Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0722 Erigeron canadensis HOM05D002493 ORTHO05D016993 1.7e-109 399.4 211 100.0
ECA234G1598 Erigeron canadensis HOM05D002493 ORTHO05D016993 1.0e-74 283.9 235 70.2
ECA234G1414 Erigeron canadensis HOM05D002493 ORTHO05D016993 9.6e-57 224.2 388 42.3
ECA234G2141 Erigeron canadensis HOM05D002493 ORTHO05D016993 1.2e-22 110.9 193 41.5
ECA246G3061 Erigeron canadensis HOM05D002493 ORTHO05D016993 4.7e-19 99.0 188 36.2
ECA234G0705 Erigeron canadensis HOM05D002493 ORTHO05D016993 1.5e-17 94.0 207 35.3
ECA248G0939 Erigeron canadensis HOM05D000218 ORTHO05D000125 9.7e-17 91.3 148 41.2
vmacro08996 Vaccinium macrocarpon HOM05D002493 ORTHO05D003175 2.7e-11 73.2 161 35.4
Lsat_1_v5_gn_5_59960 Lactuca sativa HOM05D002493 ORTHO05D016993 3.6e-11 72.8 212 29.7
Lsat_1_v5_gn_7_59120 Lactuca sativa HOM05D002493 ORTHO05D016993 1.4e-10 70.9 152 36.2
ATR0307G132 Amborella trichopoda HOM05D002493 ORTHO05D003175 3.4e-09 66.2 97 36.1
Gohir.D05G282900 Gossypium hirsutum HOM05D004055 ORTHO05D004795 5.7e-09 65.5 168 31.0
COL.COLO4_35774 Corchorus olitorius HOM05D004055 ORTHO05D004795 1.3e-08 64.3 167 29.9
Lsat_1_v5_gn_7_61900 Lactuca sativa HOM05D002493 ORTHO05D003175 1.7e-08 63.9 65 49.2
FAN03G1106 Fragaria x ananassa HOM05D002493 ORTHO05D003175 2.2e-08 63.5 148 31.1
Gorai.009G296400 Gossypium raimondii HOM05D004055 ORTHO05D004795 2.2e-08 63.5 168 30.4
unitig_899.g14991 Utricularia gibba HOM05D004055 ORTHO05D004795 2.2e-08 63.5 154 30.5
Duzib106G0075 Durio zibethinus HOM05D002493 ORTHO05D003175 4.8e-08 62.4 77 40.3
FAN10G3393 Fragaria x ananassa HOM05D002493 ORTHO05D003175 4.8e-08 62.4 147 32.7
Gorai.007G352000 Gossypium raimondii HOM05D002493 ORTHO05D003175 4.8e-08 62.4 82 42.7
ECA247G1003 Erigeron canadensis HOM05D002493 ORTHO05D003175 6.3e-08 62.0 227 27.3
Hma1.2p1_0282F.1_g113380 Hydrangea macrophylla HOM05D004055 ORTHO05D004795 6.3e-08 62.0 167 28.7
arahy.Tifrunner.gnm1.ann1.TK2Q97 Arachis hypogaea HOM05D002493 ORTHO05D003175 8.3e-08 61.6 72 44.4
CDE02G4766 Ceratophyllum demersum HOM05D004055 ORTHO05D004795 8.3e-08 61.6 170 28.8
ECA248G0986 Erigeron canadensis HOM05D002493 ORTHO05D016993 8.3e-08 61.6 195 26.7
FAN06G0701 Fragaria x ananassa HOM05D002493 ORTHO05D003175 8.3e-08 61.6 148 31.8
arahy.Tifrunner.gnm1.ann1.SF5CY1 Arachis hypogaea HOM05D002493 ORTHO05D003175 1.1e-07 61.2 73 42.5
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 1.1e-07 61.2 53 52.8
CDE08G1219 Ceratophyllum demersum HOM05D004055 ORTHO05D004795 1.1e-07 61.2 170 29.4
FAN06G0974 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.1e-07 61.2 148 31.8
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 1.1e-07 61.2 72 43.1
Cpa.g.sc92.76 Carica papaya HOM05D002493 ORTHO05D003175 1.4e-07 60.8 82 40.2
DCAR_013651 Daucus carota HOM05D002493 ORTHO05D003175 1.4e-07 60.8 93 34.4
ECA248G1298 Erigeron canadensis HOM05D002493 ORTHO05D003175 1.4e-07 60.8 78 39.7
