Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G6079 Erigeron canadensis HOM05D000425 ORTHO05D188283 8.4e-82 307.0 157 100.0
CSS0030057 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 1.3e-10 70.5 157 32.5
BcaB01g06217 Brassica carinata HOM05D000425 ORTHO05D000373 2.5e-09 66.2 147 29.3
CSS0032834 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 3.3e-09 65.9 148 31.1
Carub.0005s2143 Capsella rubella HOM05D000425 ORTHO05D000373 3.3e-09 65.9 148 30.4
DCAR_012109 Daucus carota HOM05D000425 ORTHO05D000373 4.3e-09 65.5 148 29.7
SMO334G0096 Selaginella moellendorffii HOM05D000425 ORTHO05D000373 4.3e-09 65.5 151 29.8
Prupe.2G209900 Prunus persica HOM05D000425 ORTHO05D000373 5.6e-09 65.1 150 32.0
Gohir.A05G294300 Gossypium hirsutum HOM05D000425 ORTHO05D000373 9.5e-09 64.3 139 32.4
Gohir.D05G294800 Gossypium hirsutum HOM05D000425 ORTHO05D000373 9.5e-09 64.3 139 32.4
Gorai.009G311500 Gossypium raimondii HOM05D000425 ORTHO05D000373 9.5e-09 64.3 139 32.4
Lsat_1_v5_gn_9_33501 Lactuca sativa HOM05D000425 ORTHO05D000373 9.5e-09 64.3 148 26.4
CARHR083700 Cardamine hirsuta HOM05D000425 ORTHO05D000373 1.2e-08 63.9 139 30.2
Migut.F01963 Erythranthe guttata HOM05D000425 ORTHO05D000373 1.2e-08 63.9 139 33.1
TAR633G2021 Trochodendron aralioides HOM05D000425 ORTHO05D000373 1.2e-08 63.9 151 30.5
Thhalv10010278m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 1.6e-08 63.5 166 27.7
SMO165G0088 Selaginella moellendorffii HOM05D000425 ORTHO05D000373 1.6e-08 63.5 153 28.1
THA.LOC104816260 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 1.6e-08 63.5 145 29.7
Thecc.10G080300 Theobroma cacao HOM05D000425 ORTHO05D000373 1.6e-08 63.5 139 32.4
Aqoxy1G01173_Aqoxy1G01174 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 2.1e-08 63.2 151 29.8
Gohir.A10G204200 Gossypium hirsutum HOM05D000425 ORTHO05D000373 2.1e-08 63.2 139 31.7
Gohir.D10G212100 Gossypium hirsutum HOM05D000425 ORTHO05D000373 2.1e-08 63.2 139 31.7
Gorai.011G238000 Gossypium raimondii HOM05D000425 ORTHO05D000373 2.1e-08 63.2 139 31.7
Zm00001eb087950 Zea mays HOM05D000425 ORTHO05D000373 2.1e-08 63.2 148 28.4
AT5G02180 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 2.8e-08 62.8 145 30.3
MSTRG.384 Avicennia marina HOM05D000425 ORTHO05D000373 2.8e-08 62.8 117 33.3
Duzib114G0694 Durio zibethinus HOM05D000425 ORTHO05D000373 2.8e-08 62.8 139 31.7
Os12g0574000 Oryza sativa ssp. japonica HOM05D000425 ORTHO05D000373 2.8e-08 62.8 148 29.1
PGR044G0567 Punica granatum HOM05D000425 ORTHO05D000373 2.8e-08 62.8 151 29.8
Sp5g07590 Schrenkiella parvula HOM05D000425 ORTHO05D000373 2.8e-08 62.8 148 29.7
AL6G11410 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 3.6e-08 62.4 145 29.7
BraA03t09448Z Brassica rapa HOM05D000425 ORTHO05D000373 3.6e-08 62.4 147 27.9
