Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 0.0e+00 2290.8 1149 100.0
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 0.0e+00 1187.9 1159 57.7
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 5.1e-245 852.0 1191 45.8
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.3e-179 634.8 1322 35.1
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 3.7e-179 633.3 1322 35.0
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.0e-176 623.6 1221 36.0
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 9.9e-172 608.6 1335 34.0
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 3.8e-171 606.7 1245 34.6
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 4.1e-170 603.2 1267 35.2
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 2.1e-169 600.9 1378 33.3
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 5.6e-167 592.8 1318 33.8
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 7.3e-167 592.4 1189 35.3
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.1e-165 588.6 1401 32.7
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.1e-165 588.6 1276 34.2
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 2.4e-165 587.4 1311 32.2
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 6.9e-165 585.9 1330 33.4
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 6.4e-163 579.3 1201 34.5
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.9e-159 567.8 1227 35.0
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 1.4e-157 561.6 1180 34.0
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.6e-153 548.1 1303 32.2
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.9e-151 541.2 1145 35.1
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.0e-149 533.5 1299 32.6
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 1.7e-147 528.1 1258 33.0
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.7e-147 528.1 1356 31.6
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.9e-147 527.3 1350 31.9
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 6.4e-147 526.2 1337 32.0
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 7.1e-146 522.7 1333 31.4
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 1.3e-144 518.5 1290 31.9
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 2.5e-143 514.2 1192 33.2
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.3e-142 511.9 1333 32.6
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.3e-142 511.9 1226 32.0
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.1e-142 511.1 1345 31.1
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 6.9e-141 506.1 1346 29.9
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.7e-139 501.5 1445 30.0
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.1e-138 498.8 1165 33.7
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 1.6e-137 495.0 1205 32.3
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 2.1e-137 494.6 1310 31.6
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 3.5e-137 493.8 1252 31.8
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 1.3e-136 491.9 1256 31.8
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 3.9e-136 490.3 1186 32.4
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.1e-135 488.8 1289 30.6
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 7.4e-135 486.1 1274 31.6
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 7.4e-135 486.1 1234 31.2
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 7.4e-135 486.1 1249 31.5
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 1.6e-134 485.0 1247 31.8
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 6.3e-134 483.0 1371 30.3
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 9.0e-133 479.2 1221 31.4
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 2.0e-132 478.0 1234 31.0
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 4.5e-132 476.9 1377 29.9
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 1.0e-131 475.7 1280 30.3
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 1.1e-130 472.2 1239 30.9
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 4.6e-129 466.8 1328 30.4
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 6.7e-128 463.0 1219 31.7
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 8.7e-128 462.6 1390 29.6
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 1.5e-127 461.8 1205 29.9
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 8.2e-126 456.1 1323 30.1
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 5.3e-125 453.4 1271 29.7
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 1.2e-124 452.2 1328 29.6
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 7.7e-124 449.5 1324 29.6
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 7.7e-124 449.5 1324 29.6
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 1.0e-123 449.1 1293 29.7
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 1.7e-123 448.4 1281 31.0
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.8e-123 447.2 1481 27.7
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 3.2e-122 444.1 1292 30.2
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 1.2e-121 442.2 1335 29.6
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.2e-121 442.2 1233 31.1
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.6e-121 441.8 1320 28.9
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.4e-120 438.7 1215 29.8
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 3.9e-120 437.2 1554 26.8
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 2.0e-119 434.9 1263 29.5
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 5.7e-119 433.3 1569 27.2
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 7.4e-119 433.0 1266 29.0
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 9.7e-119 432.6 1138 31.6
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 2.2e-118 431.4 1150 31.3
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 2.8e-118 431.0 1303 28.8
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 6.9e-117 426.4 1454 27.6
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 3.4e-116 424.1 1213 29.2
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.7e-116 422.9 1142 31.5
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 1.3e-115 422.2 976 32.6
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.0e-112 412.5 1615 27.0
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 7.2e-106 389.8 1203 28.7
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 4.0e-104 384.0 1282 28.9
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 2.0e-103 381.7 1359 26.4
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 3.2e-98 364.4 1164 27.6
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 4.2e-98 364.0 935 30.1
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 4.7e-97 360.5 1547 26.4
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 6.1e-97 360.1 561 39.0
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.0e-96 359.4 1012 30.5
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 2.3e-96 358.2 833 35.3
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 2.3e-96 358.2 1229 28.1
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 8.8e-96 356.3 1211 27.9
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.9e-91 341.3 947 30.2
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 9.5e-90 336.3 913 32.9
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.8e-89 334.7 913 32.9
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 2.3e-80 305.1 1220 26.4
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.3e-78 299.3 259 55.2
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.8e-77 295.4 757 31.6
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 6.6e-75 287.0 352 44.3
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 9.5e-74 283.1 270 49.6
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 4.9e-70 270.8 1179 26.3
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 6.6e-67 260.4 506 38.5
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 2.5e-66 258.5 560 35.9
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 2.0e-63 248.8 519 32.0
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 3.1e-56 224.9 454 35.2
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.2e-53 214.5 207 54.1
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.1e-52 212.2 360 39.7
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.6e-52 211.1 210 53.3
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 9.6e-50 203.4 200 54.5
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 3.2e-45 188.3 271 36.9
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 8.7e-43 180.3 113 72.6
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.6e-39 168.7 109 70.6
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 2.2e-38 165.6 220 40.0
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 4.9e-38 164.5 116 65.5
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 2.7e-36 158.7 180 47.8
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 5.5e-29 134.4 86 72.1
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 9.6e-26 123.6 1133 21.4
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 1.6e-25 122.9 296 32.8
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.4e-24 119.0 81 69.1
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.6e-23 115.5 82 61.0
AagrBONN_evm.TU.Sc2ySwM_362.1676 Anthoceros agrestis HOM05D004942 ORTHO05D005687 6.3e-17 94.4 421 22.3
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.5e-15 89.7 165 33.3
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 6.5e-14 84.3 84 53.6
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.5e-13 82.4 190 30.0
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 3.9e-11 75.1 124 33.1
Actinidia27213 Actinidia chinensis HOM05D004942 ORTHO05D005687 5.7e-10 71.2 225 32.4
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.8e-09 68.9 84 44.0
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 5.3e-08 64.7 182 33.0
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 6.9e-08 64.3 102 37.3
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.0e-07 62.8 83 42.2
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.5e-07 61.6 83 41.0
SHI10796 Sapria himalayana HOM05D004942 ORTHO05D005687 1.0e-06 60.5 153 28.8


User provided reference genes

Program Settings