Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G1013 Erigeron canadensis HOM05D002683 ORTHO05D007757 1.4e-98 362.8 173 100.0
HanXRQChr04g0110421 Helianthus annuus HOM05D002683 ORTHO05D007757 4.4e-76 288.1 164 83.5
Lsat_1_v5_gn_5_148721 Lactuca sativa HOM05D002683 ORTHO05D007757 1.7e-72 276.2 177 76.3
DCAR_005279 Daucus carota HOM05D002683 ORTHO05D007757 1.8e-61 239.6 164 68.3
Gohir.D13G115900 Gossypium hirsutum HOM05D002683 ORTHO05D007757 5.3e-61 238.0 164 69.5
CSS0049007 Camellia sinensis var. sinensis HOM05D002683 ORTHO05D007757 1.2e-60 236.9 164 68.3
Gorai.013G130400 Gossypium raimondii HOM05D002683 ORTHO05D007757 1.5e-60 236.5 164 68.9
MBI19_g03278_MAGBIO Magnolia biondii HOM05D002683 ORTHO05D007757 2.0e-60 236.1 171 67.3
Cpa.g.sc48.179 Carica papaya HOM05D002683 ORTHO05D007757 2.6e-60 235.7 144 73.6
Sabra13G0006000 Salix brachista HOM05D002683 ORTHO05D007757 2.6e-60 235.7 162 69.1
Potri.013G007100 Populus trichocarpa HOM05D002683 ORTHO05D007757 3.4e-60 235.3 162 68.5
Actinidia16874 Actinidia chinensis HOM05D002683 ORTHO05D007757 4.5e-60 235.0 164 68.9
Dinv30908 Davidia involucrata HOM05D002683 ORTHO05D007757 4.5e-60 235.0 164 69.5
Sopen01g044240 Solanum pennellii HOM05D002683 ORTHO05D007757 5.8e-60 234.6 162 68.5
PGSC0003DMG400002792 Solanum tuberosum HOM05D002683 ORTHO05D007757 7.6e-60 234.2 162 68.5
CAN.G1076.36 Capsicum annuum HOM05D002683 ORTHO05D007757 1.0e-59 233.8 147 71.4
Gohir.A13G112900 Gossypium hirsutum HOM05D002683 ORTHO05D007757 1.0e-59 233.8 164 68.3
Manes.09G178200 Manihot esculenta HOM05D002683 ORTHO05D007757 1.0e-59 233.8 162 67.9
Oeu053732.1 Olea europaea HOM05D002683 ORTHO05D007757 1.3e-59 233.4 162 67.3
Peaxi162Scf00357g00733 Petunia axillaris HOM05D002683 ORTHO05D007757 2.2e-59 232.6 149 71.1
TWI56G0626 Tripterygium wilfordii HOM05D002683 ORTHO05D007757 2.9e-59 232.3 164 67.7
Migut.B00939 Erythranthe guttata HOM05D002683 ORTHO05D007757 6.5e-59 231.1 164 68.3
GSVIVG01031262001 Vitis vinifera HOM05D002683 ORTHO05D007757 1.1e-58 230.3 162 69.1
PSO761G0375 Papaver somniferum HOM05D002683 ORTHO05D007757 2.5e-58 229.2 164 67.7
vmacro01580 Vaccinium macrocarpon HOM05D002683 ORTHO05D007757 4.2e-58 228.4 164 68.3
Thecc.05G325200 Theobroma cacao HOM05D002683 ORTHO05D007757 5.5e-58 228.0 164 66.5
Atru.BG.140.p Acer truncatum HOM05D002683 ORTHO05D007757 7.1e-58 227.6 145 68.3
CsaV3_2G007210 Cucumis sativus L. HOM05D002683 ORTHO05D007757 9.3e-58 227.3 147 68.7
Aqoxy2G02654 Aquilegia oxysepala HOM05D002683 ORTHO05D007757 1.2e-57 226.9 165 69.1
ClCG02G014790 Citrullus lanatus HOM05D002683 ORTHO05D007757 1.2e-57 226.9 164 64.0
Aa31LG1G5830 Aethionema arabicum HOM05D002683 ORTHO05D007757 1.6e-57 226.5 147 66.7
CiPaw.07G031200 Carya illinoinensis HOM05D002683 ORTHO05D007757 1.6e-57 226.5 162 67.9
Ciclev10000978m.g Citrus clementina HOM05D002683 ORTHO05D007757 2.7e-57 225.7 164 65.9
Nitab4.5_0003838g0050 Nicotiana tabacum HOM05D002683 ORTHO05D007757 2.7e-57 225.7 142 72.5
PSO210G3019 Papaver somniferum HOM05D002683 ORTHO05D007757 2.7e-57 225.7 164 66.5
SalBow7G3902 Salvia bowleyana HOM05D002683 ORTHO05D007757 2.7e-57 225.7 156 69.2
BraA08t35381Z Brassica rapa HOM05D002683 ORTHO05D007757 4.6e-57 224.9 144 68.8
