Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.3e-37 161.8 78 100.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 1.0e-32 145.6 76 93.4
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 7.4e-28 129.4 76 75.0
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 7.4e-28 129.4 76 75.0
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 9.7e-28 129.0 76 76.3
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.6e-27 128.3 76 75.0
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 6.3e-27 126.3 76 72.4
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 5.3e-26 123.2 77 71.4
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 1.5e-25 121.7 75 74.7
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 7.7e-25 119.4 77 70.1
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 1.0e-24 119.0 76 69.7
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.0e-24 119.0 75 72.0
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 2.2e-24 117.9 76 68.4
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 2.2e-24 117.9 76 72.4
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 2.2e-24 117.9 76 69.7
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.9e-24 117.5 73 71.2
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.9e-24 117.5 73 71.2
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 2.9e-24 117.5 76 68.4
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.9e-24 117.5 74 74.3
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 3.8e-24 117.1 77 67.5
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 6.5e-24 116.3 76 68.4
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 6.5e-24 116.3 73 69.9
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 6.5e-24 116.3 77 66.2
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 1.1e-23 115.5 76 72.4
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 1.1e-23 115.5 75 69.3
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 1.9e-23 114.8 78 70.5
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 1.9e-23 114.8 76 67.1
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 2.5e-23 114.4 76 68.4
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 2.5e-23 114.4 76 68.4
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 2.5e-23 114.4 76 68.4
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.5e-23 114.4 75 68.0
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 3.2e-23 114.0 76 68.4
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.2e-22 112.1 74 67.6
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 1.2e-22 112.1 76 69.7
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.6e-22 111.7 76 69.7
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 1.6e-22 111.7 76 65.8
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.6e-22 111.7 76 68.4
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.1e-22 111.3 76 67.1
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 2.7e-22 110.9 76 67.1
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 7.9e-22 109.4 76 64.5
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 2.3e-21 107.8 76 65.8
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 3.9e-21 107.1 76 63.2
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 6.7e-21 106.3 74 63.5
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 6.7e-21 106.3 76 67.1
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 6.7e-21 106.3 76 64.5
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 1.3e-19 102.1 120 45.0
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 3.7e-19 100.5 77 55.8
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 3.7e-19 100.5 76 63.2
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 4.8e-19 100.1 77 62.3
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 1.1e-18 99.0 77 58.4
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 3.1e-18 97.4 70 62.9
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 3.1e-18 97.4 78 62.8
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 2.5e-15 87.8 76 56.6
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 7.2e-15 86.3 57 66.7
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 2.7e-14 84.3 75 54.7
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 7.9e-14 82.8 76 53.9
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.8e-13 81.6 77 44.2
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 3.0e-13 80.9 75 52.0
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.0e-13 80.9 75 52.0
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.0e-13 80.9 75 52.0
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.0e-13 80.9 75 52.0
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 5.1e-13 80.1 75 53.3
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.0e-12 78.2 77 51.9
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 2.6e-12 77.8 76 52.6
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 9.7e-12 75.9 74 51.4
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 1.3e-11 75.5 76 48.7
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 4.8e-11 73.6 78 44.9
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 1.1e-10 72.4 45 66.7
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 2.4e-10 71.2 75 46.7
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 4.1e-10 70.5 41 73.2
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 4.1e-10 70.5 78 46.2
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 4.1e-10 70.5 43 69.8
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 5.3e-10 70.1 76 42.1
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 7.0e-10 69.7 74 45.9
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 7.0e-10 69.7 76 44.7
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 9.1e-10 69.3 74 47.3
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 1.2e-09 68.9 76 46.1
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 1.5e-09 68.6 43 69.8
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 2.0e-09 68.2 40 72.5
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 5.9e-09 66.6 76 46.1
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 5.9e-09 66.6 72 43.1
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 5.9e-09 66.6 40 70.0
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 5.9e-09 66.6 75 45.3
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 7.7e-09 66.2 76 44.7
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 7.7e-09 66.2 76 44.7
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 7.7e-09 66.2 76 44.7
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 7.7e-09 66.2 75 44.0
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 1.7e-08 65.1 76 44.7
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 1.7e-08 65.1 44 61.4
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.8e-08 63.9 72 47.2
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.8e-08 63.9 72 47.2
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.0e-08 63.5 71 46.5
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 8.5e-08 62.8 41 63.4
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 1.5e-07 62.0 71 42.3
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 3.2e-07 60.8 41 63.4
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 4.2e-07 60.5 41 63.4
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 5.5e-07 60.1 119 32.8
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 2.7e-06 57.8 40 57.5
Gohir.D02G157000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 4.7e-06 57.0 80 37.5
SMO119G0022 Selaginella moellendorffii HOM05D006287 ORTHO05D009568 4.7e-06 57.0 73 35.6
Zm00001eb151420 Zea mays HOM05D037632 ORTHO05D009568 8.0e-06 56.2 61 41.0


User provided reference genes

Program Settings