HanXRQChr10g0298511 Helianthus annuus HOM05D002493 ORTHO05D003175 1.4e-07 60.8 65 46.2
RcHm_v2.0_Chr1g0352691 Rosa chinensis HOM05D002493 ORTHO05D003175 1.4e-07 60.8 147 31.3
Duzib264G0984 Durio zibethinus HOM05D004055 ORTHO05D004795 1.8e-07 60.5 156 27.6
Gohir.D04G014600 Gossypium hirsutum HOM05D004055 ORTHO05D004795 1.8e-07 60.5 170 27.1
Gohir.D06G185400 Gossypium hirsutum HOM05D004055 ORTHO05D004795 1.8e-07 60.5 168 28.6
Gorai.012G017100 Gossypium raimondii HOM05D004055 ORTHO05D004795 1.8e-07 60.5 170 27.1
PGR119G1730 Punica granatum HOM05D004055 ORTHO05D004795 1.8e-07 60.5 174 29.3
unitig_0.g601 Utricularia gibba HOM05D000012 ORTHO05D001936 1.8e-07 60.5 75 40.0
Ciclev10011717m.g Citrus clementina HOM05D002493 ORTHO05D003175 2.4e-07 60.1 72 43.1
Duzib128G0587 Durio zibethinus HOM05D002493 ORTHO05D003175 2.4e-07 60.1 72 43.1
Eucgr.I00261 Eucalyptus grandis HOM05D004055 ORTHO05D004795 2.4e-07 60.1 171 31.0
Lalb_Chr22g0357761 Lupinus albus HOM05D002493 ORTHO05D003175 2.4e-07 60.1 148 31.1
Dinv08254 Davidia involucrata HOM05D002493 ORTHO05D003175 3.1e-07 59.7 72 44.4
Glyma.19G127800 Glycine max HOM05D002493 ORTHO05D003175 3.1e-07 59.7 72 41.7
Gohir.A11G306400 Gossypium hirsutum HOM05D002493 ORTHO05D003175 3.1e-07 59.7 105 36.2
HanXRQChr01g0007661 Helianthus annuus HOM05D002493 ORTHO05D003175 3.1e-07 59.7 232 27.6
Potri.006G035500 Populus trichocarpa HOM05D002493 ORTHO05D003175 3.1e-07 59.7 75 41.3
Cpa.g.sc72.32 Carica papaya HOM05D004055 ORTHO05D004795 4.1e-07 59.3 173 26.6
Gohir.A06G175700 Gossypium hirsutum HOM05D004055 ORTHO05D004795 4.1e-07 59.3 168 28.6
Gorai.010G216800 Gossypium raimondii HOM05D004055 ORTHO05D004795 4.1e-07 59.3 168 28.6
HanXRQChr02g0052411 Helianthus annuus HOM05D002493 ORTHO05D022825 4.1e-07 59.3 193 26.4
SGA_v2.0_scaffold2G01257 Striga asiatica HOM05D004055 ORTHO05D004795 4.1e-07 59.3 144 30.6
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 5.4e-07 58.9 89 34.8
Actinidia38179 Actinidia chinensis HOM05D002493 ORTHO05D003175 7.0e-07 58.5 82 37.8
COL.COLO4_21459 Corchorus olitorius HOM05D004055 ORTHO05D004795 7.0e-07 58.5 170 28.2
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla HOM05D002493 ORTHO05D003175 7.0e-07 58.5 84 38.1
Lalb_Chr24g0400441 Lupinus albus HOM05D002493 ORTHO05D003175 7.0e-07 58.5 77 37.7
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 7.0e-07 58.5 76 42.1
TAR625G1530 Trochodendron aralioides HOM05D004055 ORTHO05D004795 7.0e-07 58.5 177 28.2
Cfa019980 Carpinus fangiana HOM05D002493 ORTHO05D003175 9.1e-07 58.2 73 42.5
Glyma.02G157800 Glycine max HOM05D002493 ORTHO05D003175 9.1e-07 58.2 77 40.3
Gohir.A05G401200 Gossypium hirsutum HOM05D004055 ORTHO05D004795 9.1e-07 58.2 170 26.5
Gohir.D11G321900 Gossypium hirsutum HOM05D002493 ORTHO05D003175 9.1e-07 58.2 82 41.5
Thecc.10G166300 Theobroma cacao HOM05D004055 ORTHO05D004795 9.1e-07 58.2 169 28.4
TWI31G0449 Tripterygium wilfordii HOM05D004055 ORTHO05D004795 9.1e-07 58.2 174 29.3
