Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 5.5e-99 364.4 195 100.0
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 7.8e-53 211.1 185 64.9
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 3.0e-52 209.1 184 58.7
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 2.3e-49 199.5 184 56.0
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 6.8e-49 198.0 185 53.5
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 1.5e-48 196.8 198 53.0
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 9.9e-48 194.1 184 52.7
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 3.7e-47 192.2 187 55.1
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 7.1e-46 188.0 189 54.5
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 9.2e-46 187.6 185 51.9
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 1.6e-45 186.8 185 50.8
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 6.0e-45 184.9 184 54.9
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 6.0e-45 184.9 184 50.5
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 1.3e-44 183.7 185 49.2
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 1.3e-44 183.7 184 50.5
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.7e-44 183.3 184 50.0
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 1.7e-44 183.3 184 53.8
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.3e-44 183.0 184 50.0
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.3e-44 183.0 184 50.0
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 3.0e-44 182.6 193 48.7
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 3.9e-44 182.2 187 52.9
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 5.1e-44 181.8 187 50.3
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 5.1e-44 181.8 184 53.3
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 8.6e-44 181.0 184 48.9
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 1.1e-43 180.6 187 51.3
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.5e-43 180.3 184 49.5
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.9e-43 179.9 184 48.4
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 5.6e-43 178.3 184 52.7
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 5.6e-43 178.3 184 51.6
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 7.3e-43 177.9 197 50.8
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 2.1e-42 176.4 183 47.5
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 2.8e-42 176.0 185 51.9
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 2.0e-40 169.9 184 50.5
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 2.6e-40 169.5 187 49.7
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 4.4e-40 168.7 200 46.5
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 5.8e-40 168.3 184 47.3
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 9.9e-40 167.5 186 47.3
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 2.9e-39 166.0 191 47.1
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 3.8e-39 165.6 184 49.5
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 6.4e-39 164.9 190 46.3
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 8.4e-39 164.5 184 47.8
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 1.9e-38 163.3 185 48.6
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 3.2e-38 162.5 190 45.3
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 9.2e-38 161.0 193 48.2
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 1.2e-37 160.6 184 46.2
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 6.0e-37 158.3 184 42.4
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 2.3e-36 156.4 184 42.4
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 8.6e-36 154.5 185 45.9
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 1.9e-35 153.3 184 42.4
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 4.3e-35 152.1 257 37.0
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 2.8e-34 149.4 184 41.8
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.8e-34 149.4 184 39.7
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 3.6e-34 149.1 184 40.8
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 4.0e-33 145.6 184 39.1
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 1.3e-31 140.6 184 39.7
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 2.9e-31 139.4 184 41.8
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 3.8e-31 139.0 185 38.9
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 3.3e-27 125.9 184 41.8
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 1.3e-26 124.0 179 37.4
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 1.1e-25 120.9 189 38.6
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 4.0e-25 119.0 184 32.6
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 4.0e-25 119.0 142 45.8
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 4.5e-24 115.5 97 57.7
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 4.5e-24 115.5 184 32.1
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 6.4e-23 111.7 190 36.8
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 8.4e-23 111.3 184 31.0
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 8.4e-23 111.3 184 31.0
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 1.4e-22 110.5 184 31.5
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.4e-22 109.8 90 58.9
QL07p034201 Quercus lobata HOM05D004264 ORTHO05D004680 6.0e-21 105.1 96 58.3
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 7.9e-21 104.8 183 32.2
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 3.9e-20 102.4 190 28.9
