Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.0e-105 386.7 197 100.0
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 3.6e-90 335.1 195 83.6
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 3.9e-84 315.1 199 79.9
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.7e-76 289.7 176 80.1
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 1.1e-73 280.4 171 81.3
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.1e-73 280.4 175 80.0
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 1.8e-73 279.6 186 74.7
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 5.2e-73 278.1 182 74.7
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.2e-73 278.1 182 74.7
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.8e-73 277.7 182 74.7
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 8.9e-73 277.3 182 72.0
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.9e-73 277.3 182 74.7
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.2e-72 276.9 191 71.7
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.2e-72 276.9 183 74.9
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.2e-72 276.9 182 74.2
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 2.0e-72 276.2 182 74.7
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.0e-72 276.2 182 73.1
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.4e-72 275.4 182 74.2
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 4.4e-72 275.0 187 71.7
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.4e-72 275.0 182 73.1
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 5.8e-72 274.6 188 69.7
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 7.6e-72 274.2 175 74.9
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 7.6e-72 274.2 198 69.2
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 7.6e-72 274.2 176 76.1
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 9.9e-72 273.9 187 71.1
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.3e-71 273.5 182 73.1
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.3e-71 273.5 182 74.7
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.7e-71 273.1 176 76.7
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.2e-71 272.7 184 73.9
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.2e-71 272.7 182 72.0
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.9e-71 272.3 176 75.0
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 3.8e-71 271.9 188 70.7
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 8.4e-71 270.8 182 70.9
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 8.4e-71 270.8 187 70.1
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.1e-70 270.4 198 69.2
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.4e-70 270.0 187 72.7
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.9e-70 269.6 182 72.0
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.4e-70 269.2 182 72.0
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 3.2e-70 268.9 182 72.0
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 4.2e-70 268.5 191 71.2
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 4.2e-70 268.5 182 71.4
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 7.1e-70 267.7 175 74.9
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 7.1e-70 267.7 182 68.7
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.2e-69 266.9 175 74.3
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 1.2e-69 266.9 175 72.6
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.6e-69 266.5 176 73.9
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.6e-69 266.5 179 70.9
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.1e-69 266.2 175 73.7
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.0e-68 263.8 188 70.2
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.7e-68 263.1 187 71.7
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 3.9e-68 261.9 175 71.4
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 3.9e-68 261.9 190 66.8
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 5.1e-68 261.5 188 68.1
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 6.6e-68 261.2 177 71.8
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 8.7e-68 260.8 179 70.4
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 8.7e-68 260.8 176 72.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 8.7e-68 260.8 174 73.0
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.1e-67 260.4 192 70.3
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.1e-67 260.4 216 63.0
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.5e-67 260.0 175 70.9
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.5e-67 260.0 179 71.5
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.5e-67 259.2 190 67.9
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.6e-66 256.5 175 71.4
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.1e-66 256.1 182 69.2
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.8e-66 255.8 177 68.9
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.1e-65 253.8 175 69.7
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.4e-65 253.4 183 66.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 5.3e-65 251.5 182 67.0
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 5.3e-65 251.5 179 68.7
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 9.0e-65 250.8 175 69.1
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.2e-64 250.4 175 68.6
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.0e-64 249.6 183 65.6
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 2.6e-64 249.2 175 68.6
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 3.4e-64 248.8 182 65.9
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 3.4e-64 248.8 178 67.4
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 4.4e-64 248.4 179 67.6
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.2e-63 246.1 188 63.8
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 3.8e-63 245.4 183 65.0
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 2.4e-62 242.7 182 65.9
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.3e-60 236.9 171 69.0
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.5e-59 233.4 171 67.8
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.4e-57 226.1 175 66.3
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.2e-56 223.8 187 59.9
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 3.8e-55 218.8 271 45.8
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 8.4e-55 217.6 185 64.9
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 5.1e-52 208.4 137 74.5
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 2.5e-51 206.1 168 63.1
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 4.3e-51 205.3 136 73.5
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 4.3e-51 205.3 175 61.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 6.2e-50 201.4 123 76.4
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.0e-47 194.1 194 56.2
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.3e-47 193.7 194 56.2
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 8.4e-47 191.0 124 74.2
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.7e-45 186.0 150 59.3
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.0e-44 184.1 128 68.0
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.7e-44 181.4 124 75.0
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 8.7e-44 181.0 187 52.4
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.5e-43 180.3 123 68.3
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.8e-42 175.3 113 77.0
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.8e-41 173.3 146 61.6
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 3.8e-39 165.6 152 56.6
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 2.5e-38 162.9 155 52.3
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 2.3e-36 156.4 110 72.7
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.4e-35 151.4 106 70.8
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.6e-34 150.2 158 46.8
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.8e-34 148.7 98 76.5
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 4.8e-34 148.7 123 61.8
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.7e-31 140.2 106 67.9
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 2.5e-30 136.3 100 66.0
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 7.4e-27 124.8 85 68.2
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.4e-25 120.6 168 43.5
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.4e-20 104.0 133 42.1
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 4.4e-19 99.0 71 67.6
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.1e-17 94.4 167 34.7
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.4e-12 77.4 53 67.9
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.1e-11 74.3 50 66.0
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 4.4e-11 72.4 55 58.2
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 1.6e-08 63.9 36 77.8
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.0e-08 63.5 112 38.4
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 3.5e-08 62.8 48 56.2
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 8.5e-07 58.2 43 60.5
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 3.2e-06 56.2 47 55.3


User provided reference genes

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