Rhsim11G0097700 Rhododendron simsii HOM05D002683 ORTHO05D007757 6.0e-57 224.6 136 75.0
arahy.Tifrunner.gnm1.ann1.941PVT Arachis hypogaea HOM05D002683 ORTHO05D007757 7.9e-57 224.2 165 63.6
AUR62006768 Chenopodium quinoa HOM05D002683 ORTHO05D007757 1.3e-56 223.4 138 72.5
Medtr1g084190 Medicago truncatula HOM05D002683 ORTHO05D007757 1.3e-56 223.4 146 69.2
VMungo0720G2268 Vigna mungo HOM05D002683 ORTHO05D007757 1.3e-56 223.4 146 69.9
TPR.G2640 Trifolium pratense HOM05D002683 ORTHO05D007757 1.8e-56 223.0 159 64.8
Cc02_g35260 Coffea canephora HOM05D002683 ORTHO05D007757 2.3e-56 222.6 138 76.1
Lalb_Chr06g0167431 Lupinus albus HOM05D002683 ORTHO05D007757 3.9e-56 221.9 162 64.8
Psat6g153200 Pisum sativum HOM05D002683 ORTHO05D007757 3.9e-56 221.9 141 69.5
A08p34690 Brassica napus HOM05D002683 ORTHO05D007757 5.1e-56 221.5 144 67.4
COL.COLO4_05532 Corchorus olitorius HOM05D002683 ORTHO05D007541 5.1e-56 221.5 159 64.2
Sc16g0009160 Simmondsia chinensis HOM05D002683 ORTHO05D007757 5.1e-56 221.5 141 71.6
QL03p016219 Quercus lobata HOM05D002683 ORTHO05D007757 6.7e-56 221.1 171 63.2
Haze_04041 Corylus avellana HOM05D002683 ORTHO05D007541 8.7e-56 220.7 136 72.8
arahy.Tifrunner.gnm1.ann1.K5JNPB Arachis hypogaea HOM05D002683 ORTHO05D007757 1.5e-55 219.9 165 63.0
Phvul.007G202700 Phaseolus vulgaris HOM05D002683 ORTHO05D007757 1.5e-55 219.9 146 69.2
Hund07304 Selenicereus undatus HOM05D002683 ORTHO05D007757 1.5e-55 219.9 164 64.0
MSTRG.20371 Avicennia marina HOM05D002683 ORTHO05D007757 1.9e-55 219.5 164 66.5
Carub.0001s0864 Capsella rubella HOM05D002683 ORTHO05D007757 1.9e-55 219.5 143 67.1
AL1G19790 Arabidopsis lyrata HOM05D002683 ORTHO05D007757 2.5e-55 219.2 162 63.0
BcaB03g13283 Brassica carinata HOM05D002683 ORTHO05D007757 2.5e-55 219.2 144 66.0
AUR62000422 Chenopodium quinoa HOM05D002683 ORTHO05D007757 2.5e-55 219.2 164 62.2
Eucgr.L00254 Eucalyptus grandis HOM05D002683 ORTHO05D007757 3.3e-55 218.8 145 66.2
Thhalv10007508m.g Eutrema salsugineum HOM05D002683 ORTHO05D007757 3.3e-55 218.8 143 68.5
Ah.06g196180 Amaranthus hybridus HOM05D002683 ORTHO05D007757 4.3e-55 218.4 138 68.1
BcaC07g38490 Brassica carinata HOM05D002683 ORTHO05D007757 4.3e-55 218.4 144 66.7
C08p12600 Brassica napus HOM05D002683 ORTHO05D007757 4.3e-55 218.4 144 66.7
BolC8t48898H Brassica oleracea HOM05D002683 ORTHO05D007757 4.3e-55 218.4 144 66.7
CARHR009270 Cardamine hirsuta HOM05D002683 ORTHO05D007757 4.3e-55 218.4 143 67.1
SGA_v2.0_scaffold4G01974 Striga asiatica HOM05D002683 ORTHO05D007757 4.3e-55 218.4 164 66.5
Glyma.20G095700 Glycine max HOM05D002683 ORTHO05D007757 5.7e-55 218.0 146 68.5
Nn3g21801 Nelumbo nucifera HOM05D002683 ORTHO05D007757 5.7e-55 218.0 137 71.5
TAR633G1207 Trochodendron aralioides HOM05D002683 ORTHO05D007757 5.7e-55 218.0 164 64.6
Cfa006719 Carpinus fangiana HOM05D002683 ORTHO05D007541 7.4e-55 217.6 136 72.1
FvH4_6g07800 Fragaria vesca HOM05D002683 ORTHO05D007757 7.4e-55 217.6 147 65.3
THA.LOC104820580 Tarenaya hassleriana HOM05D002683 ORTHO05D007757 9.6e-55 217.2 162 64.2
Lj5g0023373 Lotus japonicus HOM05D002683 ORTHO05D007757 1.3e-54 216.9 148 68.2
PGR083G0299 Punica granatum HOM05D002683 ORTHO05D007757 1.3e-54 216.9 131 74.0
ATR0693G361 Amborella trichopoda HOM05D002683 ORTHO05D007757 1.6e-54 216.5 138 71.0