HPP92_004417 Vanilla planifolia HOM05D004055 ORTHO05D004795 9.1e-07 58.2 173 28.3
HPP92_025127 Vanilla planifolia HOM05D000001 ORTHO05D000003 9.1e-07 58.2 77 40.3
GSVIVG01025776001 Vitis vinifera HOM05D002493 ORTHO05D003175 9.1e-07 58.2 78 41.0
DCAR_001415 Daucus carota HOM05D004055 ORTHO05D004795 1.2e-06 57.8 182 29.7
HanXRQChr02g0052401 Helianthus annuus HOM05D002493 ORTHO05D022825 1.2e-06 57.8 178 29.2
Lalb_Chr14g0365651 Lupinus albus HOM05D002493 ORTHO05D003175 1.2e-06 57.8 84 38.1
Nn7g36909 Nelumbo nucifera HOM05D002493 ORTHO05D003175 1.2e-06 57.8 71 45.1
Sabra06G0023800 Salix brachista HOM05D002493 ORTHO05D003175 1.2e-06 57.8 72 40.3
Aqoxy1G00414 Aquilegia oxysepala HOM05D002493 ORTHO05D003175 1.6e-06 57.4 74 44.6
A03p04290 Brassica napus HOM05D004055 ORTHO05D004795 1.6e-06 57.4 174 27.0
C09p67670 Brassica napus HOM05D004055 ORTHO05D004795 1.6e-06 57.4 211 26.1
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 1.6e-06 57.4 70 40.0
Actinidia05482 Actinidia chinensis HOM05D002493 ORTHO05D003175 2.0e-06 57.0 82 37.8
arahy.Tifrunner.gnm1.ann1.4137UB Arachis hypogaea HOM05D002493 ORTHO05D003175 2.0e-06 57.0 236 27.1
C03p04740 Brassica napus HOM05D004055 ORTHO05D004795 2.0e-06 57.0 179 26.3
BolC3t13008H Brassica oleracea HOM05D004055 ORTHO05D004795 2.0e-06 57.0 179 26.3
HanXRQChr13g0406701 Helianthus annuus HOM05D002493 ORTHO05D003175 2.0e-06 57.0 230 26.1
Hund19081 Selenicereus undatus HOM05D002493 ORTHO05D003175 2.0e-06 57.0 72 43.1
SGA_v2.0_scaffold106G30532 Striga asiatica HOM05D002493 ORTHO05D003175 2.0e-06 57.0 112 32.1
Thecc.05G121400 Theobroma cacao HOM05D002493 ORTHO05D003175 2.0e-06 57.0 72 40.3
TWI79G0735 Tripterygium wilfordii HOM05D004055 ORTHO05D004795 2.0e-06 57.0 167 29.3
Zm00001eb329070 Zea mays HOM05D002493 ORTHO05D003175 2.0e-06 57.0 79 40.5
EL10Ac3g07266 Beta vulgaris HOM05D002493 ORTHO05D003175 2.7e-06 56.6 73 41.1
CDE08G0106 Ceratophyllum demersum HOM05D002493 ORTHO05D003175 2.7e-06 56.6 62 43.5
Thhalv10013510m.g Eutrema salsugineum HOM05D002493 ORTHO05D003175 2.7e-06 56.6 83 36.1
Lsat_1_v5_gn_8_117400 Lactuca sativa HOM05D002493 ORTHO05D016993 2.7e-06 56.6 152 32.2
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 2.7e-06 56.6 84 36.9
MBI17_g17030_MAGBIO Magnolia biondii HOM05D004055 ORTHO05D004795 2.7e-06 56.6 175 26.9
Sed0016858 Sechium edule HOM05D004055 ORTHO05D004795 2.7e-06 56.6 171 27.5
Solyc10g080930.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 2.7e-06 56.6 89 32.6
Sopen10g031440 Solanum pennellii HOM05D002493 ORTHO05D003175 2.7e-06 56.6 89 32.6
TAR636G0768 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.7e-06 56.6 98 34.7
Atru.chr1.1386 Acer truncatum HOM05D002493 ORTHO05D003175 3.5e-06 56.2 85 37.6
AT5G09850 Arabidopsis thaliana HOM05D004055 ORTHO05D004795 3.5e-06 56.2 165 27.9
Dinv41077 Davidia involucrata HOM05D004055 ORTHO05D004795 3.5e-06 56.2 155 29.0
HanXRQChr01g0005801 Helianthus annuus HOM05D002493 ORTHO05D022825 3.5e-06 56.2 193 26.4
