Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G6157 Erigeron canadensis HOM05D007686 ORTHO05D009709 2.0e-55 221.1 255 100.0
HanXRQChr08g0208401 Helianthus annuus HOM05D007686 ORTHO05D009709 7.9e-44 182.6 255 93.3
Dinv14741 Davidia involucrata HOM05D007686 ORTHO05D009709 4.1e-24 117.1 76 75.0
Gohir.D04G180200 Gossypium hirsutum HOM05D007686 ORTHO05D009709 5.4e-24 116.7 254 54.7
Gohir.A04G137000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 7.0e-24 116.3 254 62.6
Lsat_1_v5_gn_8_152860 Lactuca sativa HOM05D007686 ORTHO05D009709 1.2e-23 115.5 220 76.8
SGA_v2.0_scaffold100G29576 Striga asiatica HOM05D007686 ORTHO05D009709 1.2e-23 115.5 77 67.5
Manes.13G022000 Manihot esculenta HOM05D007686 ORTHO05D009709 2.7e-23 114.4 254 56.7
PGR119G1810 Punica granatum HOM05D007686 ORTHO05D009709 4.5e-23 113.6 255 78.4
Manes.13G021400 Manihot esculenta HOM05D007686 ORTHO05D009709 1.0e-22 112.5 254 55.1
TWI36G0128 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 1.7e-22 111.7 253 66.4
Eucgr.H02473 Eucalyptus grandis HOM05D007686 ORTHO05D009709 2.2e-22 111.3 253 77.9
TWI18G1075 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 2.9e-22 110.9 245 79.6
Migut.K00622 Erythranthe guttata HOM05D007686 ORTHO05D009709 3.8e-22 110.5 77 66.2
Thecc.02G263700 Theobroma cacao HOM05D007686 ORTHO05D009709 8.5e-22 109.4 254 77.6
FAN12G1967 Fragaria x ananassa HOM05D007686 ORTHO05D009709 5.5e-21 106.7 81 64.2
Ciclev10031251m.g Citrus clementina HOM05D007686 ORTHO05D009709 7.2e-21 106.3 76 67.1
CiPaw.05G168000 Carya illinoinensis HOM05D007686 ORTHO05D009709 2.1e-20 104.8 77 64.9
Potri.008G185000 Populus trichocarpa HOM05D007686 ORTHO05D009709 2.7e-20 104.4 253 52.6
Sabra08G0140000 Salix brachista HOM05D007686 ORTHO05D009709 2.7e-20 104.4 253 50.2
Prupe.1G242700 Prunus persica HOM05D007686 ORTHO05D009709 6.1e-20 103.2 78 67.9
RcHm_v2.0_Chr4g0432731 Rosa chinensis HOM05D007686 ORTHO05D009709 6.1e-20 103.2 77 66.2
Cpa.g.sc33.48 Carica papaya HOM05D007686 ORTHO05D009709 2.3e-19 101.3 76 63.2
CANSAT01G2773 Cannabis sativa HOM05D007686 ORTHO05D009709 4.0e-19 100.5 74 64.9
MD13G1103100 Malus domestica HOM05D007686 ORTHO05D009709 6.8e-19 99.8 68 73.5
DCAR_031167 Daucus carota HOM05D002540 ORTHO05D002672 8.8e-19 99.4 68 75.0
Rhsim12G0039200 Rhododendron simsii HOM05D007686 ORTHO05D009709 1.2e-18 99.0 59 79.7
Solyc06g008190.1 Solanum lycopersicum HOM05D007686 ORTHO05D009709 3.4e-18 97.4 65 72.3
Sopen06g003050 Solanum pennellii HOM05D007686 ORTHO05D009709 3.4e-18 97.4 65 72.3
CSS0050065 Camellia sinensis var. sinensis HOM05D007686 ORTHO05D009709 7.5e-18 96.3 58 79.3