Carub.0006s0101 Capsella rubella HOM05D000425 ORTHO05D000373 3.6e-08 62.4 147 27.2
Migut.F01722 Erythranthe guttata HOM05D000425 ORTHO05D000373 3.6e-08 62.4 151 29.8
Eucgr.J01066 Eucalyptus grandis HOM05D000425 ORTHO05D000373 3.6e-08 62.4 136 30.9
FAN14G1970 Fragaria x ananassa HOM05D000425 ORTHO05D000373 3.6e-08 62.4 151 29.8
Nitab4.5_0005100g0060 Nicotiana tabacum HOM05D000425 ORTHO05D000373 3.6e-08 62.4 141 29.1
BcaC01g04229 Brassica carinata HOM05D000425 ORTHO05D000373 4.7e-08 62.0 146 27.4
BolC3t16635H Brassica oleracea HOM05D000425 ORTHO05D000373 4.7e-08 62.0 146 27.4
CSS0002138 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 4.7e-08 62.0 151 29.8
CSS0006346 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 4.7e-08 62.0 163 28.8
Thecc.10G080000 Theobroma cacao HOM05D000425 ORTHO05D000373 4.7e-08 62.0 151 29.8
AL6G11400 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 6.1e-08 61.6 147 26.5
AT5G02170 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 6.1e-08 61.6 147 25.9
A03p00570 Brassica napus HOM05D000425 ORTHO05D000373 6.1e-08 61.6 147 26.5
A03p00580 Brassica napus HOM05D000425 ORTHO05D000373 6.1e-08 61.6 147 27.9
C03p43670 Brassica napus HOM05D000425 ORTHO05D000373 6.1e-08 61.6 146 27.4
CANSAT35G0074 Cannabis sativa HOM05D000425 ORTHO05D000373 6.1e-08 61.6 163 27.6
CARHR211180 Cardamine hirsuta HOM05D000425 ORTHO05D000373 6.1e-08 61.6 145 29.0
Dinv36404 Davidia involucrata HOM05D000425 ORTHO05D000373 6.1e-08 61.6 151 27.8
Dinv37152 Davidia involucrata HOM05D000425 ORTHO05D000373 6.1e-08 61.6 149 27.5
Duzib128G1117 Durio zibethinus HOM05D000425 ORTHO05D000373 6.1e-08 61.6 151 29.8
FvH4_6g13370 Fragaria vesca HOM05D000425 ORTHO05D000373 6.1e-08 61.6 151 29.1
FAN02G1306 Fragaria x ananassa HOM05D000425 ORTHO05D000373 6.1e-08 61.6 151 29.1
Potri.010G226000 Populus trichocarpa HOM05D000425 ORTHO05D000373 6.1e-08 61.6 151 28.5
Sabra10G0174200 Salix brachista HOM05D000425 ORTHO05D000373 6.1e-08 61.6 151 28.5
Sc23g0004910 Simmondsia chinensis HOM05D000425 ORTHO05D000373 6.1e-08 61.6 139 31.7
A03p36020 Brassica napus HOM05D000425 ORTHO05D000373 8.0e-08 61.2 146 27.4
C03p00850 Brassica napus HOM05D000425 ORTHO05D000373 8.0e-08 61.2 147 27.9
BraA03t12774Z Brassica rapa HOM05D000425 ORTHO05D000373 8.0e-08 61.2 146 27.4
CARHR211190 Cardamine hirsuta HOM05D000425 ORTHO05D000373 8.0e-08 61.2 147 26.5
Duzib106G1167 Durio zibethinus HOM05D000425 ORTHO05D000373 8.0e-08 61.2 152 30.3
Lsat_1_v5_gn_2_112901 Lactuca sativa HOM05D000425 ORTHO05D000373 8.0e-08 61.2 147 30.6
Solyc11g008440.3 Solanum lycopersicum HOM05D000425 ORTHO05D000373 8.0e-08 61.2 151 28.5
Sopen11g004230 Solanum pennellii HOM05D000425 ORTHO05D000373 8.0e-08 61.2 151 28.5
SGA_v2.0_scaffold62G21395 Striga asiatica HOM05D000425 ORTHO05D000373 8.0e-08 61.2 139 30.2
ATR0559G141 Amborella trichopoda HOM05D000425 ORTHO05D000373 1.0e-07 60.8 158 27.8
