Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.5e-129 464.9 229 100.0
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 9.0e-125 450.3 229 96.5
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.1e-106 390.2 196 98.0
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-79 299.7 223 65.9
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-77 293.9 224 67.0
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 2.4e-77 292.7 224 64.3
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-77 292.7 224 66.1
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.3e-77 291.6 230 62.6
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.5e-76 288.9 224 66.5
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.5e-76 288.5 230 62.2
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.9e-76 288.1 230 62.2
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.9e-76 288.1 230 62.2
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.7e-76 287.7 223 63.2
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.0e-75 287.3 223 63.2
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 8.5e-75 284.3 224 64.3
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 1.1e-74 283.9 224 62.5
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-74 283.1 224 63.4
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-73 280.4 223 62.3
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-72 276.9 223 61.0
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-72 276.6 223 61.4
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-72 276.6 224 62.5
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-72 276.6 224 62.5
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-72 275.8 223 61.9
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 8.8e-72 274.2 223 61.4
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 2.0e-71 273.1 218 61.9
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-71 272.3 223 59.6
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.7e-71 271.6 200 70.5
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 7.4e-71 271.2 223 61.4
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 9.7e-71 270.8 205 67.3
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 1.7e-70 270.0 230 59.6
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 4.8e-70 268.5 223 61.9
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-69 265.8 209 63.6
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 7.0e-69 264.6 224 60.3
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.1e-69 264.2 204 67.6
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.5e-68 262.3 219 58.4
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.8e-67 258.8 224 54.5
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 8.5e-67 257.7 201 63.7
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-66 256.9 204 66.2
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 2.7e-65 252.7 213 56.3
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.7e-65 251.9 225 55.6
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 6.8e-64 248.1 228 54.4
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 8.8e-64 247.7 218 56.4
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 2.0e-63 246.5 225 55.6
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-63 246.1 228 53.9
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 3.4e-63 245.7 220 55.5
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 5.7e-63 245.0 224 56.7
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.5e-63 244.6 230 53.0
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 2.2e-62 243.0 217 56.2
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.7e-62 242.3 189 64.0
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 6.3e-62 241.5 210 59.0
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 8.3e-62 241.1 228 53.5
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 4.1e-61 238.8 216 55.1
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 2.7e-60 236.1 216 54.6
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.5e-60 235.7 196 61.2
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 4.5e-60 235.3 217 54.4
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-59 234.2 228 50.0
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-59 233.8 228 50.9
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-59 233.4 228 50.4
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-59 233.0 216 53.7
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 6.5e-59 231.5 222 52.7
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-58 229.2 210 54.8
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-58 228.8 210 54.3
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 2.1e-57 226.5 224 51.3
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-57 226.5 173 68.2
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-57 224.9 223 50.7
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-56 223.0 223 49.8
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-56 223.0 171 66.1
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-56 222.6 228 49.1
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.0e-56 222.6 175 66.9
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.8e-56 221.1 223 49.8
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-55 220.7 223 49.3
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-55 220.7 223 51.1
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.6e-55 219.5 179 63.1
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-55 218.8 223 49.8
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 4.4e-55 218.8 174 63.2
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-55 218.4 223 48.9
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.8e-55 217.6 223 48.9
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-54 217.2 223 48.9
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-54 217.2 228 46.9
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-54 216.9 223 48.9
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-53 213.8 223 46.6
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.1e-53 212.6 223 46.6
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.1e-53 212.2 217 47.0
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.4e-53 211.8 223 45.7
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.4e-53 211.8 223 46.2
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.0e-53 211.5 223 46.6
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 7.0e-53 211.5 223 47.5
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-52 210.7 180 60.6
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-52 210.3 223 46.2
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-52 209.9 223 45.3
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.5e-52 208.8 223 45.7
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-51 207.2 154 67.5
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 6.6e-51 204.9 223 46.6
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 6.6e-51 204.9 223 46.6
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 6.6e-51 204.9 161 63.4
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.6e-51 204.5 223 44.8
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-50 203.0 223 44.4
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-50 202.6 223 43.9
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 4.2e-50 202.2 220 50.9
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.2e-50 201.4 223 45.7
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.2e-50 201.4 223 44.4
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 9.5e-50 201.1 223 48.0
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-49 198.7 223 43.9
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-49 198.4 223 43.5
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.1e-49 198.4 187 57.2
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-49 198.4 223 45.7
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-49 198.0 223 43.5
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-48 197.2 223 45.3
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-48 197.2 223 43.9
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-48 196.8 196 52.0
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-48 195.7 200 51.5
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.2e-48 195.3 223 43.0
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-47 194.1 223 43.0
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-47 194.1 224 47.3
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-47 192.2 223 43.5
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 7.5e-47 191.4 166 57.8
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.8e-46 189.5 219 46.1
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-46 189.1 223 43.9
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.7e-46 189.1 224 46.0
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.3e-46 188.0 223 42.6
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-45 187.6 223 43.0
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-45 186.0 176 48.9
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-44 184.1 225 44.9
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-44 183.7 176 48.3
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-44 183.3 223 42.6
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 5.9e-44 181.8 130 70.0
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-43 181.0 223 42.6
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 1.0e-43 181.0 130 70.0
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-43 179.9 139 66.9
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-43 179.5 170 52.9
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.9e-43 179.1 144 62.5
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 2.3e-40 169.9 224 42.0
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-40 169.9 216 42.1
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-39 167.2 191 51.3
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.4e-39 166.0 161 49.1
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-35 154.1 115 69.6
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.9e-35 152.5 164 45.7
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.6e-35 151.8 136 55.9
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.3e-34 148.3 170 44.7
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.5e-34 147.9 143 51.0
TPR.G28675 Trifolium pratense HOM05D003057 ORTHO05D003904 1.6e-33 147.1 123 62.6
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-31 140.2 103 68.9
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 2.2e-30 136.7 115 60.9
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.9e-30 136.3 94 76.6
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-28 131.0 116 56.0
COL.COLO4_04492 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-27 127.1 104 57.7
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 3.0e-27 126.3 115 47.0
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 3.0e-27 126.3 115 47.0
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 3.0e-27 126.3 115 47.0
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 3.0e-27 126.3 102 60.8
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.9e-27 125.9 139 51.8
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.3e-26 121.7 180 40.0
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.6e-25 119.4 105 55.2
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 6.2e-25 118.6 223 35.0
COL.COLO4_35222 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.8e-24 115.2 193 35.8
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 8.9e-24 114.8 104 54.8
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-23 113.2 98 60.2
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.9e-22 109.0 78 66.7
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 1.6e-20 104.0 131 44.3
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.9e-19 99.4 203 35.0
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 1.9e-18 97.1 103 49.5
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-18 96.7 78 61.5
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 3.3e-18 96.3 101 48.5
ECA236G3949 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.2e-17 94.4 48 91.7
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 4.0e-16 89.4 116 41.4
MCO17G025 Micromonas commoda HOM05D003057 ORTHO05D003904 8.9e-16 88.2 198 32.8
TPR.G29392 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-15 87.8 77 57.1
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.9e-14 82.4 73 57.5
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-13 81.3 74 58.1
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.9e-13 80.5 170 35.9
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-10 70.9 49 69.4
Medtr7g060420 Medicago truncatula HOM05D000645 ORTHO05D000494 1.7e-06 57.4 72 48.6
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 1.7e-06 57.4 92 38.0


User provided reference genes

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