Gorai.012G173300 Gossypium raimondii HOM05D007686 ORTHO05D009709 7.5e-18 96.3 254 77.2
Lalb_Chr07g0185471 Lupinus albus HOM05D007686 ORTHO05D009709 2.8e-17 94.4 78 60.3
Nitab4.5_0000067g0230 Nicotiana tabacum HOM05D007686 ORTHO05D009709 2.8e-17 94.4 63 69.8
arahy.Tifrunner.gnm1.ann1.BXJH78 Arachis hypogaea HOM05D007686 ORTHO05D009709 3.7e-17 94.0 78 57.7
Hma1.2p1_0815F.1_g222720 Hydrangea macrophylla HOM05D007686 ORTHO05D009709 6.3e-17 93.2 56 82.1
CDE05G1633 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 1.1e-16 92.4 72 61.1
Psat7g058760 Pisum sativum HOM05D007686 ORTHO05D009709 1.1e-16 92.4 78 57.7
MD16G1103300 Malus domestica HOM05D007686 ORTHO05D009709 1.8e-16 91.7 60 76.7
Medtr8g089700 Medicago truncatula HOM05D007686 ORTHO05D009709 1.8e-16 91.7 73 63.0
Nitab4.5_0001839g0010 Nicotiana tabacum HOM05D007686 ORTHO05D009709 2.4e-16 91.3 63 68.3
MSTRG.555 Avicennia marina HOM05D007686 ORTHO05D009709 4.1e-16 90.5 62 66.1
TPR.G6255 Trifolium pratense HOM05D007686 ORTHO05D009709 7.0e-16 89.7 78 59.0
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 9.1e-16 89.4 75 57.3
Glyma.05G173932 Glycine max HOM05D007686 ORTHO05D009709 1.2e-15 89.0 82 52.4
Glyma.08G131100 Glycine max HOM05D007686 ORTHO05D009709 2.7e-15 87.8 82 52.4
Sed0013465 Sechium edule HOM05D007686 ORTHO05D009709 3.5e-15 87.4 73 54.8
CsaV3_5G030960 Cucumis sativus L. HOM05D007686 ORTHO05D009709 4.5e-15 87.0 73 54.8
Phvul.002G258900 Phaseolus vulgaris HOM05D007686 ORTHO05D009709 4.5e-15 87.0 82 52.4
ClCG05G025900 Citrullus lanatus HOM05D007686 ORTHO05D009709 1.0e-14 85.9 76 52.6
Lj4g0016926 Lotus japonicus HOM05D007686 ORTHO05D009709 1.7e-14 85.1 72 59.7
Lj3P1060G37 Lonicera japonica HOM05D007686 ORTHO05D009709 2.3e-14 84.7 63 68.3
AUR62011787 Chenopodium quinoa HOM05D007686 ORTHO05D009709 3.8e-14 84.0 63 61.9
Ca_17785_v3 Cicer arietinum L. HOM05D007686 ORTHO05D009709 3.8e-14 84.0 73 57.5
GSVIVG01000559001 Vitis vinifera HOM05D007686 ORTHO05D009709 6.6e-14 83.2 60 70.0
SHI17831 Sapria himalayana HOM05D007686 ORTHO05D009709 1.1e-13 82.4 81 56.8
Sc06g0009620 Simmondsia chinensis HOM05D007686 ORTHO05D009709 5.5e-13 80.1 52 73.1
QL03p056833 Quercus lobata HOM05D007686 ORTHO05D009709 1.2e-12 79.0 55 70.9
QL93p1848_0021 Quercus lobata HOM05D007686 ORTHO05D009709 1.2e-12 79.0 55 70.9
Zm00001eb331140 Zea mays HOM05D007686 ORTHO05D009709 1.2e-12 79.0 72 51.4
EL10Ac7g16785 Beta vulgaris HOM05D007686 ORTHO05D009709 1.6e-12 78.6 57 64.9
COL.COLO4_23488 Corchorus olitorius HOM05D007686 ORTHO05D009709 1.6e-12 78.6 223 81.2