BcaB01g06064 Brassica carinata HOM05D000425 ORTHO05D000373 1.0e-07 60.8 147 27.9
CANSAT56G4283 Cannabis sativa HOM05D000425 ORTHO05D000373 1.0e-07 60.8 140 26.4
CDE05G0235 Ceratophyllum demersum HOM05D000425 ORTHO05D000373 1.0e-07 60.8 149 29.5
Lalb_Chr03g0042381 Lupinus albus HOM05D000425 ORTHO05D000373 1.0e-07 60.8 136 30.1
Manes.07G095400 Manihot esculenta HOM05D000425 ORTHO05D000373 1.0e-07 60.8 139 30.2
Carub.0006s0102 Capsella rubella HOM05D000425 ORTHO05D000373 1.4e-07 60.5 145 29.0
Manes.10G049300 Manihot esculenta HOM05D000425 ORTHO05D000373 1.4e-07 60.5 151 30.5
Aa31LG1G22550 Aethionema arabicum HOM05D000425 ORTHO05D000373 1.8e-07 60.1 138 28.3
Gohir.D09G150050 Gossypium hirsutum HOM05D000425 ORTHO05D000373 1.8e-07 60.1 134 30.6
Mapoly0026s0021 Marchantia polymorpha HOM05D000425 ORTHO05D000373 1.8e-07 60.1 155 26.5
Medtr7g062430 Medicago truncatula HOM05D000425 ORTHO05D000373 1.8e-07 60.1 140 30.7
ECA238G4802 Erigeron canadensis HOM05D000425 ORTHO05D000373 2.3e-07 59.7 145 29.7
FAN05G3060 Fragaria x ananassa HOM05D000425 ORTHO05D000373 2.3e-07 59.7 151 28.5
Gorai.006G171300 Gossypium raimondii HOM05D000425 ORTHO05D000373 2.3e-07 59.7 134 30.6
Sp3g07720 Schrenkiella parvula HOM05D000425 ORTHO05D000373 2.3e-07 59.7 151 27.2
CAN.G321.40 Capsicum annuum HOM05D000425 ORTHO05D000373 3.0e-07 59.3 152 29.6
Nitab4.5_0000770g0160 Nicotiana tabacum HOM05D000425 ORTHO05D000373 3.0e-07 59.3 134 29.1
PSO063G3625 Papaver somniferum HOM05D000425 ORTHO05D000373 3.0e-07 59.3 151 26.5
PSO339G4452 Papaver somniferum HOM05D000425 ORTHO05D000373 3.0e-07 59.3 151 26.5
RcHm_v2.0_Chr3g0466251 Rosa chinensis HOM05D000425 ORTHO05D000373 3.0e-07 59.3 148 27.7
Sed0010197 Sechium edule HOM05D000425 ORTHO05D000373 3.0e-07 59.3 151 27.2
Zm00001eb136330 Zea mays HOM05D000425 ORTHO05D000373 3.0e-07 59.3 148 29.1
Thhalv10020500m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 4.0e-07 58.9 139 27.3
Gohir.A09G154400 Gossypium hirsutum HOM05D000425 ORTHO05D000373 4.0e-07 58.9 134 30.6
CARHR133890 Cardamine hirsuta HOM05D000425 ORTHO05D000373 5.2e-07 58.5 155 26.5
MELO3C019816.2 Cucumis melo HOM05D000425 ORTHO05D000373 5.2e-07 58.5 151 27.2
HanXRQChr17g0535941 Helianthus annuus HOM05D000425 ORTHO05D000373 5.2e-07 58.5 142 28.2
Phvul.007G097200 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 5.2e-07 58.5 142 28.9
ClCG08G007640 Citrullus lanatus HOM05D000425 ORTHO05D000373 6.8e-07 58.2 151 27.8
Thhalv10013167m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 6.8e-07 58.2 145 28.3
Peaxi162Scf00286g00327 Petunia axillaris HOM05D000425 ORTHO05D007728 6.8e-07 58.2 159 28.9
Psat6g181960 Pisum sativum HOM05D000425 ORTHO05D000373 6.8e-07 58.2 157 28.7
MSTRG.26157 Avicennia marina HOM05D000425 ORTHO05D000373 8.9e-07 57.8 140 28.6