HanXRQChr02g0036821 Helianthus annuus HOM05D004264 ORTHO05D004680 5.1e-20 102.1 61 80.3
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 6.7e-20 101.7 189 35.4
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 8.7e-20 101.3 189 35.4
C03p43950 Brassica napus HOM05D004264 ORTHO05D004680 4.3e-19 99.0 184 35.3
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 4.3e-19 99.0 85 52.9
HanXRQChr13g0390251 Helianthus annuus HOM05D004264 ORTHO05D004680 4.3e-19 99.0 61 78.7
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 7.4e-19 98.2 184 35.3
Haze_21059 Corylus avellana HOM05D004264 ORTHO05D004680 7.4e-19 98.2 93 53.8
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 7.4e-19 98.2 93 58.1
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 9.6e-19 97.8 85 51.8
Sc09g0006620 Simmondsia chinensis HOM05D004264 ORTHO05D004680 1.6e-18 97.1 166 39.8
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 3.7e-18 95.9 93 58.1
RcHm_v2.0_Chr3g0462181 Rosa chinensis HOM05D004264 ORTHO05D004680 1.4e-17 94.0 92 51.1
Zm00001eb423320 Zea mays HOM05D004264 ORTHO05D004680 1.8e-17 93.6 154 37.7
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 3.1e-17 92.8 73 63.0
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 4.0e-17 92.4 90 46.7
FvH4_6g10920 Fragaria vesca HOM05D004264 ORTHO05D004680 9.0e-17 91.3 92 51.1
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 9.0e-17 91.3 88 47.7
FAN14G2539 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.2e-16 90.9 92 50.0
PGSC0003DMG400031135 Solanum tuberosum HOM05D004264 ORTHO05D004680 2.6e-16 89.7 57 75.4
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 5.8e-16 88.6 82 51.2
GSVIVG01030301001 Vitis vinifera HOM05D004264 ORTHO05D004680 5.8e-16 88.6 93 51.6
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 2.2e-15 86.7 82 50.0
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 2.2e-15 86.7 180 33.9
Aa31LG1G23180 Aethionema arabicum HOM05D004264 ORTHO05D004680 2.9e-15 86.3 157 37.6
Eucgr.G00894 Eucalyptus grandis HOM05D004264 ORTHO05D004680 2.9e-15 86.3 93 52.7
TPR.G1155 Trifolium pratense HOM05D004264 ORTHO05D004680 2.9e-15 86.3 68 57.4
VMungo1215G3396 Vigna mungo HOM05D004264 ORTHO05D004680 3.8e-15 85.9 59 66.1
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 4.9e-15 85.5 93 49.5
vmacro20314 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 2.4e-14 83.2 96 50.0
Prupe.6G283000 Prunus persica HOM05D004264 ORTHO05D004680 5.5e-14 82.0 96 46.9
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 5.5e-14 82.0 107 43.9
Ca_07679_v3 Cicer arietinum L. HOM05D004264 ORTHO05D004680 1.6e-13 80.5 58 62.1
Oeu005191.1 Olea europaea HOM05D004264 ORTHO05D004680 2.7e-13 79.7 57 64.9
Rhsim05G0223600 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.7e-13 79.7 96 46.9
TAR209G0008 Trochodendron aralioides HOM05D004264 ORTHO05D004680 3.5e-13 79.3 99 43.4
DCAR_018676 Daucus carota HOM05D004264 ORTHO05D004680 6.0e-13 78.6 97 46.4
DCAR_018675 Daucus carota HOM05D004264 ORTHO05D004680 1.3e-12 77.4 58 65.5
SEGI_24150 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 3.0e-12 76.3 83 41.0
Cpa.g.sc120.22 Carica papaya HOM05D004264 ORTHO05D004680 6.7e-12 75.1 99 43.4
MELO3C026013.2 Cucumis melo HOM05D004264 ORTHO05D004680 2.5e-11 73.2 102 41.2
Gohir.D11G227700 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.3e-11 72.8 93 44.1
Haze_21060 Corylus avellana HOM05D004264 ORTHO05D004680 4.3e-11 72.4 113 38.1
Potri.012G107200 Populus trichocarpa HOM05D004264 ORTHO05D004680 9.6e-11 71.2 55 58.2
Gohir.D10G240300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.3e-10 70.9 93 44.1
Gorai.011G276000 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.6e-10 70.5 93 44.1
CAN.G564.4 Capsicum annuum HOM05D004264 ORTHO05D004680 2.1e-10 70.1 115 40.9
Cpa.g.sc82.40 Carica papaya HOM05D004264 ORTHO05D004680 2.1e-10 70.1 81 46.9
vmacro05245 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 2.1e-10 70.1 96 43.8
vmacro05226 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 3.7e-10 69.3 96 43.8
SMO364G0587 Selaginella moellendorffii HOM05D004264 ORTHO05D004680 6.2e-10 68.6 131 31.3
MSTRG.5553 Avicennia marina HOM05D004264 ORTHO05D004680 8.2e-10 68.2 96 40.6
Migut.J00116 Erythranthe guttata HOM05D004264 ORTHO05D004680 8.2e-10 68.2 57 59.6
Oeu041877.1 Olea europaea HOM05D004264 ORTHO05D004680 1.1e-09 67.8 53 58.5
Oeu041878.1 Olea europaea HOM05D004264 ORTHO05D004680 1.1e-09 67.8 53 58.5
unitig_88.g27662 Utricularia gibba HOM05D004264 ORTHO05D004680 1.4e-09 67.4 164 29.3
PSO782G0806 Papaver somniferum HOM05D004264 ORTHO05D004680 5.3e-09 65.5 65 49.2
AagrBONN_evm.TU.Sc2ySwM_344.2603 Anthoceros agrestis HOM05D004264 ORTHO05D004680 1.2e-08 64.3 165 27.3
Os04g0445400 Oryza sativa ssp. japonica HOM05D004264 ORTHO05D004680 2.0e-08 63.5 188 28.2
Aqoxy3G03065 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 7.6e-08 61.6 107 36.4
Gorai.004G074900 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.0e-07 61.2 120 35.0
BcaB04g18568 Brassica carinata HOM05D004264 ORTHO05D004680 2.9e-07 59.7 126 29.4
BcaC01g04201 Brassica carinata HOM05D004264 ORTHO05D004680 2.9e-07 59.7 126 29.4
Gohir.D01G029100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 8.4e-07 58.2 74 41.9
Gohir.D12G051300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 8.4e-07 58.2 74 41.9
Mapoly0057s0113 Marchantia polymorpha HOM05D004264 ORTHO05D004680 1.9e-06 57.0 95 38.9
Gohir.D04G142200 Gossypium hirsutum HOM05D004264 ORTHO05D004680 4.2e-06 55.8 74 40.5
A03p65190 Brassica napus HOM05D024600 ORTHO05D004680 5.5e-06 55.5 58 50.0


User provided reference genes

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