FvH4_4g25420 Fragaria vesca HOM05D007686 ORTHO05D009709 2.1e-12 78.2 47 74.5
Os07g0688100 Oryza sativa ssp. japonica HOM05D007686 ORTHO05D009709 3.0e-11 74.3 72 44.4
Atru.chr11.2166 Acer truncatum HOM05D007686 ORTHO05D009709 8.9e-11 72.8 49 71.4
PSO724G0460 Papaver somniferum HOM05D007686 ORTHO05D009709 1.2e-10 72.4 53 64.2
PSO135G0590 Papaver somniferum HOM05D007686 ORTHO05D009709 2.0e-10 71.6 52 65.4
Aqoxy2G03020 Aquilegia oxysepala HOM05D007686 ORTHO05D009709 2.6e-10 71.2 47 70.2
AT1G13040 Arabidopsis thaliana HOM05D007686 ORTHO05D009709 3.4e-10 70.9 49 69.4
AL1G24690 Arabidopsis lyrata HOM05D007686 ORTHO05D009709 5.7e-10 70.1 49 69.4
Gohir.D02G157000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 9.8e-10 69.3 54 61.1
THA.LOC104805275 Tarenaya hassleriana HOM05D007686 ORTHO05D009709 9.8e-10 69.3 45 71.1
TAR383G0079 Trochodendron aralioides HOM05D007686 ORTHO05D009709 1.7e-09 68.6 45 73.3
Aa31LG1G1760 Aethionema arabicum HOM05D007686 ORTHO05D009709 2.2e-09 68.2 252 72.6
Sp1g11590 Schrenkiella parvula HOM05D007686 ORTHO05D009709 2.2e-09 68.2 49 67.3
Carub.0001s1279 Capsella rubella HOM05D007686 ORTHO05D009709 2.9e-09 67.8 49 67.3
BcaC05g25091 Brassica carinata HOM05D007686 ORTHO05D009709 8.3e-09 66.2 47 66.0
A06p08670 Brassica napus HOM05D002540 ORTHO05D002672 8.3e-09 66.2 47 66.0
BolC5t29774H Brassica oleracea HOM05D007686 ORTHO05D009709 8.3e-09 66.2 47 66.0
BraA06t24064Z Brassica rapa HOM05D007686 ORTHO05D009709 8.3e-09 66.2 47 66.0
C05p10280 Brassica napus HOM05D002540 ORTHO05D002672 1.8e-08 65.1 47 63.8
CARHR013370 Cardamine hirsuta HOM05D007686 ORTHO05D009709 3.2e-08 64.3 47 68.1
Gorai.005G176400 Gossypium raimondii HOM05D007686 ORTHO05D009709 4.1e-08 63.9 42 64.3
C08p15790 Brassica napus HOM05D002540 ORTHO05D002672 1.2e-07 62.4 47 66.0
BolC8t49205H Brassica oleracea HOM05D002540 ORTHO05D002672 1.2e-07 62.4 47 66.0
Thhalv10007381m.g Eutrema salsugineum HOM05D007686 ORTHO05D009709 1.6e-07 62.0 47 63.8
A08p32500 Brassica napus HOM05D007686 ORTHO05D009709 2.0e-07 61.6 47 66.0
BraA08t35174Z Brassica rapa HOM05D007686 ORTHO05D009709 2.0e-07 61.6 47 66.0
PGSC0003DMG400014696 Solanum tuberosum HOM05D007686 ORTHO05D009709 3.5e-07 60.8 45 64.4
CAN.G941.2 Capsicum annuum HOM05D007686 ORTHO05D009709 1.0e-06 59.3 161 29.8
Oeu049173.1 Olea europaea HOM05D007686 ORTHO05D009709 1.0e-06 59.3 43 60.5
Gohir.A03G132900 Gossypium hirsutum HOM05D007686 ORTHO05D009709 1.3e-06 58.9 46 56.5
HPP92_012781 Vanilla planifolia HOM05D007686 ORTHO05D009709 6.6e-06 56.6 41 61.0


User provided reference genes

Program Settings