Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G6097 Erigeron canadensis HOM05D002486 ORTHO05D002606 1.4e-31 139.0 70 100.0
HanXRQChr13g0397721 Helianthus annuus HOM05D002486 ORTHO05D002606 3.7e-21 104.4 70 75.7
HanXRQChr02g0054231 Helianthus annuus HOM05D002486 ORTHO05D002606 4.8e-21 104.0 70 72.9
Lsat_1_v5_gn_6_37000 Lactuca sativa HOM05D002486 ORTHO05D002606 2.2e-18 95.1 70 70.0
Duzib128G1093 Durio zibethinus HOM05D002486 ORTHO05D002606 2.4e-12 75.1 69 50.7
Gohir.D11G269800 Gossypium hirsutum HOM05D002486 ORTHO05D002606 2.4e-12 75.1 69 46.4
Gohir.A11G259700 Gossypium hirsutum HOM05D002486 ORTHO05D002606 4.1e-12 74.3 69 46.4
Thecc.05G294700 Theobroma cacao HOM05D002486 ORTHO05D002606 4.1e-12 74.3 68 48.5
Gorai.007G289900 Gossypium raimondii HOM05D002486 ORTHO05D002606 5.3e-12 73.9 69 46.4
Duzib177G0910 Durio zibethinus HOM05D002486 ORTHO05D002606 1.6e-11 72.4 68 45.6
Duzib177G1131 Durio zibethinus HOM05D002486 ORTHO05D002606 1.6e-11 72.4 68 45.6
HanXRQChr14g0438171 Helianthus annuus HOM05D002486 ORTHO05D002606 4.5e-11 70.9 70 54.3
DCAR_017052 Daucus carota HOM05D002486 ORTHO05D002606 1.3e-10 69.3 70 47.1
Rhsim04G0087700 Rhododendron simsii HOM05D002486 ORTHO05D002606 2.9e-10 68.2 71 50.7
COL.COLO4_13595 Corchorus olitorius HOM05D002486 ORTHO05D002606 3.8e-10 67.8 70 45.7
Manes.09G141300 Manihot esculenta HOM05D002486 ORTHO05D002606 6.5e-10 67.0 70 50.0
Potri.019G035000 Populus trichocarpa HOM05D002486 ORTHO05D002606 6.5e-10 67.0 73 49.3
QL07p019482 Quercus lobata HOM05D002486 ORTHO05D002606 8.5e-10 66.6 69 49.3
GSVIVG01001063001 Vitis vinifera HOM05D002486 ORTHO05D002606 4.2e-09 64.3 71 43.7
Ciclev10022769m.g Citrus clementina HOM05D002486 ORTHO05D002606 5.5e-09 63.9 64 48.4
Gohir.A11G296400 Gossypium hirsutum HOM05D002486 ORTHO05D002606 5.5e-09 63.9 70 44.3
Glyma.16G153500 Glycine max HOM05D002486 ORTHO05D002606 7.2e-09 63.5 71 49.3
Oeu024504.1 Olea europaea HOM05D002486 ORTHO05D002606 7.2e-09 63.5 67 38.8
Phvul.004G080100 Phaseolus vulgaris HOM05D002486 ORTHO05D002606 7.2e-09 63.5 71 49.3
Atru.chr2.1382 Acer truncatum HOM05D002486 ORTHO05D002606 9.4e-09 63.2 62 46.8
Potri.013G058200 Populus trichocarpa HOM05D002486 ORTHO05D002606 9.4e-09 63.2 71 43.7
Glyma.02G072300 Glycine max HOM05D002486 ORTHO05D002606 1.2e-08 62.8 72 48.6
Gorai.007G343300 Gossypium raimondii HOM05D002486 ORTHO05D002606 2.1e-08 62.0 70 42.9
CSS0028749 Camellia sinensis var. sinensis HOM05D002486 ORTHO05D002606 2.7e-08 61.6 71 45.1
Medtr6g029390 Medicago truncatula HOM05D002486 ORTHO05D002606 2.7e-08 61.6 71 45.1
Psat1g092160 Pisum sativum HOM05D002486 ORTHO05D002606 3.6e-08 61.2 72 45.8
Actinidia17304 Actinidia chinensis HOM05D002486 ORTHO05D002606 8.0e-08 60.1 71 46.5
Cpa.g.sc51.116 Carica papaya HOM05D002486 ORTHO05D002606 8.0e-08 60.1 69 40.6
Nn2g15866 Nelumbo nucifera HOM05D002486 ORTHO05D002606 1.0e-07 59.7 73 43.8
Sabra13G0051700 Salix brachista HOM05D002486 ORTHO05D002606 1.0e-07 59.7 70 41.4