CARHR164780 Cardamine hirsuta HOM05D000425 ORTHO05D000373 8.9e-07 57.8 145 30.3
Aqoxy2G02278 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 1.2e-06 57.4 155 27.7
BcaB01g00156 Brassica carinata HOM05D000425 ORTHO05D000373 1.2e-06 57.4 146 31.5
Ciclev10011256m.g Citrus clementina HOM05D000425 ORTHO05D000373 1.2e-06 57.4 142 28.9
Glyma.20G181900 Glycine max HOM05D000425 ORTHO05D000373 1.2e-06 57.4 157 28.7
Psat3g137880 Pisum sativum HOM05D000425 ORTHO05D000373 1.2e-06 57.4 140 30.0
Potri.008G036300 Populus trichocarpa HOM05D000425 ORTHO05D000373 1.2e-06 57.4 117 32.5
THA.LOC104825222 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 1.2e-06 57.4 115 33.0
BcaC07g39779 Brassica carinata HOM05D000425 ORTHO05D000373 1.5e-06 57.0 146 31.5
A09p47760 Brassica napus HOM05D000425 ORTHO05D000373 1.5e-06 57.0 146 31.5
Ca_10549_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 1.5e-06 57.0 157 28.0
Lsat_1_v5_gn_3_52181 Lactuca sativa HOM05D000425 ORTHO05D000373 1.5e-06 57.0 115 28.7
Peaxi162Scf00094g01012 Petunia axillaris HOM05D000425 ORTHO05D000373 1.5e-06 57.0 145 26.9
PGR142G2295 Punica granatum HOM05D000425 ORTHO05D000373 1.5e-06 57.0 138 26.1
QL07p048897 Quercus lobata HOM05D000425 ORTHO05D000373 1.5e-06 57.0 142 26.1
Sed0022938 Sechium edule HOM05D000425 ORTHO05D000373 1.5e-06 57.0 151 26.5
C08p29990 Brassica napus HOM05D000425 ORTHO05D000373 2.0e-06 56.6 146 30.8
Carub.0003s0845 Capsella rubella HOM05D000425 ORTHO05D000373 2.0e-06 56.6 146 27.4
CiPaw.10G040100 Carya illinoinensis HOM05D000425 ORTHO05D000373 2.0e-06 56.6 151 26.5
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 2.0e-06 56.6 151 27.2
Sed0017499 Sechium edule HOM05D000425 ORTHO05D000373 2.0e-06 56.6 139 28.8
THA.LOC104816261 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 2.0e-06 56.6 143 27.3
Zm00001eb029450 Zea mays HOM05D000425 ORTHO05D000373 2.0e-06 56.6 142 27.5
Actinidia26483 Actinidia chinensis HOM05D000425 ORTHO05D000373 2.6e-06 56.2 112 30.4
A10p33430 Brassica napus HOM05D000425 ORTHO05D000373 2.6e-06 56.2 145 26.9
Ciclev10031131m.g Citrus clementina HOM05D000425 ORTHO05D000373 2.6e-06 56.2 157 27.4
Os02g0101000 Oryza sativa ssp. japonica HOM05D000425 ORTHO05D000373 2.6e-06 56.2 150 23.3
PGR142G1800 Punica granatum HOM05D000425 ORTHO05D000373 2.6e-06 56.2 146 25.3
Sp4g21480 Schrenkiella parvula HOM05D000425 ORTHO05D000373 2.6e-06 56.2 120 30.8
Solyc10g084830.2 Solanum lycopersicum HOM05D000425 ORTHO05D000373 2.6e-06 56.2 138 26.8
Zm00001eb278120 Zea mays HOM05D000425 ORTHO05D000373 2.6e-06 56.2 147 29.3
BraA10t45373Z Brassica rapa HOM05D000425 ORTHO05D000373 3.4e-06 55.8 145 26.9
ECA228G0001 Erigeron canadensis HOM05D000425 ORTHO05D000373 3.4e-06 55.8 113 27.4
Lj6g0013335 Lotus japonicus HOM05D000425 ORTHO05D000373 3.4e-06 55.8 135 31.1
