Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 1.3e-115 419.9 235 100.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.8e-49 199.5 125 81.6
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.7e-41 173.7 103 78.6
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 8.2e-41 171.4 103 78.6
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 4.5e-39 165.6 105 71.4
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 5.9e-39 165.2 110 72.7
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.7e-38 163.7 102 72.5
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.2e-38 163.3 106 70.8
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.2e-38 163.3 126 61.9
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.0e-38 162.2 102 71.6
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 6.5e-38 161.8 101 72.3
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 6.5e-38 161.8 104 73.1
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 8.5e-38 161.4 102 73.5
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 8.5e-38 161.4 104 71.2
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.1e-37 161.0 124 63.7
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.5e-37 160.6 106 71.7
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 2.5e-37 159.8 122 62.3
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 2.5e-37 159.8 122 62.3
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 3.2e-37 159.5 102 70.6
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 3.2e-37 159.5 104 71.2
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 3.2e-37 159.5 100 71.0
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 4.2e-37 159.1 104 71.2
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 4.2e-37 159.1 104 69.2
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 4.2e-37 159.1 104 69.2
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 5.5e-37 158.7 104 69.2
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 5.5e-37 158.7 102 72.5
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 7.2e-37 158.3 124 62.1
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 7.2e-37 158.3 101 70.3
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 7.2e-37 158.3 100 72.0
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 9.4e-37 157.9 104 68.3
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 9.4e-37 157.9 104 68.3
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 9.4e-37 157.9 102 70.6
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.2e-36 157.5 103 69.9
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.2e-36 157.5 100 72.0
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.2e-36 157.5 106 69.8
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.6e-36 157.1 100 71.0
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 2.1e-36 156.8 104 69.2
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.6e-36 156.0 101 71.3
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 3.6e-36 156.0 134 59.0
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 4.7e-36 155.6 103 69.9
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 4.7e-36 155.6 100 72.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 4.7e-36 155.6 100 70.0
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 8.0e-36 154.8 100 72.0
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 8.0e-36 154.8 100 72.0
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 8.0e-36 154.8 124 60.5
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.0e-35 154.5 101 70.3
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.0e-35 154.5 122 60.7
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.0e-35 154.5 102 69.6
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.4e-35 154.1 126 61.1
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.4e-35 154.1 101 69.3
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 1.8e-35 153.7 123 61.0
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 2.3e-35 153.3 100 70.0
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 3.0e-35 152.9 102 67.6
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 8.8e-35 151.4 101 69.3
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 8.8e-35 151.4 102 69.6
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.2e-34 151.0 123 59.3
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.5e-34 150.6 124 58.9
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 2.0e-34 150.2 101 66.3
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 3.4e-34 149.4 123 57.7
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 7.5e-34 148.3 102 65.7
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 7.5e-34 148.3 100 67.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.3e-33 147.5 124 58.1
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.2e-33 146.7 126 56.3
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.8e-33 146.4 126 55.6
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.8e-33 146.4 126 55.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.4e-32 144.1 102 62.7
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.8e-32 143.7 156 49.4
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 5.4e-32 142.1 102 62.7
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.7e-31 139.8 102 61.8
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 5.9e-31 138.7 116 57.8
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.9e-30 136.3 91 69.2
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 3.8e-30 136.0 100 60.0
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 4.2e-29 132.5 119 55.5
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 9.5e-29 131.3 169 43.2
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 2.7e-28 129.8 101 60.4
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 5.2e-27 125.6 105 60.0
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.7e-23 113.2 101 55.4
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.3e-22 110.9 114 47.4
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.5e-21 107.5 64 71.9
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.9e-21 107.1 101 50.5
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 8.0e-20 101.7 65 69.2
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 9.8e-18 94.7 64 64.1
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.9e-17 93.2 54 75.9
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.7e-14 84.0 90 47.8
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.7e-14 84.0 108 43.5
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.9e-13 80.5 102 42.2
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 3.3e-13 79.7 87 46.0
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 2.1e-12 77.0 103 40.8
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.3e-11 73.6 99 39.4
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 2.6e-10 70.1 103 38.8
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 1.3e-09 67.8 58 56.9
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 3.7e-09 66.2 75 45.3
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 3.5e-07 59.7 59 47.5
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 6.0e-07 58.9 77 37.7
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.7e-06 57.4 111 32.4
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 5.0e-06 55.8 42 57.1
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 8.6e-06 55.1 39 59.0


User provided reference genes

Program Settings