Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5799 Erigeron canadensis HOM05D007313 ORTHO05D005299 2.2e-67 258.8 130 100.0
Lsat_1_v5_gn_8_46180 Lactuca sativa HOM05D007313 ORTHO05D005299 4.3e-15 85.1 81 63.0
Lsat_1_v5_gn_4_12541 Lactuca sativa HOM05D007313 ORTHO05D005299 2.1e-14 82.8 81 54.3
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 1.2e-12 77.0 55 70.9
ECA191G0006 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.9e-11 72.4 39 84.6
ECA234G4785 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-10 68.2 80 50.0
ECA236G1610 Erigeron canadensis HOM05D003538 ORTHO05D004376 9.3e-10 67.4 39 82.1
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 9.3e-10 67.4 88 47.7
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 7.8e-09 64.3 55 65.5
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 7.8e-09 64.3 55 65.5
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 2.3e-08 62.8 90 46.7
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 2.3e-08 62.8 76 52.6
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 3.9e-08 62.0 59 57.6
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 5.1e-08 61.6 89 47.2
Solyc04g007990.1 Solanum lycopersicum HOM05D007313 ORTHO05D005299 6.6e-08 61.2 64 53.1
Sopen04g003130 Solanum pennellii HOM05D007313 ORTHO05D005299 6.6e-08 61.2 64 53.1
PGSC0003DMG400029516 Solanum tuberosum HOM05D007313 ORTHO05D005299 1.1e-07 60.5 64 53.1
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 1.5e-07 60.1 65 55.4
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 2.5e-07 59.3 91 49.5
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 4.3e-07 58.5 53 56.6
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 4.3e-07 58.5 96 42.7
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 4.3e-07 58.5 77 50.6
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 4.3e-07 58.5 77 50.6
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 4.3e-07 58.5 77 50.6
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 7.3e-07 57.8 53 64.2
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 9.6e-07 57.4 56 62.5
BcaC05g26701 Brassica carinata HOM05D007313 ORTHO05D005299 1.3e-06 57.0 68 51.5
Duzib205G0189 Durio zibethinus HOM05D008500 ORTHO05D005299 1.6e-06 56.6 57 59.6
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 2.1e-06 56.2 96 42.7
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 2.1e-06 56.2 58 60.3
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 2.1e-06 56.2 59 52.5
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 2.8e-06 55.8 74 52.7
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 4.8e-06 55.1 58 58.6
DCAR_023578 Daucus carota HOM05D007313 ORTHO05D005299 6.2e-06 54.7 57 61.4
A08p26710 Brassica napus HOM05D007313 ORTHO05D005299 8.1e-06 54.3 60 56.7
BraA08t34617Z Brassica rapa HOM05D007313 ORTHO05D005299 8.1e-06 54.3 60 56.7
Cpa.g.sc3.366 Carica papaya HOM05D008500 ORTHO05D005299 8.1e-06 54.3 77 46.8
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 8.1e-06 54.3 74 48.6
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 8.1e-06 54.3 55 54.5


User provided reference genes

Program Settings