Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 8.0e-91 337.0 166 100.0
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 4.8e-43 178.3 135 67.4
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 2.2e-32 142.9 153 50.3
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 3.8e-32 142.1 166 48.8
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 6.5e-32 141.4 175 49.1
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.1e-31 140.6 154 51.9
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 1.9e-31 139.8 165 50.3
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 2.5e-31 139.4 174 47.7
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 5.5e-31 138.3 167 48.5
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 7.1e-31 137.9 165 48.5
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 7.1e-31 137.9 158 46.2
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 1.2e-30 137.1 167 48.5
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.2e-30 137.1 180 45.0
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 3.5e-30 135.6 157 51.6
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 4.6e-30 135.2 149 50.3
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 7.9e-30 134.4 166 46.4
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 1.3e-29 133.7 184 41.8
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.3e-29 133.7 180 44.4
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.3e-29 132.9 163 46.6
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 3.9e-29 132.1 187 40.6
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 3.9e-29 132.1 186 41.9
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 5.1e-29 131.7 169 47.9
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 5.1e-29 131.7 187 43.3
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 6.7e-29 131.3 164 45.1
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 8.7e-29 131.0 175 48.0
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 5.7e-28 128.3 160 46.2
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 2.1e-27 126.3 160 45.6
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 2.8e-27 125.9 164 43.9
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 3.7e-27 125.6 193 43.0
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.7e-27 125.6 176 44.3
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 3.7e-27 125.6 164 43.9
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 4.8e-27 125.2 158 48.1
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 8.2e-27 124.4 159 45.9
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 8.2e-27 124.4 163 43.6
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 8.2e-27 124.4 168 45.2
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.1e-26 124.0 191 40.8
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 1.4e-26 123.6 170 44.7
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 1.4e-26 123.6 167 44.9
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 1.8e-26 123.2 162 44.4
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 1.8e-26 123.2 173 44.5
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.8e-26 123.2 173 44.5
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 1.8e-26 123.2 112 55.4
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 1.8e-26 123.2 177 44.1
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 2.4e-26 122.9 163 46.6
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.1e-26 122.5 160 46.9
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 3.1e-26 122.5 147 50.3
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 5.3e-26 121.7 190 42.6
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 5.3e-26 121.7 165 47.3
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 6.9e-26 121.3 158 44.3
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 1.2e-25 120.6 148 43.9
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 1.2e-25 120.6 160 43.1
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 2.6e-25 119.4 155 46.5
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 5.8e-25 118.2 168 39.9
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 7.6e-25 117.9 167 40.7
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 7.6e-25 117.9 137 47.4
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 7.6e-25 117.9 146 49.3
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 7.6e-25 117.9 160 45.6
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 7.6e-25 117.9 167 41.3
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 1.0e-24 117.5 194 37.1
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 1.3e-24 117.1 163 41.1
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.3e-24 117.1 183 41.5
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 1.7e-24 116.7 157 42.7
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 1.7e-24 116.7 159 42.1
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 1.7e-24 116.7 164 39.0
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 2.9e-24 115.9 156 45.5
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 3.8e-24 115.5 161 43.5
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 8.4e-24 114.4 192 37.5
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 8.4e-24 114.4 133 47.4
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 8.4e-24 114.4 193 37.8
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 1.1e-23 114.0 136 42.6
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 1.1e-23 114.0 173 39.9
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 1.4e-23 113.6 167 41.3
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 1.4e-23 113.6 163 39.3
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.9e-23 113.2 161 42.9
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 1.9e-23 113.2 172 39.5
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 2.5e-23 112.8 160 43.1
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 3.2e-23 112.5 189 36.5
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 7.1e-23 111.3 148 43.9
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 1.2e-22 110.5 161 42.2
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.2e-22 110.5 158 38.6
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 3.5e-22 109.0 147 42.2
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 6.1e-22 108.2 180 40.6
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 1.0e-21 107.5 169 40.8
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 1.3e-21 107.1 148 42.6
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 2.3e-21 106.3 133 44.4
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 2.3e-21 106.3 124 45.2
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 3.9e-21 105.5 146 40.4
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 1.5e-20 103.6 138 42.0
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 1.9e-20 103.2 183 39.3
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 3.3e-20 102.4 162 40.1
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 9.7e-20 100.9 140 42.1
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 6.3e-19 98.2 134 44.0
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 1.4e-18 97.1 175 36.0
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 1.8e-18 96.7 130 43.8
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 9.0e-18 94.4 144 41.7
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 7.7e-17 91.3 122 51.6
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 9.4e-15 84.3 136 33.8
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.2e-14 84.0 116 44.0
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 6.1e-14 81.6 273 28.6
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 7.9e-14 81.3 122 41.0
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 1.1e-12 77.4 167 29.9
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 2.5e-12 76.3 131 39.7
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 2.2e-11 73.2 108 38.0
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 1.2e-06 57.4 60 53.3
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 1.2e-06 57.4 60 53.3
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 1.6e-06 57.0 60 43.3


User provided reference genes

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