Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 6.3e-202 707.2 354 100.0
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.3e-167 593.2 352 84.1
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 2.4e-161 572.4 335 83.3
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 2.2e-146 522.7 362 72.1
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.2e-146 522.7 363 71.6
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.9e-145 519.6 363 70.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 7.1e-145 517.7 365 69.6
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.2e-144 516.9 353 71.7
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.5e-144 515.4 355 70.1
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 7.8e-144 514.2 363 69.4
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.3e-143 513.5 362 70.2
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.7e-143 513.1 363 69.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 3.9e-143 511.9 360 69.7
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.5e-142 509.2 366 68.6
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 2.5e-142 509.2 353 71.1
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.5e-142 509.2 352 71.3
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 5.6e-142 508.1 353 71.7
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.2e-141 506.9 357 70.6
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.6e-141 506.5 367 68.7
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.6e-141 506.5 361 68.7
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.1e-141 506.1 362 69.3
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 2.8e-141 505.8 367 68.1
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 3.6e-141 505.4 353 71.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 8.1e-141 504.2 361 69.0
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.4e-140 503.4 365 67.9
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 4.0e-140 501.9 360 69.2
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 6.8e-140 501.1 359 67.7
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.2e-139 500.4 381 66.4
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 2.6e-139 499.2 362 68.0
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.3e-138 496.9 363 66.9
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.9e-138 495.7 363 66.7
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 8.4e-138 494.2 362 68.5
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.1e-137 493.8 360 67.5
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-137 493.0 364 68.1
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-137 493.0 364 68.1
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.9e-137 493.0 365 67.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.4e-137 492.7 359 66.9
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 5.4e-137 491.5 359 66.3
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 9.2e-137 490.7 364 67.3
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.2e-136 490.3 380 65.8
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.6e-136 490.0 367 67.3
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.6e-136 490.0 367 67.3
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 2.7e-136 489.2 368 66.3
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.7e-136 489.2 364 67.6
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.5e-136 488.8 363 65.3
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 7.8e-136 487.6 361 67.9
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.3e-135 486.9 361 66.2
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 2.3e-135 486.1 362 65.2
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.3e-135 486.1 356 67.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 3.9e-135 485.3 352 68.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.9e-135 485.3 365 67.1
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 8.7e-135 484.2 352 68.8
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 8.7e-135 484.2 358 68.4
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.3e-134 481.1 348 68.7
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.6e-133 478.8 362 68.2
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 6.2e-133 478.0 357 65.8
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 2.4e-132 476.1 357 65.5
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 4.0e-132 475.3 352 66.8
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 9.0e-132 474.2 352 67.6
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 9.0e-132 474.2 362 66.0
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.2e-131 473.8 352 66.8
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.2e-131 473.8 358 65.9
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.2e-131 473.8 373 63.8
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 2.6e-131 472.6 352 67.6
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 5.8e-131 471.5 349 65.0
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 7.6e-131 471.1 366 65.8
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.6e-131 471.1 354 65.8
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.3e-130 470.3 324 71.6
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.7e-130 469.9 365 66.0
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.2e-130 469.5 352 66.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 2.9e-130 469.2 352 66.2
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 2.9e-130 469.2 353 66.6
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 6.4e-130 468.0 356 67.7
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 8.4e-130 467.6 352 66.5
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.9e-129 466.5 361 65.9
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 6.0e-128 461.5 339 68.4
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.0e-127 460.7 330 69.7
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 3.9e-127 458.8 362 65.2
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 3.9e-127 458.8 361 64.3
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 6.6e-127 458.0 365 64.4
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 3.3e-126 455.7 359 64.3
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 4.3e-126 455.3 364 62.4
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.1e-125 453.0 362 62.7
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 4.8e-125 451.8 352 63.6
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 8.1e-125 451.1 359 62.1
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.1e-124 450.7 356 62.1
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 3.1e-124 449.1 360 63.6
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 5.3e-124 448.4 361 61.8
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 9.0e-124 447.6 431 54.8
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.4e-123 445.7 356 60.4
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.4e-123 445.7 361 60.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 3.4e-123 445.7 358 61.2
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 8.4e-122 441.0 318 68.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.2e-121 439.1 426 55.9
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 4.2e-121 438.7 317 68.1
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.2e-121 438.7 407 57.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.0e-119 434.1 339 64.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 5.1e-119 431.8 336 64.0
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 4.5e-115 418.7 313 66.8
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 6.0e-112 408.3 289 69.6
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.1e-109 399.8 289 67.5
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.4e-108 397.1 291 67.4
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 7.6e-107 391.3 314 62.1
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 4.9e-106 388.7 340 57.4
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 4.6e-104 382.1 342 54.7
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 6.0e-104 381.7 275 69.5
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 5.1e-103 378.6 275 68.7
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 5.1e-103 378.6 361 54.3
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 7.6e-99 364.8 302 64.6
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.4e-92 343.2 329 56.5
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 5.3e-92 342.0 259 67.2
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 4.5e-91 339.0 266 63.9
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 7.7e-91 338.2 257 65.0
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.3e-90 337.4 344 50.9
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.5e-83 313.9 301 51.8
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 8.5e-74 281.6 452 37.6
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-62 243.8 357 43.1
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 1.3e-58 231.1 343 39.9
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.6e-54 216.9 350 38.0
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 2.3e-47 193.7 177 61.0
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-46 191.4 246 48.8
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.8e-43 178.7 240 47.9
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-41 174.1 210 51.0
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-38 162.9 180 53.3
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.7e-37 159.8 180 53.3
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.9e-36 157.5 244 44.7
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.3e-34 151.4 113 62.8
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 4.4e-22 109.8 125 48.0
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 4.9e-21 106.3 193 37.8
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 4.4e-14 83.2 69 55.1
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.3e-13 81.6 69 53.6
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 1.9e-12 77.8 49 69.4
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 6.6e-10 69.3 225 27.1
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.6e-08 64.7 83 44.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.5e-06 58.2 35 74.3


User provided reference genes

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