Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 1.6e-138 496.1 259 100.0
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 3.3e-99 365.5 259 76.4
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 5.1e-84 315.1 190 78.4
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 7.3e-83 311.2 246 67.9
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 4.8e-82 308.5 192 77.6
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 4.8e-82 308.5 196 76.0
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 8.1e-82 307.8 190 77.9
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 1.4e-81 307.0 192 77.1
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 4.0e-81 305.4 239 65.7
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 4.0e-81 305.4 190 77.4
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 4.0e-81 305.4 247 66.4
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 5.3e-81 305.1 190 77.9
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 5.3e-81 305.1 246 66.3
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 5.3e-81 305.1 195 74.9
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 6.9e-81 304.7 238 66.0
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 6.9e-81 304.7 238 66.0
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 3.4e-80 302.4 248 63.3
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 4.5e-80 302.0 241 67.2
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 1.3e-79 300.4 190 76.3
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 1.3e-79 300.4 190 76.3
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 1.3e-79 300.4 190 76.3
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 1.3e-79 300.4 190 76.3
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 1.3e-79 300.4 253 67.2
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 1.3e-79 300.4 255 63.1
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 1.7e-79 300.1 253 65.2
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.2e-79 299.7 249 65.5
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 2.9e-79 299.3 237 66.7
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 4.9e-79 298.5 190 75.8
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 4.9e-79 298.5 248 62.9
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 4.9e-79 298.5 242 64.9
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 6.4e-79 298.1 190 76.3
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 6.4e-79 298.1 255 61.6
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 8.4e-79 297.7 242 64.0
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 8.4e-79 297.7 194 77.3
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 1.1e-78 297.4 238 64.3
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 1.9e-78 296.6 250 64.0
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 2.4e-78 296.2 189 79.9
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 2.4e-78 296.2 256 62.1
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 4.2e-78 295.4 249 64.7
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 4.2e-78 295.4 252 63.1
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 7.1e-78 294.7 253 62.8
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 7.1e-78 294.7 244 65.2
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 9.3e-78 294.3 213 71.8
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 9.3e-78 294.3 212 72.6
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 1.2e-77 293.9 217 71.9
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 1.2e-77 293.9 246 63.0
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 1.6e-77 293.5 251 63.3
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 2.7e-77 292.7 194 74.2
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 3.5e-77 292.4 199 74.4
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 1.0e-76 290.8 239 63.2
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 6.7e-76 288.1 248 63.3
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 8.7e-76 287.7 227 66.5
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 8.7e-76 287.7 252 59.1
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 8.7e-76 287.7 191 75.4
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 1.5e-75 287.0 239 63.2
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 1.9e-75 286.6 248 62.9
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 2.5e-75 286.2 217 68.2
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 2.5e-75 286.2 240 62.9
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 5.6e-75 285.0 243 65.0
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 5.6e-75 285.0 196 68.4
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 5.6e-75 285.0 251 62.5
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 7.4e-75 284.6 246 65.0
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 2.8e-74 282.7 239 63.6
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 8.1e-74 281.2 199 66.8
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 8.1e-74 281.2 256 60.2
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 8.1e-74 281.2 239 65.3
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 1.8e-73 280.0 206 68.4
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 1.8e-73 280.0 245 61.2
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 2.4e-73 279.6 256 60.5
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 4.5e-72 275.4 195 71.3
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.8e-72 275.0 192 70.3
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.8e-72 275.0 192 70.3
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 5.8e-72 275.0 269 58.7
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 4.9e-71 271.9 263 58.6
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 4.2e-70 268.9 247 61.1
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 7.1e-70 268.1 262 56.1
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 9.3e-70 267.7 243 59.7
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 9.3e-70 267.7 263 56.3
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 1.6e-69 266.9 205 65.4
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.7e-69 266.2 221 63.8
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 2.7e-69 266.2 249 59.4
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 2.7e-69 266.2 272 55.1
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 2.7e-69 266.2 264 58.0
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 1.0e-68 264.2 275 55.3
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.0e-68 264.2 197 67.0
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 1.8e-68 263.5 211 64.9
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 2.3e-68 263.1 193 69.9
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 6.7e-68 261.5 197 66.5
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 6.7e-68 261.5 197 66.5
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 1.1e-67 260.8 271 53.9
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.5e-67 260.4 271 53.9
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 1.9e-67 260.0 177 73.4
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 1.9e-67 260.0 237 59.1
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 3.3e-67 259.2 269 55.0
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 1.3e-66 257.3 169 74.0
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 2.8e-66 256.1 235 56.2
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 1.4e-65 253.8 237 56.5
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 1.2e-64 250.8 255 58.4
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 1.3e-63 247.3 250 56.4
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 1.3e-63 247.3 235 57.4
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 2.2e-63 246.5 236 56.4
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 3.8e-63 245.7 177 75.7
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 1.1e-62 244.2 209 60.8
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 4.2e-62 242.3 164 76.2
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 1.8e-60 236.9 228 59.2
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 1.6e-58 230.3 187 62.0
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 1.9e-54 216.9 192 59.9
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 4.6e-53 212.2 185 56.2
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 2.5e-51 206.5 153 67.3
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 2.2e-50 203.4 273 46.9
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 3.7e-50 202.6 145 73.8
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.9e-30 137.1 113 63.7
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 1.1e-25 121.3 74 74.3
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 1.5e-22 110.9 102 59.8
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 4.1e-17 92.8 71 63.4
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 9.1e-17 91.7 158 36.7
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-16 90.1 131 43.5
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.2e-13 81.3 71 53.5
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 3.4e-11 73.2 70 58.6
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 2.7e-08 63.5 58 56.9
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 1.3e-07 61.2 94 42.6
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.9e-07 60.1 56 58.9
DCAR_003545 Daucus carota HOM05D048291 ORTHO05D175544 3.3e-06 56.6 245 24.1


User provided reference genes

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