Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 2.0e-87 325.9 181 100.0
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 1.2e-63 246.9 185 76.2
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 1.8e-59 233.0 183 75.4
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 2.7e-47 192.6 183 67.8
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 1.3e-46 190.3 181 68.5
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.9e-46 189.1 180 64.4
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 6.6e-46 188.0 175 66.9
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 9.5e-45 184.1 172 64.0
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 1.6e-44 183.3 179 62.0
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 2.1e-44 183.0 184 64.7
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 2.8e-44 182.6 181 61.3
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 4.7e-44 181.8 176 61.9
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 8.0e-44 181.0 183 59.0
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 1.0e-43 180.6 168 67.3
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 1.0e-43 180.6 185 61.6
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 1.0e-43 180.6 184 59.8
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 1.4e-43 180.3 178 64.0
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 1.4e-43 180.3 176 61.9
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 1.4e-43 180.3 176 61.9
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 5.2e-43 178.3 180 61.7
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 5.2e-43 178.3 195 62.1
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 8.9e-43 177.6 179 60.3
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 8.9e-43 177.6 177 62.1
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 1.2e-42 177.2 184 60.3
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.5e-42 176.8 180 62.8
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 1.5e-42 176.8 174 62.6
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 2.0e-42 176.4 180 61.1
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.0e-42 176.4 175 60.6
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 2.0e-42 176.4 175 64.0
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 2.6e-42 176.0 184 60.3
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 2.6e-42 176.0 180 62.8
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 3.4e-42 175.6 177 60.5
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 4.4e-42 175.3 179 60.9
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 9.8e-42 174.1 180 60.6
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 9.8e-42 174.1 180 60.6
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 9.8e-42 174.1 175 60.6
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 1.3e-41 173.7 169 62.1
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 1.3e-41 173.7 175 62.9
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 1.7e-41 173.3 170 60.6
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.7e-41 173.3 174 62.6
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.7e-41 173.3 180 60.0
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 3.7e-41 172.2 177 57.6
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 3.7e-41 172.2 184 61.4
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 4.9e-41 171.8 180 59.4
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 4.9e-41 171.8 176 59.7
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 4.9e-41 171.8 177 59.3
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 6.3e-41 171.4 182 59.9
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 8.3e-41 171.0 173 60.1
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 8.3e-41 171.0 173 60.1
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 8.3e-41 171.0 154 66.9
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 1.1e-40 170.6 168 64.9
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.1e-40 170.6 162 64.2
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 1.4e-40 170.2 118 77.1
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 1.8e-40 169.9 185 56.8
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 1.8e-40 169.9 174 60.9
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 2.4e-40 169.5 174 61.5
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 2.4e-40 169.5 192 60.4
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 3.1e-40 169.1 183 57.9
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 3.1e-40 169.1 185 58.9
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 5.4e-40 168.3 177 58.8
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 7.0e-40 167.9 173 59.0
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 9.2e-40 167.5 183 59.0
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 9.2e-40 167.5 176 60.8
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 1.2e-39 167.2 187 55.6
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.2e-39 167.2 180 58.9
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.6e-39 166.8 184 59.2
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 2.0e-39 166.4 177 58.8
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 2.0e-39 166.4 173 59.5
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 3.5e-39 165.6 188 57.4
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 5.9e-39 164.9 123 73.2
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 7.8e-39 164.5 186 57.5
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 7.8e-39 164.5 155 63.2
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 1.0e-38 164.1 183 57.9
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 1.0e-38 164.1 183 57.9
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 1.3e-38 163.7 186 58.1
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 1.7e-38 163.3 124 71.0
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 1.7e-38 163.3 124 71.0
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 1.7e-38 163.3 183 56.3
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 2.9e-38 162.5 186 56.5
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 2.9e-38 162.5 119 70.6
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 3.9e-38 162.2 180 55.6
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 3.9e-38 162.2 124 70.2
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 3.9e-38 162.2 178 57.3
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 6.6e-38 161.4 181 56.4
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 6.6e-38 161.4 191 56.5
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 8.6e-38 161.0 169 58.6
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 1.9e-37 159.8 184 57.1
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 2.5e-37 159.5 191 54.5
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 2.5e-37 159.5 191 54.5
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 2.5e-37 159.5 180 56.1
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 2.5e-37 159.5 193 54.4
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 2.5e-37 159.5 183 56.3
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.6e-36 156.8 180 56.1
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 2.1e-36 156.4 170 58.2
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 3.6e-36 155.6 190 52.6
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 4.7e-36 155.2 109 78.0
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 4.7e-36 155.2 117 69.2
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 6.1e-36 154.8 181 53.6
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 1.0e-35 154.1 192 51.6
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 1.8e-35 153.3 181 53.0
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 3.1e-35 152.5 183 54.6
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 6.8e-35 151.4 178 54.5
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.5e-34 150.2 194 50.5
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 1.7e-33 146.7 175 54.3
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.9e-33 146.0 223 47.1
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 8.3e-33 144.4 181 54.1
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 3.2e-32 142.5 110 69.1
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 1.0e-30 137.5 177 50.8
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 1.5e-29 133.7 110 64.5
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 1.5e-29 133.7 185 49.7
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 2.5e-29 132.9 112 63.4
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 5.2e-27 125.2 194 43.3
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.6e-26 122.9 271 38.4
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 5.4e-24 115.2 80 72.5
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.2e-23 114.0 108 57.4
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 3.9e-22 109.0 107 57.0
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 5.1e-22 108.6 108 55.6
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 4.3e-21 105.5 79 64.6
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 7.3e-21 104.8 342 32.5
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 8.9e-19 97.8 182 39.6
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 1.3e-17 94.0 139 51.8
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 6.0e-15 85.1 83 56.6
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 2.3e-14 83.2 143 43.4
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 2.1e-12 76.6 81 54.3
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 5.8e-10 68.6 115 48.7
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 7.6e-10 68.2 61 63.9
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 6.4e-09 65.1 100 50.0
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 8.4e-09 64.7 106 51.9


User provided reference genes

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