Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 3.7e-222 774.6 407 100.0
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 6.6e-163 577.8 389 76.1
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 1.4e-160 570.1 393 75.6
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 2.8e-121 439.5 413 59.6
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 1.8e-115 420.2 413 57.6
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 3.0e-115 419.5 407 58.5
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.5e-114 417.2 415 56.6
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 5.7e-114 415.2 413 55.7
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 9.1e-112 407.9 418 55.0
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 2.0e-111 406.8 413 56.2
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 2.0e-111 406.8 416 57.0
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 4.5e-111 405.6 403 56.8
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 1.7e-110 403.7 414 55.3
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 2.2e-110 403.3 414 55.3
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 2.9e-110 402.9 418 55.3
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 5.0e-110 402.1 418 54.3
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 1.2e-108 397.5 414 55.1
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 1.6e-108 397.1 336 63.4
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 3.6e-108 396.0 410 56.3
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 4.7e-108 395.6 441 51.5
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 4.7e-108 395.6 415 55.4
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 1.4e-107 394.0 406 54.7
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 2.6e-106 389.8 411 55.5
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 4.4e-106 389.0 405 54.1
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 6.3e-105 385.2 416 53.8
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 1.8e-104 383.6 329 61.4
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 7.7e-103 378.3 338 60.1
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 7.7e-103 378.3 424 49.8
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 7.7e-103 378.3 409 52.8
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 1.0e-102 377.9 397 54.7
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 2.9e-102 376.3 415 52.5
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 5.0e-102 375.6 429 52.4
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 2.5e-101 373.2 416 53.4
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 2.5e-101 373.2 406 52.2
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 2.5e-101 373.2 389 54.2
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 5.5e-101 372.1 409 52.8
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 7.2e-101 371.7 406 53.4
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 1.6e-100 370.5 414 51.9
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 4.7e-100 369.0 412 53.2
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.7e-100 369.0 415 51.8
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.0e-99 367.9 398 52.0
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 1.4e-99 367.5 405 52.8
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 5.2e-99 365.5 399 54.1
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 6.7e-99 365.2 390 52.6
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 6.7e-99 365.2 413 51.6
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 8.8e-99 364.8 476 48.9
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 2.0e-98 363.6 419 53.0
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 3.3e-98 362.8 417 51.1
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 7.4e-98 361.7 390 52.6
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.7e-97 360.5 404 54.7
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 4.8e-97 359.0 413 51.1
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 8.2e-97 358.2 368 54.6
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-96 357.1 388 52.3
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 1.8e-96 357.1 400 49.8
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.4e-96 356.7 413 52.1
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 1.2e-95 354.4 420 49.8
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 1.6e-95 354.0 408 51.0
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 5.9e-95 352.1 403 51.6
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 1.0e-94 351.3 453 48.6
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 1.0e-94 351.3 405 51.6
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 2.2e-94 350.1 414 50.2
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 2.2e-94 350.1 366 52.2
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 7.2e-93 345.1 402 50.7
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 1.2e-92 344.4 346 55.5
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 2.1e-92 343.6 409 49.1
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 2.7e-92 343.2 403 49.6
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 4.7e-92 342.4 436 48.6
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.7e-92 342.4 409 49.9
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 6.3e-89 332.0 417 49.6
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 8.3e-89 331.6 368 50.5
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 1.4e-88 330.9 313 56.2
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 9.1e-88 328.2 379 52.0
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 9.1e-88 328.2 399 48.9
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 3.5e-87 326.2 366 52.7
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 1.5e-85 320.9 411 48.2
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 2.5e-85 320.1 411 48.4
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 3.2e-85 319.7 406 48.8
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 3.2e-85 319.7 411 47.9
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 4.2e-85 319.3 419 48.4
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 9.4e-85 318.2 412 48.5
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 2.1e-84 317.0 409 47.7
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 8.8e-83 311.6 376 48.9
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 7.5e-82 308.5 341 50.4
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 9.8e-82 308.1 416 47.8
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 3.1e-80 303.1 337 50.7
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 7.7e-79 298.5 414 43.2
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 4.2e-77 292.7 410 45.1
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 3.0e-75 286.6 334 52.4
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 8.9e-75 285.0 420 44.8
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 1.2e-74 284.6 248 60.9
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 2.0e-74 283.9 414 44.2
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 1.9e-69 267.3 409 43.3
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 1.2e-68 264.6 410 43.7
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 5.8e-66 255.8 242 57.0
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 6.4e-65 252.3 314 47.5
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 3.1e-59 233.4 338 43.2
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 7.5e-58 228.8 193 62.2
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 7.5e-50 202.2 307 44.3
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 9.2e-48 195.3 203 51.7
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 1.0e-46 191.8 379 34.8
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 4.9e-41 172.9 169 53.8
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 7.3e-37 159.1 387 31.8
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 4.4e-34 149.8 416 28.1
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.6e-34 149.1 166 50.0
CSS0031508 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 1.2e-31 141.7 176 54.5
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.1e-31 141.0 130 54.6
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 2.3e-30 137.5 193 46.6
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 3.0e-30 137.1 108 56.5
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.9e-29 134.4 160 44.4
HanXRQChr15g0479941 Helianthus annuus HOM05D006199 ORTHO05D006558 7.6e-26 122.5 75 77.3
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 9.3e-24 115.5 130 46.2
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 6.7e-22 109.4 164 42.1
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 1.9e-21 107.8 200 35.0
Actinidia20510 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.6e-20 104.8 129 48.1
BcaB01g02961 Brassica carinata HOM05D006199 ORTHO05D006558 1.6e-20 104.8 197 41.6
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 1.2e-18 98.6 127 46.5
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.0e-18 97.8 77 53.2
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 7.6e-18 95.9 71 57.7
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.1e-16 92.0 63 61.9
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 2.5e-16 90.9 214 31.3
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.2e-16 90.1 166 38.6
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 2.1e-15 87.8 82 54.9
CDE02G3657 Ceratophyllum demersum HOM05D006199 ORTHO05D006558 3.4e-10 70.5 93 49.5
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 2.1e-07 61.2 275 24.7


User provided reference genes

Program Settings