Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.8e-109 398.7 204 100.0
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 1.2e-64 250.4 226 61.1
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 7.9e-56 221.1 216 56.5
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.1e-54 217.2 225 52.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.1e-54 217.2 225 52.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 9.6e-54 214.2 225 53.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 3.1e-52 209.1 225 51.1
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 3.8e-50 202.2 167 59.3
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 4.2e-49 198.7 167 57.5
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 2.7e-48 196.1 183 54.1
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 6.0e-48 194.9 171 56.1
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 7.9e-48 194.5 184 52.7
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.1e-46 190.7 228 48.7
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 1.5e-46 190.3 225 47.6
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.5e-46 189.5 165 55.8
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.3e-46 189.1 166 56.0
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 3.3e-46 189.1 209 49.3
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 7.4e-46 188.0 165 56.4
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 2.1e-45 186.4 232 47.0
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 2.8e-45 186.0 170 55.9
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 2.4e-44 183.0 165 56.4
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.1e-44 182.6 163 51.5
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 2.6e-43 179.5 167 51.5
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 2.6e-43 179.5 193 50.3
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 2.6e-43 179.5 220 43.6
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 3.4e-43 179.1 170 52.9
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 5.9e-43 178.3 173 53.2
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 1.0e-42 177.6 200 46.0
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.7e-42 176.8 226 42.0
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 2.2e-42 176.4 165 53.3
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 2.9e-42 176.0 220 44.5
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.0e-42 175.3 200 45.0
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 5.0e-42 175.3 187 48.1
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 5.0e-42 175.3 162 53.1
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 6.5e-42 174.9 164 52.4
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.1e-41 174.1 167 49.1
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.1e-41 174.1 170 51.2
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.9e-41 173.3 212 45.3
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.9e-41 173.3 186 48.4
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 4.2e-41 172.2 165 49.7
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 9.3e-41 171.0 185 48.6
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.2e-40 170.6 186 47.8
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 1.6e-40 170.2 168 51.8
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.1e-40 169.9 229 45.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.1e-40 169.9 229 45.0
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 2.7e-40 169.5 182 49.5
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 2.7e-40 169.5 212 42.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 7.9e-40 167.9 182 48.4
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 7.9e-40 167.9 229 44.1
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 7.9e-40 167.9 205 42.0
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 7.9e-40 167.9 229 42.4
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 1.0e-39 167.5 182 48.4
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.0e-39 167.5 182 48.9
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.3e-39 167.2 186 42.5
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.3e-39 167.2 207 41.5
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 6.7e-39 164.9 186 45.2
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 6.7e-39 164.9 209 45.9
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.1e-38 164.1 182 48.9
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 4.3e-38 162.2 167 51.5
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 4.3e-38 162.2 182 48.4
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 7.4e-38 161.4 170 48.2
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 9.7e-38 161.0 217 41.9
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-37 160.2 170 48.2
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-37 160.2 170 48.2
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 2.8e-37 159.5 225 40.0
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 3.7e-37 159.1 167 50.9
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 3.7e-37 159.1 167 50.3
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.7e-37 159.1 170 47.6
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 3.7e-37 159.1 225 39.6
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 3.7e-37 159.1 200 43.5
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 8.2e-37 157.9 171 43.9
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 3.1e-36 156.0 167 49.7
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.1e-36 156.0 170 47.1
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.2e-35 154.1 113 61.1
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.5e-35 153.7 222 39.2
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.6e-35 152.9 210 38.6
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 3.4e-35 152.5 168 48.8
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.0e-34 151.0 183 42.6
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.7e-34 150.2 170 44.7
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 3.8e-34 149.1 168 47.0
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 3.8e-34 149.1 127 51.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 5.0e-34 148.7 169 45.0
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 6.5e-34 148.3 170 43.5
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 3.0e-31 139.4 228 39.0
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 4.3e-30 135.6 195 41.0
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 1.3e-29 134.0 199 40.2
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 2.8e-29 132.9 179 39.1
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.1e-28 131.0 292 31.8
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 1.2e-27 127.5 229 36.7
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.7e-26 123.6 211 36.0
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 1.0e-23 114.4 86 55.8
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 8.8e-23 111.3 91 57.1
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 5.7e-22 108.6 145 38.6
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 3.7e-21 105.9 106 45.3
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 5.3e-20 102.1 114 46.5
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 2.0e-19 100.1 121 43.8
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.7e-18 97.1 94 44.7
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 5.5e-17 92.0 116 44.0
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 7.2e-17 91.7 70 55.7
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.2e-16 90.9 74 67.6
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 7.5e-14 81.6 95 43.2
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.9e-10 69.7 78 43.6
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 5.0e-10 68.9 196 27.0
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 6.5e-10 68.6 211 25.6
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 5.2e-07 58.9 177 24.3
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 2.0e-06 57.0 68 48.5


User provided reference genes

Program Settings