Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 6.5e-164 580.9 340 100.0
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 8.1e-122 441.0 341 73.3
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 3.3e-115 419.1 361 64.3
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 4.2e-110 402.1 358 61.7
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 8.4e-103 377.9 329 66.9
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.0e-100 370.9 322 61.5
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 3.9e-100 369.0 328 64.9
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 6.6e-100 368.2 325 63.1
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 5.6e-99 365.2 328 64.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 6.9e-97 358.2 326 63.8
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 2.6e-96 356.3 327 63.0
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.4e-96 355.9 323 63.5
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.9e-94 350.1 332 63.6
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 2.4e-94 349.7 329 63.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 4.2e-94 349.0 331 64.7
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 1.2e-93 347.4 316 64.9
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 2.1e-93 346.7 316 63.6
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 4.6e-93 345.5 323 62.5
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 4.6e-93 345.5 330 65.2
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 7.9e-93 344.7 323 62.8
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 1.3e-92 344.0 326 62.9
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.8e-92 343.6 315 62.9
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 3.0e-92 342.8 327 59.9
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 3.0e-92 342.8 324 61.1
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 3.0e-92 342.8 327 62.4
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 8.7e-92 341.3 331 63.7
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-91 340.9 332 65.1
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.5e-91 340.5 323 64.7
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 4.3e-91 339.0 326 63.8
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.3e-90 337.4 332 64.2
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.6e-90 337.0 315 62.5
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 4.8e-90 335.5 326 62.3
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.2e-90 335.1 324 64.2
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 8.1e-90 334.7 324 61.1
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.1e-89 334.3 329 60.5
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 1.4e-89 334.0 327 62.4
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.8e-89 333.6 324 61.7
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 2.4e-89 333.2 324 64.5
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 3.1e-89 332.8 325 55.4
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.2e-88 330.9 325 60.6
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.5e-88 330.5 323 62.2
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 2.0e-88 330.1 324 60.8
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 7.6e-88 328.2 326 62.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.9e-87 326.2 335 60.0
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.4e-86 323.9 326 61.0
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.2e-86 322.4 326 60.1
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 5.5e-86 322.0 328 60.4
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.2e-85 320.9 337 58.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 3.5e-85 319.3 326 59.8
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.6e-85 318.9 326 59.8
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 4.3e-83 312.4 328 58.8
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 7.4e-83 311.6 354 51.7
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 7.4e-83 311.6 328 58.5
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 1.3e-82 310.8 324 55.2
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 1.6e-82 310.5 340 48.8
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 6.2e-82 308.5 332 60.2
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.4e-81 307.4 323 58.2
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.8e-81 307.0 327 60.2
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.8e-81 307.0 332 59.6
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.4e-81 306.6 320 60.0
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 5.3e-81 305.4 320 59.7
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 5.3e-81 305.4 326 58.9
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 6.9e-81 305.1 323 58.2
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 6.9e-81 305.1 335 57.3
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 9.0e-81 304.7 320 57.8
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.2e-80 304.3 320 59.1
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.6e-80 303.1 328 58.8
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 3.4e-80 302.8 330 59.4
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.0e-79 301.2 327 58.4
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.3e-79 300.8 331 56.8
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 6.5e-79 298.5 329 56.2
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 6.5e-79 298.5 323 57.9
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 8.4e-79 298.1 326 59.2
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.9e-78 297.0 327 57.2
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 9.3e-78 294.7 325 58.2
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.2e-77 294.3 320 57.8
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.2e-77 294.3 336 54.8
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.7e-77 293.1 327 58.1
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 4.6e-77 292.4 322 57.5
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 9.7e-75 284.6 330 54.8
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 9.7e-75 284.6 330 54.8
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.3e-74 284.3 331 56.2
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 2.2e-74 283.5 326 56.7
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 8.2e-74 281.6 316 57.9
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.1e-73 281.2 330 51.2
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 1.4e-73 280.8 326 58.3
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 6.9e-73 278.5 334 53.0
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.0e-72 276.9 336 44.0
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 5.5e-70 268.9 303 58.7
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 1.1e-67 261.2 321 51.7
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 1.8e-65 253.8 286 56.6
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.3e-65 252.3 327 53.2
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.3e-65 252.3 327 53.2
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 6.9e-65 251.9 317 53.3
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.2e-61 241.1 309 49.8
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 9.7e-59 231.5 168 60.7
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.3e-58 231.1 203 55.2
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.2e-58 230.3 231 48.5
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.1e-57 228.0 170 61.8
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 2.4e-57 226.9 201 54.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.1e-57 226.5 199 54.8
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 7.0e-57 225.3 206 54.4
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 1.2e-56 224.6 326 46.3
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 3.5e-56 223.0 170 58.2
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 8.5e-55 218.4 257 47.1
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 3.2e-54 216.5 316 50.0
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.6e-53 214.2 209 50.7
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.4e-49 200.3 209 48.8
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 1.1e-46 191.4 318 39.6
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 8.8e-44 181.8 201 44.8
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 5.5e-38 162.5 166 48.8
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.0e-36 158.3 186 45.2
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 7.0e-33 145.6 202 39.1
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 7.0e-33 145.6 341 40.2
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.0e-32 144.1 238 51.3
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 8.9e-28 128.6 254 30.7
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 6.4e-26 122.5 168 39.3
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.6e-24 117.9 98 59.2
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.0e-24 117.5 80 71.2
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 4.6e-24 116.3 363 31.1
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 5.0e-23 112.8 81 67.9
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.3e-22 109.8 95 58.9
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 9.5e-22 108.6 259 43.6
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 8.0e-21 105.5 84 61.9
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 6.2e-13 79.3 95 41.1
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 5.8e-11 72.8 45 68.9
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 1.7e-10 71.2 50 62.0
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 6.4e-10 69.3 54 59.3
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 1.4e-09 68.2 153 33.3
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 4.1e-09 66.6 125 32.8
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 7.3e-06 55.8 26 84.6


User provided reference genes

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