Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.3e-95 351.7 176 100.0
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.3e-70 270.0 178 74.7
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 1.4e-69 266.5 185 75.7
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 5.9e-52 208.0 142 73.9
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 5.0e-51 204.9 132 74.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 8.6e-51 204.1 135 71.1
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 7.3e-50 201.1 145 68.3
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 9.5e-50 200.7 150 68.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.6e-49 199.9 149 67.1
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 6.2e-49 198.0 133 72.9
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 8.0e-49 197.6 127 72.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 8.0e-49 197.6 126 73.0
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.1e-48 197.2 140 70.0
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.8e-48 196.4 127 72.4
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 2.3e-48 196.1 123 76.4
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 4.0e-48 195.3 160 60.6
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 4.0e-48 195.3 167 57.5
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 4.0e-48 195.3 126 73.0
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 5.2e-48 194.9 147 68.7
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 6.8e-48 194.5 181 58.6
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 6.8e-48 194.5 127 74.0
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 6.8e-48 194.5 144 66.7
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.2e-47 193.7 124 74.2
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.5e-47 193.4 165 62.4
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.5e-47 193.4 127 73.2
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.0e-47 193.0 146 64.4
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 2.0e-47 193.0 193 57.0
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 2.6e-47 192.6 146 67.8
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 3.4e-47 192.2 156 61.5
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 3.4e-47 192.2 156 61.5
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 3.4e-47 192.2 156 61.5
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 4.4e-47 191.8 156 61.5
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 4.4e-47 191.8 156 61.5
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 4.4e-47 191.8 151 66.2
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 7.5e-47 191.0 166 61.4
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 9.8e-47 190.7 139 69.8
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 9.8e-47 190.7 144 68.1
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 9.8e-47 190.7 133 69.2
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 9.8e-47 190.7 170 60.0
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 1.3e-46 190.3 162 60.5
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.3e-46 190.3 144 66.7
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.3e-46 190.3 142 66.2
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.3e-46 190.3 139 67.6
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.3e-46 190.3 154 61.7
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.7e-46 189.9 121 71.9
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.7e-46 189.9 152 62.5
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.2e-46 189.5 163 60.1
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.2e-46 189.5 123 72.4
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.9e-46 189.1 134 70.9
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.9e-46 189.1 158 62.0
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 3.7e-46 188.7 186 54.3
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.9e-46 188.3 120 72.5
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.9e-46 188.3 120 72.5
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 4.9e-46 188.3 167 58.7
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 6.4e-46 188.0 142 66.2
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 6.4e-46 188.0 167 56.3
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 8.3e-46 187.6 156 63.5
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.1e-45 187.2 109 80.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.4e-45 186.8 133 68.4
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.4e-45 186.0 167 59.9
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.4e-45 186.0 166 60.2
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 3.2e-45 185.7 133 67.7
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 3.2e-45 185.7 133 66.2
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 4.1e-45 185.3 161 59.6
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 4.1e-45 185.3 142 62.7
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 5.4e-45 184.9 165 59.4
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 7.0e-45 184.5 145 63.4
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 9.2e-45 184.1 124 74.2
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 9.2e-45 184.1 121 75.2
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 2.7e-44 182.6 124 68.5
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 4.6e-44 181.8 124 68.5
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 4.6e-44 181.8 145 66.2
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 6.0e-44 181.4 162 61.1
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 1.0e-43 180.6 179 55.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.3e-43 180.3 138 65.9
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.3e-43 180.3 124 70.2
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 2.3e-43 179.5 156 59.0
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 2.3e-43 179.5 153 58.2
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 2.3e-43 179.5 134 65.7
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 3.9e-43 178.7 124 66.9
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 8.6e-43 177.6 128 64.8
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.1e-42 177.2 123 68.3
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.5e-42 176.8 151 60.3
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-42 176.4 151 60.3
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-42 176.4 151 60.3
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.9e-42 176.4 119 68.9
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.5e-42 176.0 151 60.3
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.3e-42 175.6 143 63.6
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 3.3e-42 175.6 119 70.6
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.3e-42 175.6 148 61.5
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.6e-41 173.3 134 65.7
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.6e-41 173.3 171 53.8
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 2.1e-41 172.9 189 54.5
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 6.2e-41 171.4 100 78.0
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.8e-40 169.9 125 66.4
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.1e-40 169.1 185 52.4
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.2e-39 167.2 118 67.8
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.5e-39 166.8 118 66.1
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.1e-34 150.6 120 60.8
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 3.3e-34 149.1 135 60.7
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 3.3e-34 149.1 135 60.7
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 3.3e-34 149.1 135 60.7
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.9e-30 136.0 96 65.6
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.9e-27 125.6 104 65.4
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.6e-25 120.2 105 62.9
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.4e-24 116.3 155 42.6
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 2.0e-23 113.2 121 48.8
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 4.4e-23 112.1 81 63.0
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.4e-21 107.1 120 45.8
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 5.4e-21 105.1 104 51.0
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.1e-17 93.2 70 68.6
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 6.2e-17 91.7 118 39.8
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.4e-14 81.3 50 70.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 5.6e-10 68.6 124 37.9
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 4.9e-06 55.5 71 38.0


User provided reference genes

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