Nn2g11172 Nelumbo nucifera HOM05D000425 ORTHO05D000373 3.4e-06 55.8 140 26.4
Sp6g40260 Schrenkiella parvula HOM05D000425 ORTHO05D000373 3.4e-06 55.8 145 27.6
Sopen10g034270 Solanum pennellii HOM05D000425 ORTHO05D000373 3.4e-06 55.8 138 26.8
AT3G09340 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 4.4e-06 55.5 140 28.6
BolC9t60167H Brassica oleracea HOM05D000425 ORTHO05D000373 4.4e-06 55.5 145 26.2
Duzib093G1924 Durio zibethinus HOM05D000425 ORTHO05D000373 4.4e-06 55.5 149 28.2
Thhalv10016467m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 4.4e-06 55.5 144 28.5
Glyma.19G130500 Glycine max HOM05D000425 ORTHO05D000373 4.4e-06 55.5 152 26.3
Gohir.A04G083400 Gossypium hirsutum HOM05D000425 ORTHO05D000373 4.4e-06 55.5 145 28.3
Gohir.D04G122100 Gossypium hirsutum HOM05D000425 ORTHO05D000373 4.4e-06 55.5 145 28.3
Gorai.012G105000 Gossypium raimondii HOM05D000425 ORTHO05D000373 4.4e-06 55.5 145 28.3
PSO063G2924 Papaver somniferum HOM05D000425 ORTHO05D000373 4.4e-06 55.5 149 25.5
PSO339G5781 Papaver somniferum HOM05D000425 ORTHO05D000373 4.4e-06 55.5 149 26.8
Sabra08G0024400 Salix brachista HOM05D000425 ORTHO05D000373 4.4e-06 55.5 117 31.6
C09p74330 Brassica napus HOM05D000425 ORTHO05D000373 5.8e-06 55.1 145 26.2
CAN.G324.14 Capsicum annuum HOM05D000425 ORTHO05D000373 5.8e-06 55.1 138 26.8
CsaV3_6G036610 Cucumis sativus L. HOM05D000425 ORTHO05D000373 5.8e-06 55.1 151 27.2
Lj4g0026164 Lotus japonicus HOM05D000425 ORTHO05D007728 5.8e-06 55.1 154 28.6
TWI38G1268 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 5.8e-06 55.1 151 28.5
Actinidia32438 Actinidia chinensis HOM05D000425 ORTHO05D000373 7.5e-06 54.7 176 27.8
AT2G39130 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 7.5e-06 54.7 169 27.2
Medtr1g094620 Medicago truncatula HOM05D000425 ORTHO05D000373 7.5e-06 54.7 164 29.3
Nn2g13759 Nelumbo nucifera HOM05D000425 ORTHO05D000373 7.5e-06 54.7 117 32.5
PGSC0003DMG400011068 Solanum tuberosum HOM05D000425 ORTHO05D000373 7.5e-06 54.7 138 26.8
PGSC0003DMG400021623 Solanum tuberosum HOM05D000425 ORTHO05D007728 7.5e-06 54.7 160 26.9
Thecc.05G036300 Theobroma cacao HOM05D000425 ORTHO05D000373 7.5e-06 54.7 150 28.0
AL4G36430 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 9.8e-06 54.3 120 30.0
AL92U10100 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 9.8e-06 54.3 120 30.0
FvH4_7g18870 Fragaria vesca HOM05D000425 ORTHO05D000373 9.8e-06 54.3 150 27.3
Lsat_1_v5_gn_3_52201 Lactuca sativa HOM05D000425 ORTHO05D000373 9.8e-06 54.3 116 30.2
Phvul.008G118800 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 9.8e-06 54.3 150 26.7
TWI53G1684 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 9.8e-06 54.3 151 25.8
TWI77G0985 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 9.8e-06 54.3 139 27.3


User provided reference genes

Program Settings