Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 4.8e-141 504.6 274 100.0
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 9.1e-100 367.5 278 73.7
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.0e-95 354.0 273 74.4
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 3.2e-68 262.7 251 61.8
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 1.0e-66 257.7 241 64.7
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 4.3e-65 252.3 264 60.2
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.2e-64 250.8 269 56.5
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.6e-64 250.4 231 64.9
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 2.4e-63 246.5 244 63.5
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.1e-63 246.1 266 58.6
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 3.1e-63 246.1 232 64.2
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 6.8e-63 245.0 232 64.2
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.2e-62 244.2 249 63.5
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 2.6e-62 243.0 253 60.9
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.7e-61 240.4 253 61.7
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 6.4e-61 238.4 242 60.7
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 8.4e-61 238.0 243 64.6
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.1e-60 237.7 251 59.4
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 2.4e-60 236.5 243 62.6
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.2e-59 234.2 258 59.3
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 2.1e-59 233.4 248 61.7
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 3.5e-59 232.6 258 59.3
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 4.6e-59 232.3 246 60.2
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 4.6e-59 232.3 232 59.1
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 6.0e-59 231.9 258 58.9
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 6.0e-59 231.9 251 60.2
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 2.3e-58 229.9 255 57.3
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.9e-58 229.2 260 58.8
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 5.1e-58 228.8 236 61.0
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 6.6e-58 228.4 269 58.0
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 8.6e-58 228.0 241 58.9
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 5.6e-57 225.3 233 61.8
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 7.3e-57 224.9 244 56.1
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 1.2e-56 224.2 247 61.1
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 8.1e-56 221.5 252 57.9
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.8e-55 220.3 252 57.9
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 4.0e-55 219.2 276 54.0
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 6.9e-55 218.4 281 51.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 6.9e-55 218.4 221 62.0
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 1.2e-54 217.6 235 57.0
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 1.5e-54 217.2 260 54.6
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.0e-54 216.9 244 58.2
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 3.4e-54 216.1 229 57.6
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 5.8e-54 215.3 230 57.8
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 5.8e-54 215.3 231 53.7
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 7.6e-54 214.9 243 57.2
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 1.7e-53 213.8 274 52.6
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.2e-53 213.4 253 53.8
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 3.8e-53 212.6 261 53.6
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 8.4e-53 211.5 253 54.5
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 1.1e-52 211.1 227 56.4
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.4e-52 210.7 250 53.6
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 1.4e-52 210.7 231 56.3
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.4e-52 209.9 225 58.7
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 3.2e-52 209.5 250 53.6
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.2e-52 209.1 236 55.1
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 4.2e-52 209.1 260 53.8
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 5.4e-52 208.8 228 56.6
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 9.3e-52 208.0 252 52.8
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 9.3e-52 208.0 228 56.6
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.2e-51 207.6 253 54.5
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.6e-51 207.2 233 56.7
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 2.3e-50 203.4 233 57.9
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 5.1e-50 202.2 232 54.7
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.6e-50 201.8 232 53.9
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 8.7e-50 201.4 241 55.2
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 1.9e-49 200.3 231 57.6
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 4.3e-49 199.1 231 56.7
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 4.3e-49 199.1 234 52.6
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 5.6e-49 198.7 248 52.8
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 5.6e-49 198.7 193 64.8
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.6e-48 197.2 250 51.2
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 2.1e-48 196.8 228 51.3
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 2.1e-48 196.8 227 54.6
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 4.8e-48 195.7 210 58.1
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 8.1e-48 194.9 262 50.0
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.8e-47 193.7 250 49.6
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 4.0e-47 192.6 281 50.2
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 2.0e-46 190.3 244 48.4
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 2.0e-46 190.3 225 53.8
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 2.6e-46 189.9 241 49.0
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 5.8e-46 188.7 232 50.4
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 5.8e-46 188.7 236 49.6
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 5.8e-46 188.7 236 49.6
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 7.6e-46 188.3 248 48.8
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 7.6e-46 188.3 248 48.8
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 7.6e-46 188.3 229 50.2
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.3e-45 187.6 229 52.0
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 1.7e-45 187.2 257 49.8
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 2.2e-45 186.8 245 49.0
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 4.9e-45 185.7 240 48.3
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 4.9e-45 185.7 228 50.9
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.4e-44 184.1 236 49.2
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 1.9e-44 183.7 251 48.2
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.9e-44 183.7 227 49.3
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.4e-44 183.3 252 46.8
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.4e-44 183.3 252 46.8
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 4.2e-44 182.6 255 49.4
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 2.1e-43 180.3 232 48.7
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 3.5e-43 179.5 226 48.2
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 7.9e-43 178.3 160 67.5
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 2.3e-42 176.8 236 48.7
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 3.0e-42 176.4 236 48.7
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 3.0e-42 176.4 262 43.9
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 6.2e-40 168.7 243 48.1
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 3.1e-39 166.4 231 44.2
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 5.8e-38 162.2 251 45.4
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 7.6e-38 161.8 243 46.9
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 9.9e-38 161.4 273 43.2
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 4.2e-36 156.0 260 44.2
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 7.1e-36 155.2 233 44.2
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 9.3e-36 154.8 123 69.9
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 3.1e-31 139.8 272 37.9
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 2.9e-29 133.3 169 51.5
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 9.3e-28 128.3 120 62.5
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 1.8e-26 124.0 134 57.5
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 6.7e-26 122.1 251 35.5
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 5.7e-25 119.0 232 39.7
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 1.2e-22 111.3 150 50.0
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 1.0e-21 108.2 259 33.2
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 2.5e-20 103.6 227 36.1
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 1.4e-12 77.8 202 34.7
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 6.1e-11 72.4 176 38.1
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 7.9e-11 72.0 233 30.0
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 5.9e-06 55.8 55 50.9


User provided reference genes

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