Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 3.2e-278 961.4 618 100.0
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 6.1e-152 542.0 582 67.7
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 2.5e-137 493.4 656 57.9
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.1e-116 424.9 780 43.8
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 3.2e-116 423.3 780 40.5
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 1.2e-115 421.4 417 58.3
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 4.7e-112 409.5 786 39.1
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 6.2e-112 409.1 864 38.3
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 3.4e-110 403.3 633 42.7
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 9.9e-110 401.7 415 55.7
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.3e-109 401.4 449 54.1
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 1.4e-108 397.9 770 40.8
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 5.4e-108 396.0 471 50.7
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 7.1e-108 395.6 853 37.9
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 7.1e-108 395.6 768 41.5
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 7.1e-108 395.6 443 53.5
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 2.1e-107 394.0 444 52.5
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 1.3e-106 391.3 419 54.2
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 5.1e-106 389.4 450 52.2
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 1.9e-105 387.5 720 45.8
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 1.9e-105 387.5 494 49.8
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 5.6e-105 386.0 436 54.1
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.8e-104 383.6 767 41.9
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 4.7e-104 382.9 502 47.4
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 1.1e-103 381.7 818 36.8
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.4e-103 381.3 443 52.8
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.4e-103 380.6 704 44.9
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 5.2e-103 379.4 799 38.4
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 8.9e-103 378.6 451 51.9
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 3.4e-102 376.7 452 51.1
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 3.4e-102 376.7 714 41.6
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 5.8e-102 375.9 451 51.7
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 1.7e-101 374.4 720 45.7
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 2.2e-101 374.0 804 40.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.9e-101 373.6 756 38.4
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 4.9e-101 372.9 691 43.8
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 8.4e-101 372.1 422 53.3
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 2.4e-100 370.5 443 50.8
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.4e-100 370.5 761 38.5
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 2.7e-99 367.1 399 53.6
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 4.6e-99 366.3 656 45.4
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 4.6e-99 366.3 833 38.4
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 6.0e-99 365.9 777 37.7
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 7.8e-99 365.5 454 49.6
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 3.0e-98 363.6 858 37.5
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.5e-97 361.3 692 42.2
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 3.3e-97 360.1 361 56.5
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 5.6e-97 359.4 542 47.2
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 9.6e-97 358.6 691 42.5
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 1.2e-96 358.2 459 48.1
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 1.2e-96 358.2 677 41.2
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 2.1e-96 357.5 723 40.8
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 3.6e-96 356.7 632 40.0
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 2.4e-95 354.0 444 49.8
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 5.8e-94 349.4 411 51.6
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 2.2e-93 347.4 457 47.7
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 2.9e-93 347.1 422 50.7
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 1.1e-92 345.1 373 55.0
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 1.4e-92 344.7 443 47.6
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 2.4e-92 344.0 457 47.5
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 2.4e-92 344.0 449 46.8
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 3.2e-92 343.6 446 50.0
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 9.3e-92 342.0 623 42.2
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 1.0e-90 338.6 406 50.0
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 1.7e-90 337.8 792 38.6
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 3.9e-90 336.7 733 40.0
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 6.6e-90 335.9 442 49.1
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.1e-89 335.1 625 40.8
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.1e-89 335.1 723 39.4
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 3.3e-89 333.6 433 49.0
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 7.3e-89 332.4 429 47.8
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 9.6e-89 332.0 450 47.3
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 9.6e-89 332.0 680 45.0
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 1.3e-88 331.6 454 47.4
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.8e-87 327.8 418 49.3
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 2.4e-87 327.4 457 47.9
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 2.4e-87 327.4 418 46.4
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 1.5e-86 324.7 441 47.6
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 9.9e-86 322.0 421 48.7
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 2.7e-83 313.9 420 47.4
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 7.9e-83 312.4 352 52.8
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 3.9e-82 310.1 467 45.2
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 5.1e-82 309.7 435 46.7
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 9.6e-81 305.4 764 36.1
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 2.8e-80 303.9 372 50.5
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 4.0e-79 300.1 356 52.0
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 1.7e-77 294.7 357 51.0
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 2.5e-76 290.8 443 43.8
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 5.5e-76 289.7 355 50.7
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 5.3e-71 273.1 387 42.9
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.0e-70 271.2 366 47.0
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 4.2e-68 263.5 355 46.5
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 5.5e-68 263.1 381 44.1
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 7.1e-68 262.7 651 39.0
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 2.0e-62 244.6 414 42.3
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.4e-47 194.5 405 36.3
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.4e-47 194.5 405 36.3
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 4.5e-46 190.3 326 41.4
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 2.2e-45 188.0 507 39.4
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.2e-38 165.6 367 37.3
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 8.0e-35 152.9 146 56.8
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 1.4e-34 152.1 339 37.5
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 9.1e-31 139.4 368 35.9
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 2.3e-26 124.8 130 55.4
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 3.3e-20 104.4 244 34.0
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 1.8e-15 88.6 64 67.2
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 9.2e-15 86.3 126 44.4
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 1.1e-12 79.3 91 52.7
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 1.5e-12 79.0 171 36.8
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 1.5e-12 79.0 149 39.6
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 3.3e-12 77.8 149 38.3
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 3.4e-09 67.8 101 38.6
HanXRQChr16g0523381 Helianthus annuus HOM05D001236 ORTHO05D001090 5.8e-09 67.0 42 78.6
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 5.8e-09 67.0 56 64.3
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 9.8e-09 66.2 96 56.2
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 1.4e-07 62.4 85 58.8
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 4.1e-07 60.8 264 30.7
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 4.6e-06 57.4 62 56.5
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 6.0e-06 57.0 56 48.2


User provided reference genes

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