DCAR_013687 Daucus carota HOM05D002486 ORTHO05D002606 1.8e-07 58.9 68 38.2
Sabra19G0045000 Salix brachista HOM05D002486 ORTHO05D002606 1.8e-07 58.9 71 40.8
Actinidia38614 Actinidia chinensis HOM05D002486 ORTHO05D002606 2.3e-07 58.5 71 45.1
Gohir.D11G310500 Gossypium hirsutum HOM05D002486 ORTHO05D002606 2.3e-07 58.5 70 41.4
CSS0015391 Camellia sinensis var. sinensis HOM05D002486 ORTHO05D002606 4.0e-07 57.8 73 46.6
CAN.G1001.29 Capsicum annuum HOM05D002486 ORTHO05D002606 4.0e-07 57.8 64 46.9
Sabra19G0042700 Salix brachista HOM05D002486 ORTHO05D002606 5.2e-07 57.4 71 40.8
THA.LOC104827276 Tarenaya hassleriana HOM05D002486 ORTHO05D002606 5.2e-07 57.4 61 41.0
TPR.G9137 Trifolium pratense HOM05D002486 ORTHO05D002606 5.2e-07 57.4 72 43.1
TWI32G0446 Tripterygium wilfordii HOM05D002486 ORTHO05D002606 5.2e-07 57.4 68 44.1
TAR623G1300 Trochodendron aralioides HOM05D002486 ORTHO05D002606 5.2e-07 57.4 71 40.8
EL10Ac3g06824 Beta vulgaris HOM05D002486 ORTHO05D002606 6.7e-07 57.0 73 42.5
Nitab4.5_0000394g0010 Nicotiana tabacum HOM05D002486 ORTHO05D002606 6.7e-07 57.0 82 41.5
Hund19234 Selenicereus undatus HOM05D002486 ORTHO05D002606 1.2e-06 56.2 76 42.1
arahy.Tifrunner.gnm1.ann1.CLS04B Arachis hypogaea HOM05D002486 ORTHO05D002606 1.5e-06 55.8 69 42.0
arahy.Tifrunner.gnm1.ann1.GK9JFI Arachis hypogaea HOM05D002486 ORTHO05D002606 1.5e-06 55.8 69 42.0
Phvul.001G110700 Phaseolus vulgaris HOM05D002486 ORTHO05D002606 2.0e-06 55.5 69 42.0
CARHR194910 Cardamine hirsuta HOM05D002486 ORTHO05D002606 2.6e-06 55.1 61 44.3
Ca_08265_v3 Cicer arietinum L. HOM05D002486 ORTHO05D002606 2.6e-06 55.1 69 39.1
BolC2t06881H Brassica oleracea HOM05D002486 ORTHO05D002606 3.3e-06 54.7 64 43.8
DCAR_019877 Daucus carota HOM05D002486 ORTHO05D002606 3.3e-06 54.7 60 45.0
Sc06g0000380 Simmondsia chinensis HOM05D002486 ORTHO05D002606 3.3e-06 54.7 77 40.3
vmacro09139 Vaccinium macrocarpon HOM05D002486 ORTHO05D002606 3.3e-06 54.7 30 70.0
AUR62032050 Chenopodium quinoa HOM05D002486 ORTHO05D002606 4.4e-06 54.3 74 43.2
AUR62032697 Chenopodium quinoa HOM05D002486 ORTHO05D002606 4.4e-06 54.3 74 43.2
Nitab4.5_0000626g0060 Nicotiana tabacum HOM05D002486 ORTHO05D002606 4.4e-06 54.3 75 42.7
PGR042G1972 Punica granatum HOM05D002486 ORTHO05D002606 4.4e-06 54.3 71 39.4
Haze_19449 Corylus avellana HOM05D002486 ORTHO05D002606 5.7e-06 53.9 69 43.5
Manes.08G144400 Manihot esculenta HOM05D002486 ORTHO05D002606 5.7e-06 53.9 64 45.3
Migut.J01886 Erythranthe guttata HOM05D002486 ORTHO05D002606 7.5e-06 53.5 74 37.8
Lj1g0009743 Lotus japonicus HOM05D002486 ORTHO05D002606 7.5e-06 53.5 69 46.4
THA.LOC104820773 Tarenaya hassleriana HOM05D002486 ORTHO05D002606 7.5e-06 53.5 60 38.3
Haze_19420 Corylus avellana HOM05D002486 ORTHO05D002606 9.7e-06 53.1 69 43.5
Eucgr.A02098 Eucalyptus grandis HOM05D002486 ORTHO05D002606 9.7e-06 53.1 72 41.7
Lalb_Chr06g0173991 Lupinus albus HOM05D002486 ORTHO05D002606 9.7e-06 53.1 58 48.3


User provided reference genes

Program Settings