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 1.7e-196 689.5 433 75.8
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 1.9e-195 686.0 433 74.6
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 3.2e-195 685.3 434 75.3
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 7.1e-195 684.1 433 74.1
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 1.2e-194 683.3 434 74.2
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 1.6e-194 682.9 433 73.7
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.1e-194 682.6 433 73.4
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 2.7e-194 682.2 433 73.9
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 3.5e-194 681.8 439 73.3
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 3.5e-194 681.8 434 74.4
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 1.0e-193 680.2 433 73.2
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 1.0e-193 680.2 433 74.4
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 3.0e-193 678.7 434 74.7
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 5.1e-193 677.9 433 72.7
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.5e-192 676.4 433 73.7
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 3.3e-192 675.2 434 72.8
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 1.3e-191 673.3 433 74.4
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 1.1e-190 670.2 433 72.7
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 5.3e-190 667.9 433 72.5
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.2e-189 666.8 433 73.4
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 2.0e-189 666.0 433 73.9
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 3.4e-189 665.2 434 72.8
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.4e-187 659.8 434 74.4
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 1.9e-187 659.4 434 70.0
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 3.2e-187 658.7 433 71.4
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 9.3e-187 657.1 433 72.1
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.2e-186 656.8 433 73.7
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 1.6e-186 656.4 437 72.1
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 2.1e-186 656.0 434 71.4
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 4.6e-186 654.8 439 69.7
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 4.6e-186 654.8 434 73.3
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 6.0e-186 654.4 433 73.2
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 1.3e-185 653.3 434 70.7
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 1.8e-185 652.9 439 69.2
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 8.7e-185 650.6 439 69.0
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 8.7e-185 650.6 433 72.5
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 9.6e-184 647.1 439 73.1
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 3.7e-183 645.2 459 70.2
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.4e-182 643.3 401 74.6
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.3e-180 636.7 455 66.2
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.9e-180 634.8 429 71.8
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 4.9e-180 634.8 436 70.4
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 7.1e-179 630.9 440 68.0
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 2.5e-176 622.5 433 69.5
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 4.3e-176 621.7 435 70.1
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.1e-175 619.4 429 71.1
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 8.2e-175 617.5 439 66.7
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 1.4e-174 616.7 444 66.0
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 3.1e-174 615.5 435 67.1
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 2.6e-173 612.5 418 71.5
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 1.1e-171 607.1 418 71.3
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 3.3e-168 595.5 360 76.4
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.9e-164 582.4 456 66.0
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 2.9e-164 582.4 433 64.7
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 7.9e-162 574.3 388 70.4
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 1.8e-161 573.2 384 72.1
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.5e-160 570.1 388 69.8
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 7.4e-160 567.8 420 66.9
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 9.7e-160 567.4 342 75.4
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 9.1e-158 560.8 409 65.8
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 2.6e-157 559.3 652 47.9
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 5.9e-157 558.1 435 64.6
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 1.9e-155 553.1 440 62.3
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 7.2e-155 551.2 439 62.6
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 5.9e-149 531.6 349 73.6
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 2.9e-148 529.3 350 72.6
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 4.7e-146 521.9 437 59.0
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 1.3e-143 513.8 429 57.8
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 5.5e-139 498.4 432 60.2
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 8.3e-135 484.6 499 53.3
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 5.3e-134 481.9 389 62.7
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 1.0e-132 477.6 433 57.0
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 3.2e-131 472.6 435 55.6
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.8e-129 466.8 422 58.1
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 4.0e-129 465.7 443 55.1
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 6.3e-127 458.4 339 67.8
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 2.9e-124 449.5 368 59.2
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.1e-123 447.6 426 54.5
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 9.5e-123 444.5 380 60.8
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 1.2e-122 444.1 277 77.3
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 4.0e-121 439.1 278 76.6
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 8.3e-119 431.4 277 75.5
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 1.0e-116 424.5 277 73.3
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 7.3e-115 418.3 277 72.2
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.1e-114 416.8 444 51.6
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 6.8e-113 411.8 433 52.0
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 8.6e-108 394.8 452 45.1
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 2.8e-106 389.8 278 68.3
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 2.8e-106 389.8 439 49.7
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 1.1e-102 377.9 433 49.9
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 5.1e-100 369.0 399 52.4
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 3.3e-99 366.3 279 62.7
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 1.6e-98 364.0 214 80.4
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 6.2e-98 362.1 439 45.8
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 8.1e-98 361.7 214 80.4
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 6.4e-87 325.5 418 45.2
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 1.2e-85 321.2 339 48.4
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.5e-67 261.2 172 70.9
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.5e-67 261.2 172 70.9
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.3e-67 260.0 155 78.1
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 8.1e-66 255.4 163 71.8
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 4.2e-62 243.0 186 64.5
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 2.5e-59 233.8 152 69.1
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 6.9e-49 199.1 123 74.8
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 2.5e-46 190.7 126 67.5
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 9.4e-46 188.7 288 37.2
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 4.6e-45 186.4 126 65.1
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 1.0e-44 185.3 126 65.1
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 5.7e-43 179.5 123 64.2
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.4e-41 174.1 95 85.3
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 5.3e-41 172.9 127 65.4
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 3.6e-37 160.2 174 51.7
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.2e-32 145.2 93 71.0
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 6.5e-31 139.4 112 60.7
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 3.6e-29 133.7 105 63.8
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 7.5e-27 125.9 79 72.2
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 1.4e-25 121.7 109 56.9
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 2.4e-17 94.4 77 61.0
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.2e-15 87.8 45 88.9
CAN.G1725.1 Capsicum annuum HOM05D005203 ORTHO05D006383 1.8e-12 78.2 62 66.1
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 1.8e-12 78.2 48 68.8
PGSC0003DMG401014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.3e-12 77.8 62 64.5
GSVIVG01002825001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.3e-12 77.8 62 66.1
EL10Ac1g01043 Beta vulgaris HOM05D005203 ORTHO05D006383 2.8e-10 70.9 31 90.3
HanXRQChr16g0524371 Helianthus annuus HOM05D005203 ORTHO05D006383 1.6e-08 65.1 39 79.5


User provided reference genes

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