Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1138 Erigeron canadensis HOM05D023078 ORTHO05D003943 1.0e-76 290.0 154 100.0
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 5.8e-27 124.8 147 54.4
ECA234G0512 Erigeron canadensis HOM05D023078 ORTHO05D003943 5.4e-25 118.2 156 52.6
ECA234G0883 Erigeron canadensis HOM05D023078 ORTHO05D003943 5.4e-25 118.2 156 52.6
ECA234G1326 Erigeron canadensis HOM05D023078 ORTHO05D003943 5.4e-17 91.7 133 44.4
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 1.1e-12 77.4 149 43.6
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.8e-12 76.6 144 45.8
ECA234G4595 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.4e-12 76.3 138 39.1
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.0e-11 73.2 145 41.4
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 9.9e-11 70.9 151 39.7
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 1.7e-10 70.1 146 39.0
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 8.4e-10 67.8 138 40.6
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 1.1e-09 67.4 147 41.5
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 1.1e-09 67.4 158 39.2
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 2.4e-09 66.2 148 38.5
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 5.5e-09 65.1 145 39.3
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 5.5e-09 65.1 125 40.8
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.5e-08 62.4 148 38.5
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 4.6e-08 62.0 137 41.6
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 7.9e-08 61.2 162 35.2
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 7.9e-08 61.2 140 39.3
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.9e-08 61.2 140 39.3
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.9e-08 61.2 140 39.3
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.3e-07 60.5 144 37.5
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 1.3e-07 60.5 138 38.4
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 2.3e-07 59.7 161 36.0
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.3e-07 59.7 136 40.4
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 3.0e-07 59.3 151 38.4
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 8.7e-07 57.8 127 36.2
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 8.7e-07 57.8 136 39.7
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 1.1e-06 57.4 147 36.7
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 1.5e-06 57.0 100 43.0
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 1.5e-06 57.0 125 36.8
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.5e-06 57.0 147 34.7
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 1.5e-06 57.0 157 37.6
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 1.9e-06 56.6 145 35.9
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 1.9e-06 56.6 143 37.1
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 1.9e-06 56.6 148 36.5
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.9e-06 56.6 163 34.4
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 1.9e-06 56.6 146 38.4
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 1.9e-06 56.6 129 34.1
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 2.5e-06 56.2 149 34.9
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 3.3e-06 55.8 99 41.4
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 3.3e-06 55.8 144 34.7
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 3.3e-06 55.8 113 36.3
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 4.3e-06 55.5 125 35.2
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 4.3e-06 55.5 136 37.5
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 5.6e-06 55.1 100 43.0
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 5.6e-06 55.1 143 34.3


User provided reference genes

Program Settings