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 3.7e-54 215.3 145 65.5
FAN09G2929 Fragaria x ananassa HOM05D002683 ORTHO05D007757 3.7e-54 215.3 147 64.6
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 3.7e-54 215.3 145 65.5
Glyma.10G146000 Glycine max HOM05D002683 ORTHO05D007757 3.7e-54 215.3 146 67.8
Prupe.6G310400 Prunus persica HOM05D002683 ORTHO05D007757 3.7e-54 215.3 145 66.9
Sp1g07910 Schrenkiella parvula HOM05D002683 ORTHO05D007757 4.8e-54 214.9 143 65.0
Sed0019928 Sechium edule HOM05D002683 ORTHO05D007757 8.2e-54 214.2 147 66.7
FAN05G3891 Fragaria x ananassa HOM05D002683 ORTHO05D007757 1.1e-53 213.8 156 63.5
RcHm_v2.0_Chr3g0457511 Rosa chinensis HOM05D002683 ORTHO05D007757 1.4e-53 213.4 147 63.9
Eucgr.B01688 Eucalyptus grandis HOM05D002683 ORTHO05D007757 2.4e-53 212.6 131 71.0
Sed0002163 Sechium edule HOM05D002683 ORTHO05D007757 2.4e-53 212.6 167 65.3
QL03p016490 Quercus lobata HOM05D002683 ORTHO05D007757 9.3e-50 200.7 126 70.6
Duzib128G0271 Durio zibethinus HOM05D002683 ORTHO05D007757 2.1e-49 199.5 120 75.0
Os12g0563500 Oryza sativa ssp. japonica HOM05D002683 ORTHO05D007757 7.9e-49 197.6 146 61.0
Nitab4.5_0003044g0120 Nicotiana tabacum HOM05D002683 ORTHO05D007757 3.9e-48 195.3 118 74.6
unitig_899.g14747 Utricularia gibba HOM05D002683 ORTHO05D007757 5.1e-48 194.9 120 74.2
MELO3C004172.2 Cucumis melo HOM05D002683 ORTHO05D007757 6.7e-48 194.5 118 71.2
Zm00001eb028570 Zea mays HOM05D002683 ORTHO05D007757 8.7e-48 194.1 143 59.4
Solyc01g100740.4 Solanum lycopersicum HOM05D002683 ORTHO05D007757 3.3e-47 192.2 116 74.1
AT1G09300 Arabidopsis thaliana HOM05D002683 ORTHO05D007757 2.2e-46 189.5 118 70.3
unitig_42.g32306 Utricularia gibba HOM05D002683 ORTHO05D007757 1.8e-45 186.4 120 70.8
EL10Ac4g09493 Beta vulgaris HOM05D002683 ORTHO05D007757 1.0e-43 180.6 113 69.9
HPP92_010879 Vanilla planifolia HOM05D002683 ORTHO05D007757 2.2e-43 179.5 118 65.3
Lj5A325T77 Lonicera japonica HOM05D002683 ORTHO05D007757 6.5e-43 177.9 138 63.8
Ca_10183_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007757 1.8e-40 169.9 97 75.3
AagrBONN_evm.TU.Sc2ySwM_117.3324 Anthoceros agrestis HOM05D002683 ORTHO05D007757 2.5e-39 166.0 129 59.7
SMO119G0363 Selaginella moellendorffii HOM05D002683 ORTHO05D007757 4.5e-36 155.2 130 50.8
Mapoly0027s0075 Marchantia polymorpha HOM05D002683 ORTHO05D007757 6.5e-35 151.4 124 54.0
Rhsim07G0241000 Rhododendron simsii HOM05D002683 ORTHO05D007757 3.3e-31 139.0 88 72.7
SEGI_11666 Sequoiadendron giganteum HOM05D002683 ORTHO05D007757 9.1e-29 131.0 94 64.9
Pp3c12_9660 Physcomitrium patens HOM05D002683 ORTHO05D007757 1.5e-26 123.6 120 50.0
Duzib177G1111 Durio zibethinus HOM05D002683 ORTHO05D007757 1.2e-25 120.6 96 64.6
Cre01.g046150 Chlamydomonas reinhardtii HOM05D002683 ORTHO05D007757 7.2e-18 94.7 145 34.5
PRCOL_00004757 Prasinoderma coloniale HOM05D002683 ORTHO05D007757 1.1e-13 80.9 134 36.6
Atru.chr2.247 Acer truncatum HOM05D002683 ORTHO05D007541 3.6e-09 65.9 39 79.5
HPP92_010926 Vanilla planifolia HOM05D002683 ORTHO05D007757 1.5e-07 60.5 40 55.0
CDE02G4054 Ceratophyllum demersum HOM05D002683 ORTHO05D007757 1.7e-06 57.0 42 45.2


User provided reference genes

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