Lalb_Chr11g0068211 Lupinus albus HOM05D004055 ORTHO05D004795 3.5e-06 56.2 175 26.9
GSVIVG01034541001 Vitis vinifera HOM05D004055 ORTHO05D004795 3.5e-06 56.2 174 31.0
CSS0019053 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 4.5e-06 55.8 84 36.9
COL.COLO4_08833 Corchorus olitorius HOM05D002493 ORTHO05D003175 4.5e-06 55.8 71 42.3
HanXRQChr02g0052391 Helianthus annuus HOM05D002493 ORTHO05D022825 4.5e-06 55.8 178 27.0
Lsat_1_v5_gn_4_139020 Lactuca sativa HOM05D004055 ORTHO05D004795 4.5e-06 55.8 178 27.5
MBI13_g36916_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 4.5e-06 55.8 76 38.2
Peaxi162Scf00003g05036 Petunia axillaris HOM05D002493 ORTHO05D003175 4.5e-06 55.8 80 36.2
Potri.016G033300 Populus trichocarpa HOM05D002493 ORTHO05D003175 4.5e-06 55.8 75 38.7
unitig_736.g22361 Utricularia gibba HOM05D004055 ORTHO05D004795 4.5e-06 55.8 174 27.6
VMungo0251G0876 Vigna mungo HOM05D004055 ORTHO05D004795 4.5e-06 55.8 167 25.7
Zm00001eb110330 Zea mays HOM05D002493 ORTHO05D003175 4.5e-06 55.8 72 38.9
arahy.Tifrunner.gnm1.ann1.ZA3CQ0 Arachis hypogaea HOM05D002493 ORTHO05D003175 5.9e-06 55.5 78 41.0
BcaB08g37176 Brassica carinata HOM05D004055 ORTHO05D004795 5.9e-06 55.5 196 26.5
A10p27610 Brassica napus HOM05D004055 ORTHO05D004795 5.9e-06 55.5 212 25.9
A10p31030 Brassica napus HOM05D002493 ORTHO05D003175 5.9e-06 55.5 101 32.7
BraA10t44812Z Brassica rapa HOM05D004055 ORTHO05D004795 5.9e-06 55.5 212 25.9
BraA10t45148Z Brassica rapa HOM05D002493 ORTHO05D003175 5.9e-06 55.5 101 32.7
CSS0002579 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 5.9e-06 55.5 74 39.2
CiPaw.09G049700 Carya illinoinensis HOM05D002493 ORTHO05D003175 5.9e-06 55.5 74 39.2
Ca_08373_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 5.9e-06 55.5 83 37.3
Lj1g0014460 Lotus japonicus HOM05D002493 ORTHO05D003175 5.9e-06 55.5 94 34.0
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 5.9e-06 55.5 72 43.1
Phvul.002G268700 Phaseolus vulgaris HOM05D004055 ORTHO05D004795 5.9e-06 55.5 158 27.8
Aqoxy6G00380 Aquilegia oxysepala HOM05D004055 ORTHO05D004795 7.7e-06 55.1 181 27.1
MSTRG.23289 Avicennia marina HOM05D004055 ORTHO05D004795 7.7e-06 55.1 177 28.8
EL10Ac6g15243 Beta vulgaris HOM05D004055 ORTHO05D004795 7.7e-06 55.1 176 27.3
CAN.G128.85 Capsicum annuum HOM05D002493 ORTHO05D003175 7.7e-06 55.1 82 36.6
Lalb_Chr02g0156621 Lupinus albus HOM05D002493 ORTHO05D003175 7.7e-06 55.1 73 42.5
Nitab4.5_0000812g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 7.7e-06 55.1 72 40.3
Nitab4.5_0002869g0070 Nicotiana tabacum HOM05D002493 ORTHO05D003175 7.7e-06 55.1 72 40.3
Os07g0642600 Oryza sativa ssp. japonica HOM05D002493 ORTHO05D003175 7.7e-06 55.1 77 37.7
Os11g0166800 Oryza sativa ssp. japonica HOM05D004055 ORTHO05D004795 7.7e-06 55.1 181 26.5
HPP92_006789 Vanilla planifolia HOM05D002493 ORTHO05D003175 7.7e-06 55.1 199 28.6


User provided reference genes

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