Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 9.4e-85 317.0 181 100.0
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.1e-72 276.9 180 78.9
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 6.7e-67 257.7 183 71.6
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 4.5e-63 245.0 181 68.0
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 6.5e-62 241.1 181 68.5
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.1e-61 240.4 178 69.1
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.5e-61 239.2 177 69.5
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 9.4e-61 237.3 178 66.3
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 1.0e-59 233.8 144 79.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 2.3e-59 232.6 144 78.5
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 2.3e-59 232.6 144 78.5
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.3e-59 232.6 177 64.4
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.3e-59 232.6 178 65.2
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 6.7e-59 231.1 177 66.7
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 6.7e-59 231.1 177 66.1
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 1.2e-58 230.3 179 64.8
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.5e-58 229.9 177 66.1
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 2.6e-58 229.2 177 65.5
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.6e-58 229.2 179 64.8
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 2.6e-58 229.2 144 78.5
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 3.3e-58 228.8 180 65.0
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 4.4e-58 228.4 144 77.8
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 9.7e-58 227.3 177 65.0
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.3e-57 226.9 178 66.3
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.3e-57 226.9 137 81.8
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 1.3e-57 226.9 183 63.9
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 2.2e-57 226.1 180 64.4
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 2.2e-57 226.1 177 65.0
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 6.3e-57 224.6 137 80.3
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 6.3e-57 224.6 178 64.6
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.4e-56 223.4 181 61.9
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 1.8e-56 223.0 176 64.2
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.8e-56 223.0 178 65.2
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.4e-56 222.6 178 65.2
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 2.4e-56 222.6 180 62.8
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 3.1e-56 222.2 179 62.6
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 3.1e-56 222.2 177 62.1
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 4.1e-56 221.9 179 60.9
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 4.1e-56 221.9 178 60.7
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 7.0e-56 221.1 133 79.7
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 9.1e-56 220.7 178 64.6
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 9.1e-56 220.7 183 63.4
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 9.1e-56 220.7 178 63.5
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.2e-55 220.3 178 65.7
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 2.0e-55 219.5 178 62.9
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 2.0e-55 219.5 132 81.1
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 4.5e-55 218.4 121 83.5
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 4.5e-55 218.4 178 64.0
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 7.7e-55 217.6 177 63.3
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 1.7e-54 216.5 127 78.0
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 6.5e-54 214.5 177 60.5
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 6.5e-54 214.5 141 74.5
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 8.5e-54 214.2 129 83.7
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.1e-53 213.8 179 61.5
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 1.9e-53 213.0 143 70.6
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 5.5e-53 211.5 180 62.2
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 7.2e-53 211.1 139 74.1
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 9.4e-53 210.7 182 61.5
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.2e-52 210.3 181 60.2
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 3.6e-52 208.8 178 61.8
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 3.6e-52 208.8 178 61.8
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 3.6e-52 208.8 137 73.7
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 8.0e-52 207.6 178 61.2
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 8.0e-52 207.6 178 61.2
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 1.0e-51 207.2 179 59.8
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 2.3e-51 206.1 140 68.6
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 3.0e-51 205.7 179 60.3
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 3.0e-51 205.7 179 60.3
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 3.0e-51 205.7 179 60.3
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 5.2e-51 204.9 179 59.2
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 8.8e-51 204.1 118 78.0
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 2.0e-50 203.0 184 57.6
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.6e-50 202.6 200 54.5
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 3.4e-50 202.2 118 80.5
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 4.4e-50 201.8 137 67.9
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 7.5e-50 201.1 141 68.1
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 7.5e-50 201.1 127 72.4
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 9.8e-50 200.7 121 77.7
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 1.3e-49 200.3 179 58.1
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 1.3e-49 200.3 179 58.1
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 1.3e-49 200.3 179 58.1
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 1.3e-49 200.3 179 58.1
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 1.7e-49 199.9 179 58.1
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 3.7e-49 198.7 141 68.1
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 3.7e-49 198.7 139 67.6
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 4.8e-49 198.4 142 66.9
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 6.3e-49 198.0 147 67.3
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 6.3e-49 198.0 141 66.7
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.4e-48 196.8 141 68.1
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 1.4e-48 196.8 119 76.5
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 2.4e-48 196.1 112 81.2
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 4.1e-48 195.3 119 76.5
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 2.0e-47 193.0 180 55.0
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 3.5e-47 192.2 117 74.4
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 3.6e-44 182.2 186 53.8
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 4.7e-44 181.8 116 69.8
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 6.1e-44 181.4 117 70.1
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 7.5e-42 174.5 108 75.0
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 4.1e-40 168.7 181 49.7
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 7.0e-40 167.9 126 63.5
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 9.2e-40 167.5 177 50.3
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 2.0e-39 166.4 141 61.0
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.9e-33 145.2 120 60.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.1e-32 144.1 106 67.0
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 1.1e-27 127.5 177 44.1
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 1.5e-26 123.6 106 61.3
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 1.4e-24 117.1 124 55.6
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.1e-23 113.2 58 86.2
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.7e-23 112.8 67 76.1
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 8.6e-22 107.8 78 73.1
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.6e-20 103.6 75 66.7
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 3.4e-18 95.9 64 71.9
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 4.0e-11 72.4 93 49.5


User provided reference genes

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